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Lsi02G016390 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G016390
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:22240786..22241568
RNA-Seq ExpressionLsi02G016390
SyntenyLsi02G016390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022992764.1 uncharacterized protein LOC111489005 isoform X1 [Cucurbita maxima]2.8e-0935.48Show/hide
Query:  MFPPFLYHSSKAISVTQATWTWYSPHSEMYDQPPSLRLFLLHHMHFPFTFLWRLNSTSSIWFR------QHGWRSKSGLSQWNTKPLMVLVQASHFILHS
        +F   L +SS  IS+TQ+T TW    +E   Q   LR+  +  +          N    + F+      Q GWRSK   SQW T PL+  +QAS F LH 
Subjt:  MFPPFLYHSSKAISVTQATWTWYSPHSEMYDQPPSLRLFLLHHMHFPFTFLWRLNSTSSIWFR------QHGWRSKSGLSQWNTKPLMVLVQASHFILHS

Query:  SWQGSGGWNPERIHENL-VPYVKTYRLCEDQNCIFCIGIVARSLVPCSHRRVRKS
        SWQ  GG     +  NL V +V TYR C D+N  F          PC+  R + S
Subjt:  SWQGSGGWNPERIHENL-VPYVKTYRLCEDQNCIFCIGIVARSLVPCSHRRVRKS
XP_022992765.1 uncharacterized protein LOC111489005 isoform X2 [Cucurbita maxima]1.1e-0537.38Show/hide
Query:  MFPPFLYHSSKAISVTQATWTWYSPHSEMYDQPPSLRLFLLHHMHFPFTFLWRLNSTSSIWFR------QHGWRSKSGLSQWNTKPLMVLVQASHFILHS
        +F   L +SS  IS+TQ+T TW    +E   Q   LR+  +  +          N    + F+      Q GWRSK   SQW T PL+  +QAS F LH 
Subjt:  MFPPFLYHSSKAISVTQATWTWYSPHSEMYDQPPSLRLFLLHHMHFPFTFLWRLNSTSSIWFR------QHGWRSKSGLSQWNTKPLMVLVQASHFILHS

Query:  SWQGSGG
        SWQ  GG
Subjt:  SWQGSGG
TrEMBL top hitse value%identityAlignment
A0A6J1JWM4 uncharacterized protein LOC111489005 isoform X25.4e-0637.38Show/hide
Query:  MFPPFLYHSSKAISVTQATWTWYSPHSEMYDQPPSLRLFLLHHMHFPFTFLWRLNSTSSIWFR------QHGWRSKSGLSQWNTKPLMVLVQASHFILHS
        +F   L +SS  IS+TQ+T TW    +E   Q   LR+  +  +          N    + F+      Q GWRSK   SQW T PL+  +QAS F LH 
Subjt:  MFPPFLYHSSKAISVTQATWTWYSPHSEMYDQPPSLRLFLLHHMHFPFTFLWRLNSTSSIWFR------QHGWRSKSGLSQWNTKPLMVLVQASHFILHS

Query:  SWQGSGG
        SWQ  GG
Subjt:  SWQGSGG
A0A6J1JYE4 uncharacterized protein LOC111489005 isoform X11.4e-0935.48Show/hide
Query:  MFPPFLYHSSKAISVTQATWTWYSPHSEMYDQPPSLRLFLLHHMHFPFTFLWRLNSTSSIWFR------QHGWRSKSGLSQWNTKPLMVLVQASHFILHS
        +F   L +SS  IS+TQ+T TW    +E   Q   LR+  +  +          N    + F+      Q GWRSK   SQW T PL+  +QAS F LH 
Subjt:  MFPPFLYHSSKAISVTQATWTWYSPHSEMYDQPPSLRLFLLHHMHFPFTFLWRLNSTSSIWFR------QHGWRSKSGLSQWNTKPLMVLVQASHFILHS

Query:  SWQGSGGWNPERIHENL-VPYVKTYRLCEDQNCIFCIGIVARSLVPCSHRRVRKS
        SWQ  GG     +  NL V +V TYR C D+N  F          PC+  R + S
Subjt:  SWQGSGGWNPERIHENL-VPYVKTYRLCEDQNCIFCIGIVARSLVPCSHRRVRKS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCCTCCGTTCTTGTACCATTCTTCTAAAGCCATCTCAGTAACACAAGCCACATGGACATGGTACTCGCCGCACTCAGAGATGTACGACCAGCCCCCGTCTTTAAG
GCTCTTCCTCTTGCACCACATGCACTTCCCTTTCACCTTCTTGTGGAGATTGAACTCCACATCTTCGATTTGGTTTAGGCAGCATGGATGGAGATCTAAGTCAGGTTTGT
CACAGTGGAACACGAAGCCATTGATGGTTCTAGTGCAAGCATCACACTTTATTCTGCATTCCTCATGGCAGGGTTCTGGTGGGTGGAACCCGGAAAGAATTCATGAGAAT
TTGGTGCCTTATGTGAAAACATACAGGCTTTGTGAAGATCAAAATTGCATTTTTTGCATCGGTATCGTGGCCCGAAGCCTAGTTCCTTGCAGCCATCGCAGGGTAAGGAA
GAGCAGAGAAGAGATTGGGAAAATTGCTGGATGGGCGGAGATGATTGCAGGAAGGCAGAGAAGAGATTTGAGAAGATTGCAGGCAGGGATAGCAGAGAAGAAGAGAATTG
TGAATATGGAAAGAAATAATGGGAAGAGATTTTGA
mRNA sequenceShow/hide mRNA sequence
AGCCAAAGATTGTTCATGTTCGGCAATGTTTCCTCCGTTCTTGTACCATTCTTCTAAAGCCATCTCAGTAACACAAGCCACATGGACATGGTACTCGCCGCACTCAGAGA
TGTACGACCAGCCCCCGTCTTTAAGGCTCTTCCTCTTGCACCACATGCACTTCCCTTTCACCTTCTTGTGGAGATTGAACTCCACATCTTCGATTTGGTTTAGGCAGCAT
GGATGGAGATCTAAGTCAGGTTTGTCACAGTGGAACACGAAGCCATTGATGGTTCTAGTGCAAGCATCACACTTTATTCTGCATTCCTCATGGCAGGGTTCTGGTGGGTG
GAACCCGGAAAGAATTCATGAGAATTTGGTGCCTTATGTGAAAACATACAGGCTTTGTGAAGATCAAAATTGCATTTTTTGCATCGGTATCGTGGCCCGAAGCCTAGTTC
CTTGCAGCCATCGCAGGGTAAGGAAGAGCAGAGAAGAGATTGGGAAAATTGCTGGATGGGCGGAGATGATTGCAGGAAGGCAGAGAAGAGATTTGAGAAGATTGCAGGCA
GGGATAGCAGAGAAGAAGAGAATTGTGAATATGGAAAGAAATAATGGGAAGAGATTTTGA
Protein sequenceShow/hide protein sequence
MFPPFLYHSSKAISVTQATWTWYSPHSEMYDQPPSLRLFLLHHMHFPFTFLWRLNSTSSIWFRQHGWRSKSGLSQWNTKPLMVLVQASHFILHSSWQGSGGWNPERIHEN
LVPYVKTYRLCEDQNCIFCIGIVARSLVPCSHRRVRKSREEIGKIAGWAEMIAGRQRRDLRRLQAGIAEKKRIVNMERNNGKRF