; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G016720 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G016720
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionphotosynthetic NDH subunit of lumenal location 1, chloroplastic
Genome locationchr02:22509137..22511438
RNA-Seq ExpressionLsi02G016720
SyntenyLsi02G016720
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009654 - photosystem II oxygen evolving complex (cellular component)
GO:0019898 - extrinsic component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002683 - PsbP, C-terminal
IPR016123 - Mog1/PsbP, alpha/beta/alpha sandwich


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022953447.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucurbita moschata]1.9e-12494.07Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY
        MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+TI CSTERTSR E HCNRRPLLLGVGALA SL  ASPLFAEEVPKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRAYSRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

XP_022990449.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucurbita maxima]2.1e-12393.22Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY
        MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+T+ CSTERTSR E  CNRRPLLLGVGALATSL  A PLFAEEVPKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRAYSRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

XP_023534746.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]1.2e-12393.22Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY
        MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+T+ CSTERTSR E  CNRRPLLLGVGALATSL  A+PLFAEEVPKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRAYSRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

XP_038889544.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Benincasa hispida]3.7e-12897.46Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY
        MAVSTSC SWVPTTASNWKLRLLPFNEPSTAT SFSSCSTINCSTE+TSREEGHCNRRPLLLGVGALATSLL ASPLFAEEVPKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRA+SRTSFATIAI
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

XP_038889545.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 [Benincasa hispida]3.4e-12697.03Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY
        MAVSTSC SWVPTTASNWKLRLLPFNEPSTAT SFSSCSTINCSTE+TSREEGHCNRRPLLLGVGALATSLL ASPLFA EVPKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRA+SRTSFATIAI
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

TrEMBL top hitse value%identityAlignment
A0A1S3CKZ3 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X12.5e-12293.64Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY
        MAVSTSCLSWVPTTASNWKL+LLPFNEP+TAT SFSS STINCS ERTSR+EG  NRRPLLLGVGALATSLL ASPLFA+EVPKNYRAFVD TDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQK TIYDMKERTIDG+NYYTFEYKLSSRA+SRT+FATIAI
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

A0A6J1GN22 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X28.6e-12393.64Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY
        MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+TI CSTERTSR E HCNRRPLLLGVGALA SL  ASPLFA EVPKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRAYSRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

A0A6J1GN93 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X19.1e-12594.07Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY
        MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+TI CSTERTSR E HCNRRPLLLGVGALA SL  ASPLFAEEVPKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRAYSRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

A0A6J1JMZ7 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X29.5e-12292.8Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY
        MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+T+ CSTERTSR E  CNRRPLLLGVGALATSL  A PLFA EVPKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRAYSRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

A0A6J1JS28 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X11.0e-12393.22Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY
        MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+T+ CSTERTSR E  CNRRPLLLGVGALATSL  A PLFAEEVPKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRAYSRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

SwissProt top hitse value%identityAlignment
O23403 PsbP domain-containing protein 1, chloroplastic7.0e-0522.32Show/hide
Query:  INCSTERTSREEGHCNRRPLLLGVGALATSLLTAS---PLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKD
        INC T+  +++     RR  ++ +G L + L+ +    P      P  +R ++D+ DGYS+ YP +W +      D  F+D  +  +N+ V+F      +
Subjt:  INCSTERTSREEGHCNRRPLLLGVGALATSLLTAS---PLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKD

Query:  ---IHEEGPLDEVVNFLVKH--------RYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRA-----------------YSRTSFATIAIANGRYYTLV
           + + G  +EV   +++         R     Q   +        DG+ YY  E  + S A                 ++R   A + + N R Y++ 
Subjt:  ---IHEEGPLDEVVNFLVKH--------RYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRA-----------------YSRTSFATIAIANGRYYTLV

Query:  VGANDRRWRRYRDMLKVVADSFRV
        +   ++ +      L+ V DSFRV
Subjt:  VGANDRRWRRYRDMLKVVADSFRV

O80634 Photosynthetic NDH subunit of lumenal location 1, chloroplastic3.3e-7158.47Show/hide
Query:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEG-HCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY
        ++S  C  + PT +   K  +L  N    A C  SS    + S     +  G +  RR  L+GVG L  + + A+ L AEE+PK+Y  FVD  DGYSYYY
Subjt:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEG-HCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ ATIYDMKER  DG+NYYTFEY L +  Y+ TSFAT+A+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
         N RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

P82538 PsbP-like protein 1, chloroplastic2.9e-3539.58Show/hide
Query:  STERTSREEGHCNRRPLL-LGVGALATSLLTASPL-FAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEE
        S+  +S  +  C RR ++  GV A   SLL+ +PL FA E  K + A  D+ D Y++ YP  W+E      D  +KD    L++V V  +PT K+ I E 
Subjt:  STERTSREEGHCNRRPLL-LGVGALATSLLTASPL-FAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEE

Query:  GPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRV
        GP  ++   L+K   A PNQK T+ D  E  +DG+ YY FE+ + +R Y+R +  TI + NG +YTL  GAN+RRW + +D L  V DSF++
Subjt:  GPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRV

Arabidopsis top hitse value%identityAlignment
AT2G39470.1 PsbP-like protein 22.3e-7258.47Show/hide
Query:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEG-HCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY
        ++S  C  + PT +   K  +L  N    A C  SS    + S     +  G +  RR  L+GVG L  + + A+ L AEE+PK+Y  FVD  DGYSYYY
Subjt:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEG-HCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ ATIYDMKER  DG+NYYTFEY L +  Y+ TSFAT+A+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
         N RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

AT2G39470.2 PsbP-like protein 25.8e-7157.56Show/hide
Query:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCN---RRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSY
        ++S  C  + PT +   ++ L P   PS   C         C     + ++G  N   RR  L+GVG L  + + A+ L AEE+PK+Y  FVD  DGYSY
Subjt:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCN---RRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSY

Query:  YYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATI
        YYPSDWREFDFRAHDSAFKDRYLQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ ATIYDMKER  DG+NYYTFEY L +  Y+ TSFAT+
Subjt:  YYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATI

Query:  AIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        A+ N RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Subjt:  AIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

AT2G39470.3 PsbP-like protein 25.4e-4556.4Show/hide
Query:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCN---RRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSY
        ++S  C  + PT +   ++ L P   PS   C         C     + ++G  N   RR  L+GVG L  + + A+ L AEE+PK+Y  FVD  DGYSY
Subjt:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCN---RRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSY

Query:  YYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKE
        YYPSDWREFDFRAHDSAFKDRYLQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ ATIYDMKE
Subjt:  YYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKE

AT3G55330.1 PsbP-like protein 12.1e-3639.58Show/hide
Query:  STERTSREEGHCNRRPLL-LGVGALATSLLTASPL-FAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEE
        S+  +S  +  C RR ++  GV A   SLL+ +PL FA E  K + A  D+ D Y++ YP  W+E      D  +KD    L++V V  +PT K+ I E 
Subjt:  STERTSREEGHCNRRPLL-LGVGALATSLLTASPL-FAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEE

Query:  GPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRV
        GP  ++   L+K   A PNQK T+ D  E  +DG+ YY FE+ + +R Y+R +  TI + NG +YTL  GAN+RRW + +D L  V DSF++
Subjt:  GPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRV

AT4G15510.1 Photosystem II reaction center PsbP family protein5.0e-0622.32Show/hide
Query:  INCSTERTSREEGHCNRRPLLLGVGALATSLLTAS---PLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKD
        INC T+  +++     RR  ++ +G L + L+ +    P      P  +R ++D+ DGYS+ YP +W +      D  F+D  +  +N+ V+F      +
Subjt:  INCSTERTSREEGHCNRRPLLLGVGALATSLLTAS---PLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKD

Query:  ---IHEEGPLDEVVNFLVKH--------RYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRA-----------------YSRTSFATIAIANGRYYTLV
           + + G  +EV   +++         R     Q   +        DG+ YY  E  + S A                 ++R   A + + N R Y++ 
Subjt:  ---IHEEGPLDEVVNFLVKH--------RYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRA-----------------YSRTSFATIAIANGRYYTLV

Query:  VGANDRRWRRYRDMLKVVADSFRV
        +   ++ +      L+ V DSFRV
Subjt:  VGANDRRWRRYRDMLKVVADSFRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTTTCAACCTCTTGCTTGAGTTGGGTTCCCACCACCGCCTCCAATTGGAAGCTGAGGTTGCTTCCTTTCAATGAGCCTTCAACAGCTACTTGTTCATTTTCTTC
CTGTAGTACCATCAATTGCTCAACTGAGAGAACTTCCCGTGAGGAAGGCCATTGCAATAGAAGGCCGCTTCTGTTGGGAGTTGGAGCTCTAGCTACAAGTTTACTCACTG
CAAGTCCCCTCTTTGCTGAAGAAGTCCCAAAAAATTATCGAGCATTTGTAGACTCTACAGATGGGTATTCCTATTATTACCCCTCTGATTGGAGGGAATTTGATTTTAGA
GCCCACGATTCGGCATTCAAGGATCGATACCTGCAACTACAGAATGTTAGAGTGAAGTTCATACCAACAGAGAAAAAGGATATCCATGAAGAAGGTCCATTAGATGAGGT
TGTCAACTTTTTGGTAAAACATCGATATGCTGCACCAAATCAAAAGGCTACCATATATGACATGAAGGAGCGAACGATTGATGGGAGAAATTATTACACCTTTGAGTATA
AACTTAGTTCTAGAGCATACTCCCGCACCTCCTTTGCAACCATAGCCATTGCAAACGGTAGGTACTATACTTTGGTAGTGGGGGCAAATGACAGAAGGTGGAGAAGGTAC
CGCGACATGCTTAAAGTGGTTGCTGATTCATTCAGGGTGTTGGATATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTTTCAACCTCTTGCTTGAGTTGGGTTCCCACCACCGCCTCCAATTGGAAGCTGAGGTTGCTTCCTTTCAATGAGCCTTCAACAGCTACTTGTTCATTTTCTTC
CTGTAGTACCATCAATTGCTCAACTGAGAGAACTTCCCGTGAGGAAGGCCATTGCAATAGAAGGCCGCTTCTGTTGGGAGTTGGAGCTCTAGCTACAAGTTTACTCACTG
CAAGTCCCCTCTTTGCTGAAGAAGTCCCAAAAAATTATCGAGCATTTGTAGACTCTACAGATGGGTATTCCTATTATTACCCCTCTGATTGGAGGGAATTTGATTTTAGA
GCCCACGATTCGGCATTCAAGGATCGATACCTGCAACTACAGAATGTTAGAGTGAAGTTCATACCAACAGAGAAAAAGGATATCCATGAAGAAGGTCCATTAGATGAGGT
TGTCAACTTTTTGGTAAAACATCGATATGCTGCACCAAATCAAAAGGCTACCATATATGACATGAAGGAGCGAACGATTGATGGGAGAAATTATTACACCTTTGAGTATA
AACTTAGTTCTAGAGCATACTCCCGCACCTCCTTTGCAACCATAGCCATTGCAAACGGTAGGTACTATACTTTGGTAGTGGGGGCAAATGACAGAAGGTGGAGAAGGTAC
CGCGACATGCTTAAAGTGGTTGCTGATTCATTCAGGGTGTTGGATATCTGA
Protein sequenceShow/hide protein sequence
MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFR
AHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAYSRTSFATIAIANGRYYTLVVGANDRRWRRY
RDMLKVVADSFRVLDI