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Lsi02G016460 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G016460
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEndoplasmic reticulum transmembrane protein
Genome locationchr02:22277501..22277794
RNA-Seq ExpressionLsi02G016460
SyntenyLsi02G016460
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0070973 - protein localization to endoplasmic reticulum exit site (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008417 - B-cell receptor-associated protein 29/31


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034840.1 putative bcr-associated protein, bap [Cucumis melo var. makuwa]8.5e-3182.47Show/hide
Query:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIGEL
        MIQVVLKL L+EMA+ILALLF+ P RNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNA  I  R AEGG +NQTDEILMA RLLE   IGEL
Subjt:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIGEL

KAG7033051.1 hypothetical protein SDJN02_07104 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-2976.84Show/hide
Query:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG
        MI+VV  L L+EMA+IL LLFRTPFR LI+ GLDRLKQGRGPLVV++VAATMLV+FAS LYNA +I RRTAE GF++QTDE+LMA RLLEASMIG
Subjt:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG

XP_022954156.1 uncharacterized protein LOC111456500 isoform X1 [Cucurbita moschata]7.2e-3077.89Show/hide
Query:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG
        MI+VV  L L+EMA+IL LLFRTPFR LI+ GLDRLKQGRGPLVVK+VAATMLV+FAS LYNA +I RRTAE GF++QTDE+LMA RLLEASMIG
Subjt:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG

XP_022990643.1 uncharacterized protein LOC111487467 isoform X1 [Cucurbita maxima]1.6e-2976.84Show/hide
Query:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG
        MI+VV  L L+EMA+IL LLFRTPFR LI+ GLDRLKQGRGPL+VK+VAATMLV+FAS LYNA +I RRTAE GF++QTDE+LMA RLLEASMIG
Subjt:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG

XP_031741112.1 uncharacterized protein LOC101213037 isoform X2 [Cucumis sativus]1.6e-2978.35Show/hide
Query:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIGEL
        MIQV LKL L+EMA+ILALLF+ P RNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNA  I RR AE G +NQTDEIL+A RLLE   IG +
Subjt:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIGEL

TrEMBL top hitse value%identityAlignment
A0A0A0KNS5 Endoplasmic reticulum transmembrane protein1.3e-2980Show/hide
Query:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG
        MIQV LKL L+EMA+ILALLF+ P RNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNA  I RR AE G +NQTDEIL+A RLLE   IG
Subjt:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG

A0A1S3C8X1 Endoplasmic reticulum transmembrane protein1.3e-2981.05Show/hide
Query:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG
        MIQVVLKL L+EMA+ILALLF+ P RNLIVKGLDRLKQGRGPLV KSVAATMLVVFASALYNA  I  R AEGG +NQTDEILMA RLLE   IG
Subjt:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG

A0A5D3D049 Endoplasmic reticulum transmembrane protein4.1e-3182.47Show/hide
Query:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIGEL
        MIQVVLKL L+EMA+ILALLF+ P RNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNA  I  R AEGG +NQTDEILMA RLLE   IGEL
Subjt:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIGEL

A0A6J1GQ35 Endoplasmic reticulum transmembrane protein3.5e-3077.89Show/hide
Query:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG
        MI+VV  L L+EMA+IL LLFRTPFR LI+ GLDRLKQGRGPLVVK+VAATMLV+FAS LYNA +I RRTAE GF++QTDE+LMA RLLEASMIG
Subjt:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG

A0A6J1JTW1 Endoplasmic reticulum transmembrane protein7.8e-3076.84Show/hide
Query:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG
        MI+VV  L L+EMA+IL LLFRTPFR LI+ GLDRLKQGRGPL+VK+VAATMLV+FAS LYNA +I RRTAE GF++QTDE+LMA RLLEASMIG
Subjt:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11905.1 B-cell receptor-associated protein 31-like5.2e-1843.16Show/hide
Query:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG
        M Q++  + L E+ +I+AL F+TP R L++  LDR K+GRGP+V+++V+AT++V+  +++YN   I +R  E G +N TDE++MA+ LLE++++G
Subjt:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG

AT1G11905.2 B-cell receptor-associated protein 31-like3.4e-1742.55Show/hide
Query:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMI
        M Q++  + L E+ +I+AL F+TP R L++  LDR K+GRGP+V+++V+AT++V+  +++YN   I +R  E G +N TDE++MA+ LLE++++
Subjt:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMI

AT3G20450.1 B-cell receptor-associated protein 31-like3.7e-1647.92Show/hide
Query:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAE-GGFINQTDEILMAQRLLEASMIG
        M Q++  +   E  +IL L F TP R ++VK LD  KQGR PLV K+VAATMLV+F S +++  +I  R +E GG  N TD+++ A RLLEA ++G
Subjt:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAE-GGFINQTDEILMAQRLLEASMIG

AT5G42570.1 B-cell receptor-associated 31-like6.1e-1946.32Show/hide
Query:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG
        MI ++  +  +EMA+IL LLF+TP R LI+   DR+K+GRGP+VVK++  T+ VV  S++Y+   I RR+ +G  +N TD++L ++ LLEAS++G
Subjt:  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG

AT5G48660.1 B-cell receptor-associated protein 31-like2.7e-1139.58Show/hide
Query:  MIQVVLKLALSEMAIILALLFRT-PFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG
        MIQ++  +   E AI   LL +  P R L++K LD++K G+GP  VK++A TM V+  S L +  KI  + A+ G ++  D++L    LLEAS++G
Subjt:  MIQVVLKLALSEMAIILALLFRT-PFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCAAGTTGTGTTGAAGCTTGCATTGAGCGAAATGGCCATAATTTTGGCTCTGTTGTTCAGAACTCCATTCAGAAATTTGATAGTCAAAGGATTGGACAGATTGAA
GCAGGGGAGAGGCCCTTTGGTGGTTAAGTCTGTTGCCGCCACCATGCTGGTCGTCTTTGCCTCAGCTCTTTACAATGCGACGAAAATCGGCCGACGAACGGCGGAGGGCG
GCTTCATCAACCAGACTGACGAGATTCTCATGGCGCAGCGCCTTCTCGAAGCCTCCATGATCGGTGAGCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTCAAGTTGTGTTGAAGCTTGCATTGAGCGAAATGGCCATAATTTTGGCTCTGTTGTTCAGAACTCCATTCAGAAATTTGATAGTCAAAGGATTGGACAGATTGAA
GCAGGGGAGAGGCCCTTTGGTGGTTAAGTCTGTTGCCGCCACCATGCTGGTCGTCTTTGCCTCAGCTCTTTACAATGCGACGAAAATCGGCCGACGAACGGCGGAGGGCG
GCTTCATCAACCAGACTGACGAGATTCTCATGGCGCAGCGCCTTCTCGAAGCCTCCATGATCGGTGAGCTTTAA
Protein sequenceShow/hide protein sequence
MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIGEL