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Lsi02G016810 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G016810
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionChalcone--flavanone isomerase
Genome locationchr02:22611107..22611593
RNA-Seq ExpressionLsi02G016810
SyntenyLsi02G016810
Gene Ontology termsGO:0009813 - flavonoid biosynthetic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0045430 - chalcone isomerase activity (molecular function)
InterPro domainsIPR016087 - Chalcone isomerase
IPR016088 - Chalcone isomerase, 3-layer sandwich
IPR016089 - Chalcone isomerase, orthogonal bundle domain superfamily
IPR036298 - Chalcone isomerase superfamily
IPR044164 - Chalcone--flavonone isomerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149817.1 chalcone--flavonone isomerase [Cucumis sativus]8.0e-3089.61Show/hide
Query:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVT
        VE V FPAEIKPPASA  LFLGGAGVRAL+IGGNTVKFTAIG+YLE+KAVPSLAG WSGKSAAELMDSVEFFRDVVT
Subjt:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVT

XP_008463530.1 PREDICTED: chalcone--flavonone isomerase [Cucumis melo]4.7e-3089.61Show/hide
Query:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVT
        VEN++FP EIKPPAS+K LFLGGAGVRAL+IGGNTVKFTAIGVYLE+KAVPSLAG WSGKSAAELMDSVEFFRDVVT
Subjt:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVT

XP_022133567.1 chalcone--flavonone isomerase [Momordica charantia]2.2e-2780.72Show/hide
Query:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVTEMTARF
        VENV FP +IKPPASAK LFLGGAGVRAL+IGGN+VKFTAIGVYLEE AV  LAG WSGKSA ELMDSVEFFRDVVT    +F
Subjt:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVTEMTARF

XP_023549701.1 chalcone--flavonone isomerase [Cucurbita pepo subsp. pepo]1.4e-2675.9Show/hide
Query:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVTEMTARF
        VENVKFP +IKPPASAK LFLGGAGVR L++GGN+VKFTAIGVYLE+ A+P LAG W GKSAAELMDS EFFRD+VT    +F
Subjt:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVTEMTARF

XP_038890831.1 chalcone--flavonone isomerase [Benincasa hispida]9.5e-3193.51Show/hide
Query:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVT
        VENVKFPAEIKPPASAK LFLGGAGVRAL+IGGNTVKFTAIGVYLEEKAVP LA  WSGKSAAELMDSVEFFRDVVT
Subjt:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVT

TrEMBL top hitse value%identityAlignment
A0A0A0KU44 Chalcone-flavonone isomerase family protein3.9e-3089.61Show/hide
Query:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVT
        VE V FPAEIKPPASA  LFLGGAGVRAL+IGGNTVKFTAIG+YLE+KAVPSLAG WSGKSAAELMDSVEFFRDVVT
Subjt:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVT

A0A1S3CJH4 Chalcone-flavonone isomerase family protein2.3e-3089.61Show/hide
Query:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVT
        VEN++FP EIKPPAS+K LFLGGAGVRAL+IGGNTVKFTAIGVYLE+KAVPSLAG WSGKSAAELMDSVEFFRDVVT
Subjt:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVT

A0A5D3C1D7 Chalcone-flavonone isomerase family protein2.3e-3089.61Show/hide
Query:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVT
        VEN++FP EIKPPAS+K LFLGGAGVRAL+IGGNTVKFTAIGVYLE+KAVPSLAG WSGKSAAELMDSVEFFRDVVT
Subjt:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVT

A0A6J1BX19 Chalcone-flavonone isomerase family protein1.1e-2780.72Show/hide
Query:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVTEMTARF
        VENV FP +IKPPASAK LFLGGAGVRAL+IGGN+VKFTAIGVYLEE AV  LAG WSGKSA ELMDSVEFFRDVVT    +F
Subjt:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVTEMTARF

A0A6J1K162 Chalcone-flavonone isomerase family protein2.0e-2675.9Show/hide
Query:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVTEMTARF
        VENVKFP +IKPPASAK LFLGGAGVR L+I GN+VKFTAIGVYLE+ A+P LAG W GKSAAELMDS EFFRD+VT  + +F
Subjt:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVTEMTARF

SwissProt top hitse value%identityAlignment
A1E260 Chalcone--flavanone isomerase 11.4e-2462.65Show/hide
Query:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVTEMTARF
        VEN+ FP+ +KPP     LFLGGAGVR ++I GN VKFT IGVYLE+KA+P LAG W GK+A EL++SVEFFRD+VT    +F
Subjt:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVTEMTARF

A1E261 Chalcone--flavanone isomerase 21.4e-2462.65Show/hide
Query:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVTEMTARF
        VEN+ FP+ +KPP     LFLGGAGVR ++I GN VKFT IGVYLE+KA+P LAG W GK+A EL++SVEFFRD+VT    +F
Subjt:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVTEMTARF

O65333 Chalcone--flavanone isomerase1.1e-2466.27Show/hide
Query:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVTEMTARF
        VE+V FP E+KPP S+K LFLGGAGVR ++I G  +KFTAIGVYLE+ AVPSLA  W GKSA EL +SVEFFRD+VT    +F
Subjt:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVTEMTARF

Q42663 Chalcone--flavanone isomerase (Fragment)4.4e-2361.45Show/hide
Query:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVTEMTARF
        VE++ FP+ +KPP S  +LFLGGAGVR ++I GN VKFT IGVYLE+KA+P LA    GK+ AEL+DSVEFFRD+VT    +F
Subjt:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVTEMTARF

Q8LKP9 Chalcone--flavanone isomerase1.2e-2361.45Show/hide
Query:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVTEMTARF
        VE++ FP  +KPP +   LFLGGAGVR ++I GN VKFT IGVYLE+KA+PSLA  W GK+AAEL DSV+F+RD+VT    +F
Subjt:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVTEMTARF

Arabidopsis top hitse value%identityAlignment
AT3G55120.1 Chalcone-flavanone isomerase family protein8.9e-1954.22Show/hide
Query:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVTEMTARF
        V++V F   +K PAS+  LFLGGAGVR L I G  V FT IGVYLE  AVPSL+  W GK+  EL +S+ FFR++VT    +F
Subjt:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVTEMTARF

AT5G05270.1 Chalcone-flavanone isomerase family protein2.7e-0741.33Show/hide
Query:  MAPVENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFF
        M  V  V FP +I    ++K L L G G+  ++I    VKFTAIGVYL+   V +   NW GK+  EL    +FF
Subjt:  MAPVENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFF

AT5G05270.2 Chalcone-flavanone isomerase family protein2.7e-0741.33Show/hide
Query:  MAPVENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFF
        M  V  V FP +I    ++K L L G G+  ++I    VKFTAIGVYL+   V +   NW GK+  EL    +FF
Subjt:  MAPVENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFF

AT5G66230.2 Chalcone-flavanone isomerase family protein9.5e-1349.35Show/hide
Query:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVT
        V+   FP  ++ PAS K LFLGGA        G  V  T IGVYLE  A+PS++  W GK+A EL +SV FFR +VT
Subjt:  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCGGTCGAGAACGTGAAATTTCCGGCGGAAATCAAACCTCCGGCCTCCGCTAAGGCTCTATTCCTCGGCGGCGCAGGAGTTAGGGCGTTGCAGATCGGAGGAAA
CACCGTGAAATTTACTGCGATCGGTGTTTACTTGGAGGAGAAAGCTGTACCGTCGCTCGCCGGTAACTGGAGTGGAAAGAGTGCGGCGGAGTTGATGGATTCCGTTGAGT
TCTTCAGAGACGTCGTAACTGAGATGACTGCTAGATTTCCGCCGTGCCGGCCGCCGGATGTCACTGGTGTTCCGGTGACTTCACTTTTTAACTTGCTAGATCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCGGTCGAGAACGTGAAATTTCCGGCGGAAATCAAACCTCCGGCCTCCGCTAAGGCTCTATTCCTCGGCGGCGCAGGAGTTAGGGCGTTGCAGATCGGAGGAAA
CACCGTGAAATTTACTGCGATCGGTGTTTACTTGGAGGAGAAAGCTGTACCGTCGCTCGCCGGTAACTGGAGTGGAAAGAGTGCGGCGGAGTTGATGGATTCCGTTGAGT
TCTTCAGAGACGTCGTAACTGAGATGACTGCTAGATTTCCGCCGTGCCGGCCGCCGGATGTCACTGGTGTTCCGGTGACTTCACTTTTTAACTTGCTAGATCGTTGA
Protein sequenceShow/hide protein sequence
MAPVENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVTEMTARFPPCRPPDVTGVPVTSLFNLLDR