; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G016430 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G016430
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:22261145..22262048
RNA-Seq ExpressionLsi02G016430
SyntenyLsi02G016430
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578700.1 hypothetical protein SDJN03_23148, partial [Cucurbita argyrosperma subsp. sororia]3.7e-1752.29Show/hide
Query:  MNMIVPTLRHVGPSIVVTT----IFKALPVAPHTLSFHLLVEIELHIFDLVTSFKVPTTWMEVQVIVFAVENEAFDGVSTSIASYNAFWVAWFWWVSKEL
        MNM+V  +R V P IV  +    +F+A  +AP+ L FHL VEIELH+F+LVT F+V   W++VQ    AVE+EA DG S S+A + A  VA FWWVS+EL
Subjt:  MNMIVPTLRHVGPSIVVTT----IFKALPVAPHTLSFHLLVEIELHIFDLVTSFKVPTTWMEVQVIVFAVENEAFDGVSTSIASYNAFWVAWFWWVSKEL

Query:  ELGTREEVM
        + GTR+E M
Subjt:  ELGTREEVM

XP_023550074.1 uncharacterized protein LOC111808373 isoform X1 [Cucurbita pepo subsp. pepo]3.0e-2754.23Show/hide
Query:  MNMIVPTLRHVGPSIVVTTIFKALPVAPHTLSFHLLVEIELHIFDLVTSFKVPTTWMEVQVIVFAVENEAFDGVSTSIASYNAFWVAWFWWVSKELELGT
        MNM+V  +R VGP I    +F A  +APH L FHLLVEIELH+F+LVT F+V   W+EVQVI  AVE+EA DG S S+A Y    VA FWWVS+EL+ G 
Subjt:  MNMIVPTLRHVGPSIVVTTIFKALPVAPHTLSFHLLVEIELHIFDLVTSFKVPTTWMEVQVIVFAVENEAFDGVSTSIASYNAFWVAWFWWVSKELELGT

Query:  REEVMINGLGSGVSTSLVKIKIAFLASVSMAKSFLFAAMAGV
        R+E M         T  V+IKIAF+ASVS A++   AA+AG+
Subjt:  REEVMINGLGSGVSTSLVKIKIAFLASVSMAKSFLFAAMAGV

XP_023550075.1 uncharacterized protein LOC111808373 isoform X2 [Cucurbita pepo subsp. pepo]3.0e-2754.23Show/hide
Query:  MNMIVPTLRHVGPSIVVTTIFKALPVAPHTLSFHLLVEIELHIFDLVTSFKVPTTWMEVQVIVFAVENEAFDGVSTSIASYNAFWVAWFWWVSKELELGT
        MNM+V  +R VGP I    +F A  +APH L FHLLVEIELH+F+LVT F+V   W+EVQVI  AVE+EA DG S S+A Y    VA FWWVS+EL+ G 
Subjt:  MNMIVPTLRHVGPSIVVTTIFKALPVAPHTLSFHLLVEIELHIFDLVTSFKVPTTWMEVQVIVFAVENEAFDGVSTSIASYNAFWVAWFWWVSKELELGT

Query:  REEVMINGLGSGVSTSLVKIKIAFLASVSMAKSFLFAAMAGV
        R+E M         T  V+IKIAF+ASVS A++   AA+AG+
Subjt:  REEVMINGLGSGVSTSLVKIKIAFLASVSMAKSFLFAAMAGV

TrEMBL top hitse value%identityAlignment
A0A0A0KNV7 Uncharacterized protein4.5e-1345.71Show/hide
Query:  MNMIVPTLRHVGPSIVVTTIFKALPVAPHTLSFHLLVEIELHIFDLVTSFKVPTTWMEVQVIVFAVENEAFDGVSTSIASYNAFWVAWFWWVSKELELGT
        MNM++P LR+VGP+I +   F    +APH L    LVEIE H+F+LV   +V T  +E+QVI  AV ++A D     +A+  AF VA  WW  +ELE GT
Subjt:  MNMIVPTLRHVGPSIVVTTIFKALPVAPHTLSFHLLVEIELHIFDLVTSFKVPTTWMEVQVIVFAVENEAFDGVSTSIASYNAFWVAWFWWVSKELELGT

Query:  REEVM
         E+ M
Subjt:  REEVM

A0A0A0KS93 Uncharacterized protein2.4e-1439.22Show/hide
Query:  EERSENHSRISNDDTNNSLDNEFQDSPKLVLPISTIPITSNSLNFFQFQL-QSQRFLSTTTATTASSTTVVVVVIPCFQSHFSNTSDMNMIVPTLRHVGP
        E R  NH R S ++TNN   N+ +D P ++ P  ++P+    LNFF+  L +SQ F              ++ V+P FQ HFS+TSDMNM+  TLR + P
Subjt:  EERSENHSRISNDDTNNSLDNEFQDSPKLVLPISTIPITSNSLNFFQFQL-QSQRFLSTTTATTASSTTVVVVVIPCFQSHFSNTSDMNMIVPTLRHVGP

