; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G016470 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G016470
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCASP-like protein
Genome locationchr02:22277234..22280900
RNA-Seq ExpressionLsi02G016470
SyntenyLsi02G016470
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR006702 - Casparian strip membrane protein domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458887.1 PREDICTED: CASP-like protein 4D1 [Cucumis melo]2.5e-4984.09Show/hide
Query:  VLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKA
        VLR+LTFVFLL+SIIVL TNSKT+G+   HFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGS+LFDFYGDKVLSY LLAGAAAALGSS+DLKA
Subjt:  VLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKA

Query:  NTTFLESFFDHGNAAAALLLLAFFCSAVVVFL
        N   L SFFD GNAAAALLLLAF CSA++  L
Subjt:  NTTFLESFFDHGNAAAALLLLAFFCSAVVVFL

XP_022992769.1 CASP-like protein 4D1 [Cucurbita maxima]3.0e-4783.33Show/hide
Query:  VLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKA
        VLR+LTFVFLLISIIVL T SKTVGD    FHNVNSYR+AMATIIIGGAFNLLQIALALYRL+TKTDG +LFDF+GDKVLSY LLAGAAAALGS+IDLKA
Subjt:  VLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKA

Query:  NTTFLESFFDHGNAAAALLLLAFFCSAVVVFL
        N  +L SFFD GNAAAALLLLAF CSAVV  L
Subjt:  NTTFLESFFDHGNAAAALLLLAFFCSAVVVFL

XP_023551429.1 CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]5.2e-4783.33Show/hide
Query:  VLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKA
        VLR+LTFVFLLISIIVL T SKTVGD    FHNVNSYR+AMATIIIGGAFNLLQIALALYRL+TKTDG +LFDF+GDKVLSY LLAGAAAALGS+IDLKA
Subjt:  VLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKA

Query:  NTTFLESFFDHGNAAAALLLLAFFCSAVVVFL
        N  +L SFFD GNAAAALLLLAF CSAVV  L
Subjt:  NTTFLESFFDHGNAAAALLLLAFFCSAVVVFL

XP_031741109.1 CASP-like protein 4D1 isoform X1 [Cucumis sativus]4.0e-4781.06Show/hide
Query:  VLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKA
        VLR+L F FLLISIIVL TNSKTVG+   HFHNVNSYR+AMATII+GGAFNLLQIAL+LYRL+TKTDGS+LFDFYGDK+LSYVLLAGAAAALGSSIDLKA
Subjt:  VLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKA

Query:  NTTFLESFFDHGNAAAALLLLAFFCSAVVVFL
        N +   SFFD GNAAAALLLLAF CSA++  L
Subjt:  NTTFLESFFDHGNAAAALLLLAFFCSAVVVFL

XP_038877615.1 CASP-like protein 4D1 [Benincasa hispida]2.0e-5186.47Show/hide
Query:  MVLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLK
        +VLR++TFVFLLISIIVLATNSKT+GD  FHFHNVNSYRYA+ TIIIGGAFNLLQIALALYRLVTKTDG+LLFDFYGDKVLSYVLL+GAAAALGS IDLK
Subjt:  MVLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLK

Query:  ANTTFLESFFDHGNAAAALLLLAFFCSAVVVFL
        AN   L SFFDHGNA AALLLLAFFCSAVV  L
Subjt:  ANTTFLESFFDHGNAAAALLLLAFFCSAVVVFL

TrEMBL top hitse value%identityAlignment
A0A1S3C911 CASP-like protein1.2e-4984.09Show/hide
Query:  VLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKA
        VLR+LTFVFLL+SIIVL TNSKT+G+   HFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGS+LFDFYGDKVLSY LLAGAAAALGSS+DLKA
Subjt:  VLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKA

Query:  NTTFLESFFDHGNAAAALLLLAFFCSAVVVFL
        N   L SFFD GNAAAALLLLAF CSA++  L
Subjt:  NTTFLESFFDHGNAAAALLLLAFFCSAVVVFL

A0A6J1BZ60 CASP-like protein8.1e-3870.68Show/hide
Query:  MVLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLK
        +VLR++TFVFL ISIIVLATNS+  G++  HFHNVNSYR+AMATIIIGGAFNLLQIAL+LY +++K+ G+LLF FYGDKVLSYVLL+GAAA LG  IDL 
Subjt:  MVLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLK

Query:  ANTTFLESFFDHGNAAAALLLLAFFCSAVVVFL
        AN   + SFF  GNAAAALLL+AF CSA +  L
Subjt:  ANTTFLESFFDHGNAAAALLLLAFFCSAVVVFL

A0A6J1FMS6 CASP-like protein5.6e-4781.82Show/hide
Query:  VLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKA
        VLR+LTFVFLLISIIVL T SKTVGD    FHNVNSYR+AMATIIIGGAFNLLQIALALYRL+TK+DG +LFDF+GDKVLSY LLAGAAAALGS+IDLKA
Subjt:  VLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKA

Query:  NTTFLESFFDHGNAAAALLLLAFFCSAVVVFL
        N  +L SFFD GNAAAALLLLAF CSA+V  L
Subjt:  NTTFLESFFDHGNAAAALLLLAFFCSAVVVFL

A0A6J1JQU5 CASP-like protein5.8e-2856.3Show/hide
Query:  MVLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLK
        ++LRILTFVFL IS  VL T S+TV  V FHF+N ++YRY +ATIIIG  FNLLQIA +L+ +V    G++LFDF+GDK LSY+L  G AA  G S+DL+
Subjt:  MVLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLK

Query:  A--NTTFLESFFDHGNAAAALLLLAFFCSAVVVFL
              +  +FFD   AA+ALLL AFFCSA V  L
Subjt:  A--NTTFLESFFDHGNAAAALLLLAFFCSAVVVFL

A0A6J1JYE7 CASP-like protein1.5e-4783.33Show/hide
Query:  VLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKA
        VLR+LTFVFLLISIIVL T SKTVGD    FHNVNSYR+AMATIIIGGAFNLLQIALALYRL+TKTDG +LFDF+GDKVLSY LLAGAAAALGS+IDLKA
Subjt:  VLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKA

Query:  NTTFLESFFDHGNAAAALLLLAFFCSAVVVFL
        N  +L SFFD GNAAAALLLLAF CSAVV  L
Subjt:  NTTFLESFFDHGNAAAALLLLAFFCSAVVVFL

SwissProt top hitse value%identityAlignment
A1XGB4 CASP-like protein PIMP12.5e-2048.15Show/hide
Query:  MVLRILTFVFLLISIIVLATNSKTV----GDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKT----DGSLLFDFYGDKVLSYVLLAGAAAA
        +++RILT + LLIS IV+ATN++TV    GDV   F +  +YRY +AT+IIG A+ LLQIA ++  L T      +G LLFDFYGDK +SY L+ GAAA+
Subjt:  MVLRILTFVFLLISIIVLATNSKTV----GDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKT----DGSLLFDFYGDKVLSYVLLAGAAAA

Query:  LGSSIDLK--ANTTFLESFFDHGNAAAALLLLAFF
         G + DLK    +     F +  NAAA+L L+ FF
Subjt:  LGSSIDLK--ANTTFLESFFDHGNAAAALLLLAFF

B9NBE5 CASP-like protein 4D12.5e-2042.96Show/hide
Query:  MVLRILTFVFLLISIIVLATNSKTVGDVVFHF----HNVNSYRYAMATIIIGGAFNLLQIALALYRL------VTKTDGSLLFDFYGDKVLSYVLLAGAA
        + LR+LTF FL++S++++ TN+ T+   +  F     +  SYRY +A I  G  + +LQIAL L  +       T  DG+L+FDFYGDKV+SY+L  GAA
Subjt:  MVLRILTFVFLLISIIVLATNSKTVGDVVFHF----HNVNSYRYAMATIIIGGAFNLLQIALALYRL------VTKTDGSLLFDFYGDKVLSYVLLAGAA

Query:  AALGSSIDLKANTTFL--ESFFDHGNAAAALLLLAFFCSAVV
        AA G++ +LK     L  + FF+ G A+A+LLLL F C+A++
Subjt:  AALGSSIDLKANTTFL--ESFFDHGNAAAALLLLAFFCSAVV

B9SXY8 CASP-like protein 4D11.9e-2345.07Show/hide
Query:  MVLRILTFVFLLISIIVLATNSKTVG----DVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVT-----KTDGSLLFDFYGDKVLSYVLLAGAAA
        ++LRILTF+FL+ S+++L TN+ T+     +V  HF +V +YRY +ATI+IG A+ +LQIA  LY + T       DG+L FDF+GDKV+SY+L+ GAAA
Subjt:  MVLRILTFVFLLISIIVLATNSKTVG----DVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVT-----KTDGSLLFDFYGDKVLSYVLLAGAAA

Query:  ALGSSIDLK---ANTTFLESFFDHGNAAAALLLLAFFCSAVV
           S+ D+K   + +   ++F + G A+A+LLL+ F C+AV+
Subjt:  ALGSSIDLK---ANTTFLESFFDHGNAAAALLLLAFFCSAVV

C6T1Z6 CASP-like protein 4D15.1e-2144.85Show/hide
Query:  MVLRILTFVFLLISIIVLATNSKTVGD--VVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVT-----KTDGSLLFDFYGDKVLSYVLLAGAAAAL
        ++LR+LTFVFLLI++I++A   +T  +  V   F+++ +YRY ++TIIIG A+NLLQ+AL+++ +V+       DG  LFDF+GDK++SY+L++G+AA  
Subjt:  MVLRILTFVFLLISIIVLATNSKTVGD--VVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVT-----KTDGSLLFDFYGDKVLSYVLLAGAAAAL

Query:  GSSIDLKANTTFLESFFDHGNAAAALLLLAFFCSAV
        G +++L        SF D  NA+A+LLL+AF  +AV
Subjt:  GSSIDLKANTTFLESFFDHGNAAAALLLLAFFCSAV

Q56X75 CASP-like protein 4D26.4e-1637.93Show/hide
Query:  MVLRILTFVFLLISIIVLATNSKTV----GDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVT--KTDGSLLFDFYGDKVLSYVLLAGAAAALG
        ++LR+LT VFL+I++I+L+TNS T+      + FHF +V +YRY ++  +IG  + ++Q+   +    T  K   +   DFYGDK++SY++  G+AA  G
Subjt:  MVLRILTFVFLLISIIVLATNSKTV----GDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVT--KTDGSLLFDFYGDKVLSYVLLAGAAAALG

Query:  SSIDLK---------ANTTFLESFFDHGNAAAALLLLAFFCSAVV
         + DLK          +T  ++ FF  G A+A+LLL AF C AV+
Subjt:  SSIDLK---------ANTTFLESFFDHGNAAAALLLLAFFCSAVV

Arabidopsis top hitse value%identityAlignment
AT2G39518.1 Uncharacterised protein family (UPF0497)4.6e-1737.93Show/hide
Query:  MVLRILTFVFLLISIIVLATNSKTV----GDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVT--KTDGSLLFDFYGDKVLSYVLLAGAAAALG
        ++LR+LT VFL+I++I+L+TNS T+      + FHF +V +YRY ++  +IG  + ++Q+   +    T  K   +   DFYGDK++SY++  G+AA  G
Subjt:  MVLRILTFVFLLISIIVLATNSKTV----GDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVT--KTDGSLLFDFYGDKVLSYVLLAGAAAALG

Query:  SSIDLK---------ANTTFLESFFDHGNAAAALLLLAFFCSAVV
         + DLK          +T  ++ FF  G A+A+LLL AF C AV+
Subjt:  SSIDLK---------ANTTFLESFFDHGNAAAALLLLAFFCSAVV

AT2G39530.1 Uncharacterised protein family (UPF0497)3.3e-1537.24Show/hide
Query:  MVLRILTFVFLLISIIVLATNSKTV----GDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLL--FDFYGDKVLSYVLLAGAAAALG
        ++LR+LT  FLLI++++++TN+ T+      +   F++V +YRY ++  +IG  + ++Q+ L + +  T     L   FDFYGDKV+SY+L  G+AA  G
Subjt:  MVLRILTFVFLLISIIVLATNSKTV----GDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLL--FDFYGDKVLSYVLLAGAAAALG

Query:  SSIDLK---------ANTTFLESFFDHGNAAAALLLLAFFCSAVV
         S DLK          +T  ++ FF  G A+A+LLL AF   AV+
Subjt:  SSIDLK---------ANTTFLESFFDHGNAAAALLLLAFFCSAVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCTGAGAATTCTCACTTTTGTTTTCCTCTTAATTTCCATCATCGTTCTGGCTACCAATTCCAAAACTGTAGGAGATGTGGTGTTTCATTTCCATAATGTCAATTC
CTATAGATATGCAATGGCAACTATAATTATTGGCGGTGCATTCAACCTCTTGCAAATTGCCTTGGCCCTTTATCGTCTCGTAACCAAAACCGATGGCAGTCTTTTATTCG
ACTTCTATGGTGATAAGGTATTATCATACGTTTTGTTGGCGGGAGCGGCGGCGGCGCTGGGTTCTAGCATAGACTTGAAGGCTAATACGACGTTTTTGGAGTCGTTTTTC
GACCATGGGAACGCCGCTGCGGCTCTTCTTCTTCTTGCTTTTTTCTGTAGTGCTGTCGTTGTGTTTCTTTTGCTCACCGATCATGGAGGCTTCGAGAAGGCGCTGCGCCA
TGAGAATCTCGTCAGTCTGGTTGATGAAGCCGCCCTCCGCCGTTCGTCGGCCGATTTTCGTCGCATTGTAAAGAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCTGAGAATTCTCACTTTTGTTTTCCTCTTAATTTCCATCATCGTTCTGGCTACCAATTCCAAAACTGTAGGAGATGTGGTGTTTCATTTCCATAATGTCAATTC
CTATAGATATGCAATGGCAACTATAATTATTGGCGGTGCATTCAACCTCTTGCAAATTGCCTTGGCCCTTTATCGTCTCGTAACCAAAACCGATGGCAGTCTTTTATTCG
ACTTCTATGGTGATAAGGTATTATCATACGTTTTGTTGGCGGGAGCGGCGGCGGCGCTGGGTTCTAGCATAGACTTGAAGGCTAATACGACGTTTTTGGAGTCGTTTTTC
GACCATGGGAACGCCGCTGCGGCTCTTCTTCTTCTTGCTTTTTTCTGTAGTGCTGTCGTTGTGTTTCTTTTGCTCACCGATCATGGAGGCTTCGAGAAGGCGCTGCGCCA
TGAGAATCTCGTCAGTCTGGTTGATGAAGCCGCCCTCCGCCGTTCGTCGGCCGATTTTCGTCGCATTGTAAAGAGCTGAGGCAAAGACGACCAGCATGGTGGCGGCAACA
GACTTAACCACCAAAGGGCCTCTCCCCTGCTTCAATCTGTCCAATCCTTTGACTATCAAATTTCTGAATGGAGTTCTGAACAACAGAGCCAAAATTATGGCCATTTCGCT
CAATGCAAGCTTCAACACAACTTGAATCATCTCTACTTTCCTTTAATTTCTCGATCTTCCTTTCAAAATTTCTCTAATGCCTTCGATTTTACTAGATTCGCTTTTAAATT
AGGGCTTCCAATTTCGATCCCAGCCTTGCAGTTCTGGTTTGGTTTAAGAATTTGTACTTTTACCATACTCTCGCACCACGTTTCCTTTCCATTGTTTAATCTACATGTCA
TTTCCGGAATTAACTTTTTATTATATATTATTATTATTATTATTATTATTATTATATTACTTTCTTTACAAGTTAGT
Protein sequenceShow/hide protein sequence
MVLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKANTTFLESFF
DHGNAAAALLLLAFFCSAVVVFLLLTDHGGFEKALRHENLVSLVDEAALRRSSADFRRIVKS