; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G016370 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G016370
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:22233274..22238721
RNA-Seq ExpressionLsi02G016370
SyntenyLsi02G016370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578700.1 hypothetical protein SDJN03_23148, partial [Cucurbita argyrosperma subsp. sororia]3.9e-1653.64Show/hide
Query:  VNMVLPAIRYVGPTI----VVATAFGAPLFAPYALPPNFLVKIELHVFNLVILFELSAAGVKIQVVFLAVVHKAIDRLCAGFTDAFAFIVAGSWWGSIEF
        +NMV+ A+R V P I    V A  F AP+ APYALP +  V+IELHVFNLV  FE+SAA VK+Q  FLAV H+AID   A     +A +VA  WW S E 
Subjt:  VNMVLPAIRYVGPTI----VVATAFGAPLFAPYALPPNFLVKIELHVFNLVILFELSAAGVKIQVVFLAVVHKAIDRLCAGFTDAFAFIVAGSWWGSIEF

Query:  EGGTWEEYMG
        +GGT +E+MG
Subjt:  EGGTWEEYMG
KAG6578701.1 hypothetical protein SDJN03_23149, partial [Cucurbita argyrosperma subsp. sororia]6.6e-0871.15Show/hide
Query:  TKVKEVLCNQLDEERRQNRGGISKNDTNNCLDEDLKDSPKLVPFSA-IPTTS
        TKVKEV CNQLD+E  QNRGGI KNDTN+ LDEDL+DS  LV FSA +PT +
Subjt:  TKVKEVLCNQLDEERRQNRGGISKNDTNNCLDEDLKDSPKLVPFSA-IPTTS
KAG6578703.1 hypothetical protein SDJN03_23151, partial [Cucurbita argyrosperma subsp. sororia]6.8e-0568.89Show/hide
Query:  TKVKEVLCNQLDEERRQNRGGISKNDTNNCLDEDLKDSPKLVPFS
        TKV+EV CNQLD+E  QNRGGI KNDT + LDEDL+DS  LV  S
Subjt:  TKVKEVLCNQLDEERRQNRGGISKNDTNNCLDEDLKDSPKLVPFS
XP_023550074.1 uncharacterized protein LOC111808373 isoform X1 [Cucurbita pepo subsp. pepo]3.7e-1954.72Show/hide
Query:  VNMVLPAIRYVGPTIVVATAFGAPLFAPYALPPNFLVKIELHVFNLVILFELSAAGVKIQVVFLAVVHKAIDRLCAGFTDAFAFIVAGSWWGSIEFEGGT
        +NMV+ A+R VGP I  A  FGAP  AP+ALP + LV+IELHVFNLV +FE+SAA V++QV+FLAV H+AID   A     +  +VA  WW S E +GG 
Subjt:  VNMVLPAIRYVGPTIVVATAFGAPLFAPYALPPNFLVKIELHVFNLVILFELSAAGVKIQVVFLAVVHKAIDRLCAGFTDAFAFIVAGSWWGSIEFEGGT

Query:  WEEYMG
         +E+MG
Subjt:  WEEYMG
XP_023550075.1 uncharacterized protein LOC111808373 isoform X2 [Cucurbita pepo subsp. pepo]3.7e-1954.72Show/hide
Query:  VNMVLPAIRYVGPTIVVATAFGAPLFAPYALPPNFLVKIELHVFNLVILFELSAAGVKIQVVFLAVVHKAIDRLCAGFTDAFAFIVAGSWWGSIEFEGGT
        +NMV+ A+R VGP I  A  FGAP  AP+ALP + LV+IELHVFNLV +FE+SAA V++QV+FLAV H+AID   A     +  +VA  WW S E +GG 
Subjt:  VNMVLPAIRYVGPTIVVATAFGAPLFAPYALPPNFLVKIELHVFNLVILFELSAAGVKIQVVFLAVVHKAIDRLCAGFTDAFAFIVAGSWWGSIEFEGGT

Query:  WEEYMG
         +E+MG
Subjt:  WEEYMG
TrEMBL top hitse value%identityAlignment
A0A0A0KNV7 Uncharacterized protein5.4e-3268.52Show/hide
Query:  VNMVLPAIRYVGPTIVVATAFGAPLFAPYALPPNFLVKIELHVFNLVILFELSAAGVKIQVVFLAVVHKAIDRLCAGFTDAFAFIVAGSWWGSIEFEGGT
        +NMVLPA+RYVGPTI +A AF  PL AP+ALP +FLV+IE HVFNLVI  E+S AGV+IQV+FLAVVHKAIDR CAG  + FAF+VAG WWG  E EGGT
Subjt:  VNMVLPAIRYVGPTIVVATAFGAPLFAPYALPPNFLVKIELHVFNLVILFELSAAGVKIQVVFLAVVHKAIDRLCAGFTDAFAFIVAGSWWGSIEFEGGT

Query:  WEEYMGNW
         E++M +W
Subjt:  WEEYMGNW
A0A0A0KU92 Uncharacterized protein8.1e-2863.64Show/hide
Query:  VNMVLPAIRYVGPTIVVATAFGAPLFAPYALPPNFLVKIELHVFNLVILFELSAAGVKIQV--VFLAVVHKAIDRLCAGFTDAFAFIVAGSWWGSIEFEG
        +NMVLPA+RYVGPTI +A     PL AP+ALP +FLV+IELHVFN VI  ++S A V+IQ+   FLAVVHKAIDRLCAG    FA + AG WWG  E EG
Subjt:  VNMVLPAIRYVGPTIVVATAFGAPLFAPYALPPNFLVKIELHVFNLVILFELSAAGVKIQV--VFLAVVHKAIDRLCAGFTDAFAFIVAGSWWGSIEFEG

Query:  GTWEEYMGNW
        G WEE+M NW
Subjt:  GTWEEYMGNW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAGAAATGGCAATAACGAAAGTCAAAGAAGTTTTATGCAATCAGCTCGACGAAGAGAGACGCCAGAACCGTGGTGGGATCTCCAAGAACGATACTAACAATTGTCTTGA
TGAAGACCTTAAGGATTCTCCAAAACTTGTTCCCTTTTCCGCCATCCCCACGACCTCTGACACAAGCCACGTGAACATGGTACTTCCCGCAATCAGATATGTAGGACCAA
CCATTGTCGTCGCCACTGCTTTTGGTGCTCCTCTTTTTGCACCATATGCACTTCCCCCTAACTTTCTTGTGAAGATTGAACTCCACGTCTTCAATTTGGTAATTCTTTTT
GAGCTTTCGGCAGCAGGGGTGAAGATCCAAGTCGTCTTTCTTGCAGTGGTACATAAAGCCATTGATAGGCTTTGTGCAGGCTTCACAGATGCGTTTGCATTCATCGTGGC
AGGCTCTTGGTGGGGTTCTATAGAATTTGAAGGTGGAACGTGGGAAGAATATATGGGAAATTGGCTTTGTGAAGATCAAAATTGCACTTTTCACATCGGTATCGAGGCCC
AAAGCCTATTTCCTTGCAGCCATCGCAGGTGTAAGGTTTCAGGTACTTCTTCAGCTCCAGTTCATGCTTCAGGTAGGGTAAGAAAGAGCAGAGAAGAGATTTGTGAAAAT
GGGGATTGTGAAGATCGCAGGAAGGCAGAGAAGAGATTTGAGAAAGATTCCAGGCAGGAATAG
mRNA sequenceShow/hide mRNA sequence
AAAGAAATGGCAATAACGAAAGTCAAAGAAGTTTTATGCAATCAGCTCGACGAAGAGAGACGCCAGAACCGTGGTGGGATCTCCAAGAACGATACTAACAATTGTCTTGA
TGAAGACCTTAAGGATTCTCCAAAACTTGTTCCCTTTTCCGCCATCCCCACGACCTCTGACACAAGCCACGTGAACATGGTACTTCCCGCAATCAGATATGTAGGACCAA
CCATTGTCGTCGCCACTGCTTTTGGTGCTCCTCTTTTTGCACCATATGCACTTCCCCCTAACTTTCTTGTGAAGATTGAACTCCACGTCTTCAATTTGGTAATTCTTTTT
GAGCTTTCGGCAGCAGGGGTGAAGATCCAAGTCGTCTTTCTTGCAGTGGTACATAAAGCCATTGATAGGCTTTGTGCAGGCTTCACAGATGCGTTTGCATTCATCGTGGC
AGGCTCTTGGTGGGGTTCTATAGAATTTGAAGGTGGAACGTGGGAAGAATATATGGGAAATTGGCTTTGTGAAGATCAAAATTGCACTTTTCACATCGGTATCGAGGCCC
AAAGCCTATTTCCTTGCAGCCATCGCAGGTGTAAGGTTTCAGGTACTTCTTCAGCTCCAGTTCATGCTTCAGGTAGGGTAAGAAAGAGCAGAGAAGAGATTTGTGAAAAT
GGGGATTGTGAAGATCGCAGGAAGGCAGAGAAGAGATTTGAGAAAGATTCCAGGCAGGAATAGCAGAGAAGAAGAGCTTTTTGAGAAGAATGCAGGAATGGCAGTGGAGA
GATTAGAATGGAAGCTGTGGGTTTATATAATGCTATCAGAGGCAATGATTTTCAGTTCTCTCTCTCATCAACGAATTCCTCCTGGTTTGCGTTTAGTTTGACCTTAATCA
ACTCAATTCAGATAACATCAGGCACACAATCAAAATCGAAACCTATTTTCTGTGTTACAGACTTGTGTACACATTGTACACTCTACTTTTGGAATAAAAGAAAAAAGCGA
ATGCAATTCAGAAAGAAAAGGCGAAACAAAAGGCAACGAAGTTTCATGCAATCAGCTCGACGAAGAGAGACGCTAGAACCATGGTGGGATCTCCAAGAACGACACTAACA
ATGGTCTTGATGAAGACCTTAAGGATTCTCCAAAACTTGTTCCCTTTTCCGCCATCCCCACGCCCTCGTGCTTGAATTGCTTTCAGATTCACCTTCTGCAGAGCCAGTTG
TTGGTCCTGGTTGGCATTATCGGCATTGATCCGGTCTCCTCCGCTCTTGTACCATTCTTCTAAAGCCATTTCAGTGACACAAGCCACATGAACATGGTACTCCCCGCACT
CAGATATGTAGGACCAACCATTGTCGTGGCCACCGCCTTTGATGCTCTTCTTCTTGCACCACATGCACTTCCCCTGGACTTTCTTGTGGAGATTGAACTCCACATCTTCA
ATTTGGTAATTCCTGCTGAGGTTACGGCAGCAGGGGTGGAGATCCAAGTCGTCTTTCATGCAGTGGTACATAAAGCCATTGATAGGCTTTCTGCAGGCGTCGCAGTTCCG
TTTGCATTCATCGTGGCAGGCTCTTGGTGGGGTTCTAAAGAATTTGAAGGTGGAACCCGGGAAGAATTCATGGGAAACTAGTGAGTCTTGTGGAAACATACAGGCTTTGT
GAAGATCAAAATCACACTTTTCGCATCGGTATCGAGGCCCAAAACCTATTTCCTTGCAGCCATCGCAGGTGTAAGGTTTCAGGTACTTCTTCAGCTCCAGTTCATGCTTC
GGGTGGCTTGGATTACGCAACTGCATCGCCATGTCTTTGTGTTTCCTTCAAGCGAAAACAAAAAAACACCAACAAAGACAAGAGAACAATGATGGGTCGCAAGGGTAGGA
AGAGCAGAGAAGAGATTTGTGAATATGAGGATTGAGAAGATTACAGGAAGTGCAGAGAAGAGATTTAAGAAGATTAAGGCAAGAATAGCAGAGAAGAAGAGATTTTAGAA
GATTAAGGCAAGAATAGCAGAGAATAAGAGATTTGAGAAGAATGCAGGAATGGCAGTGAAGAAAGTAGAATGCAAGCTGTTGGCTTTTAAAGAAAGCAGAGGCCATGAGT
TTCAGGTAATTTCTTCAATCTTTGTGCATAGAAGAAGAAATGCATATGAATTGGAAAGAGATTTCTGAACTCTGGGTTTTGCCTATGCACAAATTCATATGAATTCGAAT
GAAATTTCTGAAAAATGTGTAAAAATCTGTTGCTTGGAAAATGTGAAGTAGTTTATGTTGTGCAAGTTAGTTGATTTGTGCGAGTAAGGGCCCAACAGCTTCTACTATTC
ATTGCCATGCACACCCATAGAAGCTTCTCAATTCTCTTCCATTCTAAGTAATATTTTATCATAGGAAAGGAGTTTTGACTGAAATTATAATATTTGAAGAAGTTGGATTT
ACTTTGTACTTTCCCAGTCCTTAACTCTAGGAACGTTATTGACTTTTTTGCCCTTTCTAAGAGAGATTAATTTTATGTCAAGGAGGTACTTCCTGTGGTTGCTATGGTTA
GGGGCTGGAATTTCTTGTATGATTCAATTGAAATTGCTCACCTTGAAGACGTTTTCGTGGGAGGTCATCTTTTCCTTCCCTTTTGATTTTCACTTTATAATTCGAATTAA
TTGAATTATCAATGAAGAGTTGACGCTTTTTCC
Protein sequenceShow/hide protein sequence
KEMAITKVKEVLCNQLDEERRQNRGGISKNDTNNCLDEDLKDSPKLVPFSAIPTTSDTSHVNMVLPAIRYVGPTIVVATAFGAPLFAPYALPPNFLVKIELHVFNLVILF
ELSAAGVKIQVVFLAVVHKAIDRLCAGFTDAFAFIVAGSWWGSIEFEGGTWEEYMGNWLCEDQNCTFHIGIEAQSLFPCSHRRCKVSGTSSAPVHASGRVRKSREEICEN
GDCEDRRKAEKRFEKDSRQE