Query:  SIVVTTIFKALPVAPHTLSFHLLVEIELHI-------FDLVTSFKVPTTWMEV
        SI   T F AL +AP    FH+LV+ EL         FD V S ++ TTW+++
Subjt:  SIVVTTIFKALPVAPHTLSFHLLVEIELHI-------FDLVTSFKVPTTWMEV

A0A0A0KU92 Uncharacterized protein6.7e-0941.28Show/hide
Query:  MNMIVPTLRHVGPSIVVTTIFKALPVAPHTLSFHLLVEIELHIFDLVTSFKVPTTWMEVQV--IVFAVENEAFDGVSTSIASYNAFWVAWFWWVSKELEL
        MNM++P LR+VGP+I +        +APH L    LVEIELH+F+ V   +V T  +E+Q+     AV ++A D +   +A   A   A  WW  KELE 
Subjt:  MNMIVPTLRHVGPSIVVTTIFKALPVAPHTLSFHLLVEIELHIFDLVTSFKVPTTWMEVQV--IVFAVENEAFDGVSTSIASYNAFWVAWFWWVSKELEL

Query:  GTREEVMIN
        G  EE M N
Subjt:  GTREEVMIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATCCACGAAGAAAGAAGCGAGAATCATAGTAGGATCTCCAATGACGATACTAACAACAGTCTTGATAATGAATTTCAAGATTCTCCAAAACTTGTTCTTCCCAT
ATCCACCATCCCCATAACCTCCAACAGTTTGAACTTCTTTCAGTTTCAACTTCAAAGCCAAAGATTCTTGTCCACCACCACCGCTACTACTGCTTCCTCCACCACCGTTG
TTGTTGTTGTTATACCATGCTTCCAAAGCCATTTCAGTAACACAAGCGACATGAACATGATAGTTCCTACACTCAGACATGTAGGACCATCCATTGTCGTTACCACTATC
TTTAAGGCTCTTCCTGTTGCACCACATACACTTTCCTTTCACCTTCTTGTTGAGATTGAACTTCACATCTTCGATTTGGTAACTTCTTTTAAGGTTCCAACAACATGGAT
GGAGGTCCAAGTCATCGTCTTCGCAGTGGAAAACGAAGCCTTTGATGGTGTTTCTACAAGCATCGCATCTTATAATGCATTCTGGGTGGCATGGTTTTGGTGGGTCTCTA
AGGAACTTGAACTTGGAACCAGGGAAGAAGTCATGATAAACGGACTTGGTTCCGGTGTAAGTACAAGCTTGGTGAAAATCAAAATCGCATTTTTGGCATCGGTATCGATG
GCCAAATCCTTTTTGTTTGCAGCCATGGCAGGTGTATGGTTGCGGTTAAGGGCAAACACAACAACTTGTAATGTATCAACATATTTGAGAAAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAATCCACGAAGAAAGAAGCGAGAATCATAGTAGGATCTCCAATGACGATACTAACAACAGTCTTGATAATGAATTTCAAGATTCTCCAAAACTTGTTCTTCCCAT
ATCCACCATCCCCATAACCTCCAACAGTTTGAACTTCTTTCAGTTTCAACTTCAAAGCCAAAGATTCTTGTCCACCACCACCGCTACTACTGCTTCCTCCACCACCGTTG
TTGTTGTTGTTATACCATGCTTCCAAAGCCATTTCAGTAACACAAGCGACATGAACATGATAGTTCCTACACTCAGACATGTAGGACCATCCATTGTCGTTACCACTATC
TTTAAGGCTCTTCCTGTTGCACCACATACACTTTCCTTTCACCTTCTTGTTGAGATTGAACTTCACATCTTCGATTTGGTAACTTCTTTTAAGGTTCCAACAACATGGAT
GGAGGTCCAAGTCATCGTCTTCGCAGTGGAAAACGAAGCCTTTGATGGTGTTTCTACAAGCATCGCATCTTATAATGCATTCTGGGTGGCATGGTTTTGGTGGGTCTCTA
AGGAACTTGAACTTGGAACCAGGGAAGAAGTCATGATAAACGGACTTGGTTCCGGTGTAAGTACAAGCTTGGTGAAAATCAAAATCGCATTTTTGGCATCGGTATCGATG
GCCAAATCCTTTTTGTTTGCAGCCATGGCAGGTGTATGGTTGCGGTTAAGGGCAAACACAACAACTTGTAATGTATCAACATATTTGAGAAAG
Protein sequenceShow/hide protein sequence
MEIHEERSENHSRISNDDTNNSLDNEFQDSPKLVLPISTIPITSNSLNFFQFQLQSQRFLSTTTATTASSTTVVVVVIPCFQSHFSNTSDMNMIVPTLRHVGPSIVVTTI
FKALPVAPHTLSFHLLVEIELHIFDLVTSFKVPTTWMEVQVIVFAVENEAFDGVSTSIASYNAFWVAWFWWVSKELELGTREEVMINGLGSGVSTSLVKIKIAFLASVSM
AKSFLFAAMAGVWLRLRANTTTCNVSTYLRK