; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G016220 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G016220
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein translocase subunit
Genome locationchr02:22107570..22112471
RNA-Seq ExpressionLsi02G016220
SyntenyLsi02G016220
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142815.1 uncharacterized protein LOC101208398 [Cucumis sativus]2.5e-7687.43Show/hide
Query:  MGLGILRSIVRPLTRISRSRPSTSVTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRLPKRRPSDKPRRKRASLRPPGPYAWVQYTPGQ
        MGLGILRSI+RPLTRISRS P +S T FPS FT +KPGFHLPS GSVRT  PWFPIANHF HSLTETRLPKRRPS KPRRKRASLRPPGPYAWV YTPGQ
Subjt:  MGLGILRSIVRPLTRISRSRPSTSVTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRLPKRRPSDKPRRKRASLRPPGPYAWVQYTPGQ

Query:  PILPNHPNEGSVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERLKELQQLEEEKKKSME
        PILPN PNEGSVKRRNEKKRIRLHRAFIM+E+KKRKAQVQEA KKKL+MRVERKMAAVARERAWA RL ELQ+LEEEKKKSME
Subjt:  PILPNHPNEGSVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERLKELQQLEEEKKKSME
XP_008466941.1 PREDICTED: uncharacterized protein LOC103504316 [Cucumis melo]1.1e-7484.7Show/hide
Query:  MGLGILRSIVRPLTRISRSRPSTSVTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRLPKRRPSDKPRRKRASLRPPGPYAWVQYTPGQ
        MGLGILRSIVRPLTRISRS P +S T FPS FT +KPGFHLPS GSVRT  PWFPI NHF HSLT+TR PKRRPS KPRR+RASL+PPGPYAWV YTPGQ
Subjt:  MGLGILRSIVRPLTRISRSRPSTSVTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRLPKRRPSDKPRRKRASLRPPGPYAWVQYTPGQ

Query:  PILPNHPNEGSVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERLKELQQLEEEKKKSME
        PILPNHPNEGSVKRRNEKKRIRLHRAFIM+E++KRKAQVQEA +KKL+MRVERKMAAVARERAWA RL ELQ+LEEEKKKSME
Subjt:  PILPNHPNEGSVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERLKELQQLEEEKKKSME
XP_022132599.1 uncharacterized protein LOC111005424 [Momordica charantia]2.1e-7585.25Show/hide
Query:  MGLGILRSIVRPLTRISRSRPSTSVTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRLPKRRPSDKPRRKRASLRPPGPYAWVQYTPGQ
        MGLG+LRS+VRPLTR  RSRPSTS+TPFP+ FTS +P FHL S GSV T+APWFPIANHF HSLT+TR PKRRPSDKPRRKRASLRPPGPYAWVQYTPG+
Subjt:  MGLGILRSIVRPLTRISRSRPSTSVTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRLPKRRPSDKPRRKRASLRPPGPYAWVQYTPGQ

Query:  PILPNHPNEGSVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERLKELQQLEEEKKKSME
        PILPN PNEGSVKRRNEKKRIRL RAFI+AEKKKRKAQ QEAKKKK+I RVERKMAAVARERAWA+RL ELQQLEEE+KKSME
Subjt:  PILPNHPNEGSVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERLKELQQLEEEKKKSME
XP_023002923.1 uncharacterized protein LOC111496683 [Cucurbita maxima]1.0e-6981.97Show/hide
Query:  MGLGILRSIVRPLTRISRSRPSTSVTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRLPKRRPSDKPRRKRASLRPPGPYAWVQYTPGQ
        MGLGILRS +RPLTR   SRP TS+TP PS FTS K GF+L S G+V T+APWFPI+NHF +SLT+TRLPKRRPSDKPRRKRASLRPPGPYAWV+YTPG+
Subjt:  MGLGILRSIVRPLTRISRSRPSTSVTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRLPKRRPSDKPRRKRASLRPPGPYAWVQYTPGQ

Query:  PILPNHPNEGSVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERLKELQQLEEEKKKSME
        PI PN PNEGSVKRRNEKKRIRL RAFI+AEKKKRKAQ+QEAKKKK+I RVERKMAAVARERAWA RL ELQQLEEEKKKSM+
Subjt:  PILPNHPNEGSVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERLKELQQLEEEKKKSME
XP_038890999.1 uncharacterized protein LOC120080411 [Benincasa hispida]5.3e-8292.9Show/hide
Query:  MGLGILRSIVRPLTRISRSRPSTSVTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRLPKRRPSDKPRRKRASLRPPGPYAWVQYTPGQ
        MGLGILRSIVRPLTRISRSRPSTS+TPFPS FTS KPGFHLPSA SVR EAPWF IANHF HSLTETR PKRRPSDKPRRKRASLRPPGPYAWV YTPG+
Subjt:  MGLGILRSIVRPLTRISRSRPSTSVTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRLPKRRPSDKPRRKRASLRPPGPYAWVQYTPGQ

Query:  PILPNHPNEGSVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERLKELQQLEEEKKKSME
        PILPNHPNEGSVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERL ELQ+LEE KKKSME
Subjt:  PILPNHPNEGSVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERLKELQQLEEEKKKSME
TrEMBL top hitse value%identityAlignment
A0A0A0KUQ0 Uncharacterized protein1.2e-7687.43Show/hide
Query:  MGLGILRSIVRPLTRISRSRPSTSVTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRLPKRRPSDKPRRKRASLRPPGPYAWVQYTPGQ
        MGLGILRSI+RPLTRISRS P +S T FPS FT +KPGFHLPS GSVRT  PWFPIANHF HSLTETRLPKRRPS KPRRKRASLRPPGPYAWV YTPGQ
Subjt:  MGLGILRSIVRPLTRISRSRPSTSVTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRLPKRRPSDKPRRKRASLRPPGPYAWVQYTPGQ

Query:  PILPNHPNEGSVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERLKELQQLEEEKKKSME
        PILPN PNEGSVKRRNEKKRIRLHRAFIM+E+KKRKAQVQEA KKKL+MRVERKMAAVARERAWA RL ELQ+LEEEKKKSME
Subjt:  PILPNHPNEGSVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERLKELQQLEEEKKKSME
A0A1S3CSD0 uncharacterized protein LOC1035043165.2e-7584.7Show/hide
Query:  MGLGILRSIVRPLTRISRSRPSTSVTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRLPKRRPSDKPRRKRASLRPPGPYAWVQYTPGQ
        MGLGILRSIVRPLTRISRS P +S T FPS FT +KPGFHLPS GSVRT  PWFPI NHF HSLT+TR PKRRPS KPRR+RASL+PPGPYAWV YTPGQ
Subjt:  MGLGILRSIVRPLTRISRSRPSTSVTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRLPKRRPSDKPRRKRASLRPPGPYAWVQYTPGQ

Query:  PILPNHPNEGSVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERLKELQQLEEEKKKSME
        PILPNHPNEGSVKRRNEKKRIRLHRAFIM+E++KRKAQVQEA +KKL+MRVERKMAAVARERAWA RL ELQ+LEEEKKKSME
Subjt:  PILPNHPNEGSVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERLKELQQLEEEKKKSME
A0A6J1BTI2 uncharacterized protein LOC1110054241.0e-7585.25Show/hide
Query:  MGLGILRSIVRPLTRISRSRPSTSVTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRLPKRRPSDKPRRKRASLRPPGPYAWVQYTPGQ
        MGLG+LRS+VRPLTR  RSRPSTS+TPFP+ FTS +P FHL S GSV T+APWFPIANHF HSLT+TR PKRRPSDKPRRKRASLRPPGPYAWVQYTPG+
Subjt:  MGLGILRSIVRPLTRISRSRPSTSVTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRLPKRRPSDKPRRKRASLRPPGPYAWVQYTPGQ

Query:  PILPNHPNEGSVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERLKELQQLEEEKKKSME
        PILPN PNEGSVKRRNEKKRIRL RAFI+AEKKKRKAQ QEAKKKK+I RVERKMAAVARERAWA+RL ELQQLEEE+KKSME
Subjt:  PILPNHPNEGSVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERLKELQQLEEEKKKSME
A0A6J1HFM5 uncharacterized protein LOC1114635165.2e-6778.14Show/hide
Query:  MGLGILRSIVRPLTRISRSRPSTSVTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRLPKRRPSDKPRRKRASLRPPGPYAWVQYTPGQ
        MGLGILRS +RPLTR   SRP TS+TP PS F S K GF+L S G+V T+APWFPI+NHF +SLT+TR PKRRPSDKPRRKRASLRPPGPYAWV+YTPG+
Subjt:  MGLGILRSIVRPLTRISRSRPSTSVTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRLPKRRPSDKPRRKRASLRPPGPYAWVQYTPGQ

Query:  PILPNHPNEGSVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERLKELQQLEEEKKKSME
        PI PN PNEGSVKRRNEKKRIR  RAFI+AEKKKR+AQ+QEA KKK+I RVERKMAAVAR+RAWA+RL ELQ+LE+EKKKSME
Subjt:  PILPNHPNEGSVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERLKELQQLEEEKKKSME
A0A6J1KV00 uncharacterized protein LOC1114966835.0e-7081.97Show/hide
Query:  MGLGILRSIVRPLTRISRSRPSTSVTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRLPKRRPSDKPRRKRASLRPPGPYAWVQYTPGQ
        MGLGILRS +RPLTR   SRP TS+TP PS FTS K GF+L S G+V T+APWFPI+NHF +SLT+TRLPKRRPSDKPRRKRASLRPPGPYAWV+YTPG+
Subjt:  MGLGILRSIVRPLTRISRSRPSTSVTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRLPKRRPSDKPRRKRASLRPPGPYAWVQYTPGQ

Query:  PILPNHPNEGSVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERLKELQQLEEEKKKSME
        PI PN PNEGSVKRRNEKKRIRL RAFI+AEKKKRKAQ+QEAKKKK+I RVERKMAAVARERAWA RL ELQQLEEEKKKSM+
Subjt:  PILPNHPNEGSVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERLKELQQLEEEKKKSME
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G51010.1 unknown protein2.7e-5265.05Show/hide
Query:  MGLGILRSIVRPLTR--ISRSRPSTSVTPFPSPFTSAKPGFHLPSAGSV-RTEAPWFPIANHFLH-SLTETRLPKRRPSDKPRRKRASLRPPGPYAWVQY
        MG G +RSI+RPL+R  +SR+  + S  PF +   +AKP       GS+     PW P+ANHF   SLT+TRLPKRRP   P+RKR+ L+PPGPYA+VQY
Subjt:  MGLGILRSIVRPLTR--ISRSRPSTSVTPFPSPFTSAKPGFHLPSAGSV-RTEAPWFPIANHFLH-SLTETRLPKRRPSDKPRRKRASLRPPGPYAWVQY

Query:  TPGQPILPNHPNEGSVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERLKELQQLEEEKKKSM
        TPGQPI  N+PNEGSVKRRN KKRI   RAFI++EKKKR+A VQEAK+KK I +VERKMAAVAR+RAWAERL ELQQLEEEKKKSM
Subjt:  TPGQPILPNHPNEGSVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERLKELQQLEEEKKKSM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCTTGGAATCCTAAGATCCATTGTTCGACCCCTTACGAGGATCTCGAGATCACGTCCCTCCACTTCCGTAACACCATTTCCATCACCTTTCACTTCCGCTAAACC
AGGTTTTCATCTCCCTTCTGCTGGTTCAGTCAGAACTGAAGCTCCTTGGTTCCCAATTGCGAACCATTTCCTCCACAGTTTGACCGAGACTCGGCTTCCGAAGAGACGGC
CCAGTGATAAACCTCGTCGTAAAAGGGCGAGCTTGAGACCCCCTGGGCCATACGCTTGGGTTCAGTATACCCCTGGCCAACCAATTCTTCCTAATCACCCGAATGAAGGA
AGCGTGAAAAGAAGAAATGAGAAGAAACGCATTAGGTTGCACCGCGCTTTTATTATGGCTGAAAAAAAGAAACGGAAAGCTCAGGTTCAAGAGGCAAAGAAGAAGAAACT
TATCATGAGGGTGGAACGAAAAATGGCTGCAGTAGCAAGGGAAAGAGCATGGGCTGAAAGATTAAAAGAACTTCAACAGCTTGAAGAAGAGAAGAAAAAATCCATGGAAT
AG
mRNA sequenceShow/hide mRNA sequence
CGAATTTTAGGTTAGTTTGAGCAATTTTAATTTATTTTTGTACCGTCCTAACGTTTTATTTTCCTTCTTTTCCAAACCCTATTCCACGTTCACCCCTTCCCTCCATTAAC
AGCTACGGCACCCCCGCCCCGCCGCCACCTGCCAGACGCAGTTTCAGCGGCTGCCGCCGTACGGTGGACTCTCAGCCTCCCGACGAACTCGCCTCCGCTACCTCCATTTC
ACACTCACTCCTTCCGAGCAATCAGAGTTACTTATCTCAGCCATCTGCTCCGTTGGTTACATCGCGCTGCTGCTCTTTTTTCAGAGCTGATTTGAAAGCCTCGAAATTTA
GGGATTCGAAAAACTACCAATTTACTCTGAAATCGAAGTCTGTGGCAGAAATGGGGCTTGGAATCCTAAGATCCATTGTTCGACCCCTTACGAGGATCTCGAGATCACGT
CCCTCCACTTCCGTAACACCATTTCCATCACCTTTCACTTCCGCTAAACCAGGTTTTCATCTCCCTTCTGCTGGTTCAGTCAGAACTGAAGCTCCTTGGTTCCCAATTGC
GAACCATTTCCTCCACAGTTTGACCGAGACTCGGCTTCCGAAGAGACGGCCCAGTGATAAACCTCGTCGTAAAAGGGCGAGCTTGAGACCCCCTGGGCCATACGCTTGGG
TTCAGTATACCCCTGGCCAACCAATTCTTCCTAATCACCCGAATGAAGGAAGCGTGAAAAGAAGAAATGAGAAGAAACGCATTAGGTTGCACCGCGCTTTTATTATGGCT
GAAAAAAAGAAACGGAAAGCTCAGGTTCAAGAGGCAAAGAAGAAGAAACTTATCATGAGGGTGGAACGAAAAATGGCTGCAGTAGCAAGGGAAAGAGCATGGGCTGAAAG
ATTAAAAGAACTTCAACAGCTTGAAGAAGAGAAGAAAAAATCCATGGAATAGATTGTGTGGTCGTGTCTTATTTTTCCATATAGACTATGAAGACTCTTATTTCCCAGTA
GCTTTCTCTTTTGCTAAAATAAACACAAATTAAAATTGTATTAATCTTCAAGAGTTGAGCCATTTTGCAAGTGCAATAGTAGATATGGGCTTCAGCATTTATCCAATGGC
GAAGGAACTGGGTTCATACGGCTGCTAGGCGAATGGTACTTGAAGGTAAAAGGATGATGATCAGTTGAGTGCAGGATAAGATGTATAAATTTAACTGCAACCGACACAGT
GACTGAATATTTTGGTATTCTCATCTACCAATCCAAGCGGGAAGTAAGGAAGTCAACCTCTTTAAAATATGGTATATGGATGAGATAATGCAACGTAGTTTGACGCTCAT
GTCGAATTAAACTAGTAATTTTTTGCTATCTGGAGACTAACCTCTCTTTGGATTGCATGGTTTAACTTGATATGATTTTAAATTGTTCTACAAGTTTTGATGTTCAAAAT
TGTAGGAATTATTATTGTTTTCCAATTAGGTTAAGTTTGAAGTGGTTTTATGCTTAAAAAAACTTTTGTTTCCAATTTTGTTGAAACTTTTTTAAATTTGC
Protein sequenceShow/hide protein sequence
MGLGILRSIVRPLTRISRSRPSTSVTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRLPKRRPSDKPRRKRASLRPPGPYAWVQYTPGQPILPNHPNEG
SVKRRNEKKRIRLHRAFIMAEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAERLKELQQLEEEKKKSME