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Lsi02G016970 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G016970
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLOB domain-containing protein
Genome locationchr02:22736296..22737758
RNA-Seq ExpressionLsi02G016970
SyntenyLsi02G016970
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578743.1 LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]1.3e-4893.33Show/hide
Query:  MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQN
        MQSPPPP   MVVLSPCAACKILRRRCVD CVLAPYFPPTEPLKFAAVH+IFGAGNVIKFLQELP++QRADATSSLVYEANARIRDPVYGCTGSIFQLQN
Subjt:  MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQN

Query:  QVSEL
        QVSEL
Subjt:  QVSEL

KAG7016272.1 LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-4893.33Show/hide
Query:  MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQN
        MQSPPPP   MVVLSPCAACKILRRRCVD CVLAPYFPPTEPLKFAAVH+IFGAGNVIKFLQELP++QRADATSSLVYEANARIRDPVYGCTGSIFQLQN
Subjt:  MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQN

Query:  QVSEL
        QVSEL
Subjt:  QVSEL

XP_022939142.1 LOB domain-containing protein 1-like [Cucurbita moschata]2.5e-4792.45Show/hide
Query:  MQSPPPPLSS-MVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQ
        MQSPPPP    MVVLSPCAACKILRRRCVD CVLAPYFPPTEPLKFAAVH+IFGAGNVIKFLQELP++QRADATSSLVYEANARIRDPVYGCTGSIFQLQ
Subjt:  MQSPPPPLSS-MVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQ

Query:  NQVSEL
        NQVSEL
Subjt:  NQVSEL

XP_022993359.1 LOB domain-containing protein 1-like [Cucurbita maxima]9.8e-4494.74Show/hide
Query:  MVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSEL
        MVVLSPCAACKILRRRCVD CVLAPYFPPTEPLKFAAVH+IFGA NVIKFLQELP +QRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSEL
Subjt:  MVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSEL

XP_023551518.1 LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo]1.2e-4494.74Show/hide
Query:  MVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSEL
        MVVLSPCAACKILRRRCVD CVLAPYFPPTEPLKFAAVH+IFGAGNVIKFLQELP++QRADATSSLVYEANARIRDP+YGCTGSIFQLQNQVSEL
Subjt:  MVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSEL

TrEMBL top hitse value%identityAlignment
A0A0A0KU20 LOB domain-containing protein2.6e-4282.86Show/hide
Query:  MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQN
        MQS  PP    VVLSPCAACKILRRRCVD C+LAPYFPPT+P KFAAVH+I+GAGNVIKFLQELP+ QRADA SSLVYEANARIRDP+YGCTGSIFQLQN
Subjt:  MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQN

Query:  QVSEL
        +V EL
Subjt:  QVSEL

A0A2G9G2A4 LOB domain-containing protein2.9e-4176.7Show/hide
Query:  SPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQV
        SPPPP  S V+LSPCAACKILRRRCV+NCVLAPYFPPTEPLKF   H++FGA N+IK LQELP+ QRADA +S+VYEANAR+RDP+YGCTG+I  LQNQ+
Subjt:  SPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQV

Query:  SEL
        SEL
Subjt:  SEL

A0A6J1FFZ7 LOB domain-containing protein 1-like1.2e-4792.45Show/hide
Query:  MQSPPPPLSS-MVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQ
        MQSPPPP    MVVLSPCAACKILRRRCVD CVLAPYFPPTEPLKFAAVH+IFGAGNVIKFLQELP++QRADATSSLVYEANARIRDPVYGCTGSIFQLQ
Subjt:  MQSPPPPLSS-MVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQ

Query:  NQVSEL
        NQVSEL
Subjt:  NQVSEL

A0A6J1JZZ3 LOB domain-containing protein 1-like4.7e-4494.74Show/hide
Query:  MVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSEL
        MVVLSPCAACKILRRRCVD CVLAPYFPPTEPLKFAAVH+IFGA NVIKFLQELP +QRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSEL
Subjt:  MVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSEL

W9RZL7 LOB domain-containing protein6.4e-4180.39Show/hide
Query:  PPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVS
        PPPP    VVLSPCAACKILRRRCVD CVLAPYFPPTEPLKF   H++FGA N+IKFLQE+P+SQRADA SS+VYEANARIRDPVYGC G+I QLQ QVS
Subjt:  PPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVS

Query:  EL
        EL
Subjt:  EL

SwissProt top hitse value%identityAlignment
Q8L5T5 LOB domain-containing protein 156.8e-3261.9Show/hide
Query:  MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQN
        M  PP  L++   ++PCAACK+LRRRC   C  +PYF P EP KFA+VHK+FGA NV K L E+P+SQRADA +SLVYEAN R+RDPVYGC G+I  LQ 
Subjt:  MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQN

Query:  QVSEL
        QV  L
Subjt:  QVSEL

Q8LBW3 LOB domain-containing protein 123.3e-3471.43Show/hide
Query:  SPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSEL
        SPCA+CK+LRRRC  +C+ APYFPP +P KFA VHK+FGA NV K LQELP  QRADA +SLV+EANAR+RDPVYGC G+I  LQNQVS+L
Subjt:  SPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSEL

Q9LQR0 LOB domain-containing protein 12.1e-4174.76Show/hide
Query:  SPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQV
        SPPP LS  VVLSPCAACKILRRRC + CVLAPYFPPT+P KF   H++FGA N+IKFLQELP+SQR DA +S+VYEA ARIRDPVYGC G+I+ LQ QV
Subjt:  SPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQV

Query:  SEL
        SEL
Subjt:  SEL

Q9SHE9 LOB domain-containing protein 48.9e-3268.13Show/hide
Query:  SPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSEL
        SPCAACK+LRRRC  +CV +PYFP  EP KFA VH++FGA NV K LQELP  QR DA SS+VYEANAR+RDPVYGC G+I  LQ Q+  L
Subjt:  SPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSEL

Q9SK08 LOB domain-containing protein 118.9e-4070.64Show/hide
Query:  SPPPPLSSM------VVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIF
        SPPPP S        VVLSPCAACKILRRRC D CVLAPYFPPT+P KF   H++FGA N+IKFLQELP+SQR DA +S+VYEA AR+RDPVYGC G+I+
Subjt:  SPPPPLSSM------VVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIF

Query:  QLQNQVSEL
         LQ QVSEL
Subjt:  QLQNQVSEL

Arabidopsis top hitse value%identityAlignment
AT1G07900.1 LOB domain-containing protein 11.5e-4274.76Show/hide
Query:  SPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQV
        SPPP LS  VVLSPCAACKILRRRC + CVLAPYFPPT+P KF   H++FGA N+IKFLQELP+SQR DA +S+VYEA ARIRDPVYGC G+I+ LQ QV
Subjt:  SPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQV

Query:  SEL
        SEL
Subjt:  SEL

AT1G31320.1 LOB domain-containing protein 46.3e-3368.13Show/hide
Query:  SPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSEL
        SPCAACK+LRRRC  +CV +PYFP  EP KFA VH++FGA NV K LQELP  QR DA SS+VYEANAR+RDPVYGC G+I  LQ Q+  L
Subjt:  SPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSEL

AT2G28500.1 LOB domain-containing protein 116.3e-4170.64Show/hide
Query:  SPPPPLSSM------VVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIF
        SPPPP S        VVLSPCAACKILRRRC D CVLAPYFPPT+P KF   H++FGA N+IKFLQELP+SQR DA +S+VYEA AR+RDPVYGC G+I+
Subjt:  SPPPPLSSM------VVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIF

Query:  QLQNQVSEL
         LQ QVSEL
Subjt:  QLQNQVSEL

AT2G30130.1 Lateral organ boundaries (LOB) domain family protein2.3e-3571.43Show/hide
Query:  SPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSEL
        SPCA+CK+LRRRC  +C+ APYFPP +P KFA VHK+FGA NV K LQELP  QRADA +SLV+EANAR+RDPVYGC G+I  LQNQVS+L
Subjt:  SPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSEL

AT2G40470.1 LOB domain-containing protein 154.9e-3361.9Show/hide
Query:  MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQN
        M  PP  L++   ++PCAACK+LRRRC   C  +PYF P EP KFA+VHK+FGA NV K L E+P+SQRADA +SLVYEAN R+RDPVYGC G+I  LQ 
Subjt:  MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQN

Query:  QVSEL
        QV  L
Subjt:  QVSEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCGCCGCCGCCGCCACTGTCGTCGATGGTGGTTCTCAGCCCCTGCGCCGCCTGTAAGATCCTCCGCCGGAGATGCGTCGATAATTGTGTTTTAGCGCCTTATTT
TCCTCCCACTGAGCCTCTCAAATTCGCCGCCGTGCATAAAATATTCGGAGCCGGCAACGTCATCAAGTTCCTGCAGGAATTACCAAAGAGTCAGAGAGCGGATGCTACGA
GCAGTTTGGTATACGAAGCGAATGCTAGGATTCGAGACCCAGTCTATGGTTGCACTGGTTCAATTTTTCAACTTCAAAATCAAGTGAGCGAGCTCATGCACAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCGCCGCCGCCGCCACTGTCGTCGATGGTGGTTCTCAGCCCCTGCGCCGCCTGTAAGATCCTCCGCCGGAGATGCGTCGATAATTGTGTTTTAGCGCCTTATTT
TCCTCCCACTGAGCCTCTCAAATTCGCCGCCGTGCATAAAATATTCGGAGCCGGCAACGTCATCAAGTTCCTGCAGGAATTACCAAAGAGTCAGAGAGCGGATGCTACGA
GCAGTTTGGTATACGAAGCGAATGCTAGGATTCGAGACCCAGTCTATGGTTGCACTGGTTCAATTTTTCAACTTCAAAATCAAGTGAGCGAGCTCATGCACAATTAG
Protein sequenceShow/hide protein sequence
MQSPPPPLSSMVVLSPCAACKILRRRCVDNCVLAPYFPPTEPLKFAAVHKIFGAGNVIKFLQELPKSQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSELMHN