; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G017060 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G017060
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:22798525..22799184
RNA-Seq ExpressionLsi02G017060
SyntenyLsi02G017060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040631.1 hypothetical protein E6C27_scaffold262G002160 [Cucumis melo var. makuwa]4.8e-7473.18Show/hide
Query:  MAAVEHEPDVLDLVDVHDDEEDTLSFRDFPIHEPQSEAGESCSDHDDRHDLFEFRTDLKQKTSSSSSSSSEIVFCGKILDAVTLQNEDSALLGISFVNSS
        M +V+++PDVL LVDV  D+EDTLSFRDFPIHEPQSEA +SCSDHDDR D FEF TDL++KT SS    SEIVFCG+ILDA   ++E+SA    +  N S
Subjt:  MAAVEHEPDVLDLVDVHDDEEDTLSFRDFPIHEPQSEAGESCSDHDDRHDLFEFRTDLKQKTSSSSSSSSEIVFCGKILDAVTLQNEDSALLGISFVNSS

Query:  ESPFMRNQSFRYRNSSRSFSSPAVGGLFGNQRSNSRRPMSLIGLTRTPSRMELSEIRKRQARLAPAPMFHVVPGENTVT-VAVDGTGDGISPWRLIKPLR
        ES  +RNQSFRY N SRSFSS AVGGLF NQRSNSRRPM+LIGLT+TPSRME+SEIRKRQARLAPAPMFHVVP E  VT VA DG   GISPWRLI+P+R
Subjt:  ESPFMRNQSFRYRNSSRSFSSPAVGGLFGNQRSNSRRPMSLIGLTRTPSRMELSEIRKRQARLAPAPMFHVVPGENTVT-VAVDGTGDGISPWRLIKPLR

Query:  YRSVVVRVLAKAASTCIAHV
        YRSVVVRVLAKAASTC+  V
Subjt:  YRSVVVRVLAKAASTCIAHV

KAE8648518.1 hypothetical protein Csa_008278 [Cucumis sativus]1.3e-7172.73Show/hide
Query:  MAAVEHEPDVLDLVDVHDDEEDTLSFRDFPIHEPQSEAGESCSDHDDRHDLFEFRTDLKQKTSSSSSSSSEIVFCGKILDAVTLQNEDSALLGISFVNSS
        M +V++ PD+LD++DV DD EDTLSFRDFPI EPQSEAG+SCSDHDDR D FEFRTDLK+KT SS    SEIVFCG+ LD    ++EDSA    S  N S
Subjt:  MAAVEHEPDVLDLVDVHDDEEDTLSFRDFPIHEPQSEAGESCSDHDDRHDLFEFRTDLKQKTSSSSSSSSEIVFCGKILDAVTLQNEDSALLGISFVNSS

Query:  ESPFMRNQSFRYRNSSRSFSSPAVGGLFGNQRSNSRRPMSLIGLTRTPSRMELSEIRKRQARLAPAPMFHVVPGENTVT-VAVDGTGDGISPWRLIKPLR
        ES  +RNQSFRY N SR FSS AVGGLF  QRSNSRRPM+LIGLT+TPSR+ELSEIRKRQARLAP PMFHVVP E TV+ V  DG   GISPWRLIKPLR
Subjt:  ESPFMRNQSFRYRNSSRSFSSPAVGGLFGNQRSNSRRPMSLIGLTRTPSRMELSEIRKRQARLAPAPMFHVVPGENTVT-VAVDGTGDGISPWRLIKPLR

Query:  YRSVVVRVLAKAASTCIAHV
        YRSVVVRVLAKAASTC++ V
Subjt:  YRSVVVRVLAKAASTCIAHV

KAG6602329.1 hypothetical protein SDJN03_07562, partial [Cucurbita argyrosperma subsp. sororia]4.1e-5765.3Show/hide
Query:  MAAVEHEPDVLDLVDVHDDEEDTLSFRDFPIHEPQSEAGESCSDHDDRHDLFEFRTDLKQKTSSSSSSSSEIVFCGKILDA--VTLQNEDSALLGISFVN
        MA+VE+  +VLDL+   DD+ D LS RDFPIHE Q +    C      HDLFEF TDLKQ+T SSSS  SEIVFCGKILDA  ++L+++DS   G SF +
Subjt:  MAAVEHEPDVLDLVDVHDDEEDTLSFRDFPIHEPQSEAGESCSDHDDRHDLFEFRTDLKQKTSSSSSSSSEIVFCGKILDA--VTLQNEDSALLGISFVN

Query:  SSESPFMRNQSFRYRNSSRSFSSPAVGGLFGNQRSNSRRPMSLIGLTRTPSRMELSEIRKRQARLAPAPMFHVVPGENTVTVAVDGTGDGISPWRLIKPL
        +SE  FMRNQSFR    S+SFSSP +G  FG QRS+ RRPM+LIGLTRTPSR ELSEIR+RQARLAPAPMF VVPGE   TVA DGTG  +SPW LI+ L
Subjt:  SSESPFMRNQSFRYRNSSRSFSSPAVGGLFGNQRSNSRRPMSLIGLTRTPSRMELSEIRKRQARLAPAPMFHVVPGENTVTVAVDGTGDGISPWRLIKPL

Query:  RYRSVVVRVLAKAASTCIA
        RYRSV+VR LAKAAS+CIA
Subjt:  RYRSVVVRVLAKAASTCIA

TQD97329.1 hypothetical protein C1H46_017031 [Malus baccata]7.9e-1635.89Show/hide
Query:  EEDTLSFRDFPIHEPQSEAGE----SCSDHDDRHDLFEFRTDLKQKTSSSSSSSSEIVFCGKILDAVTLQNEDSALLGISFVNSSESPFM-RNQSFRYRN
        EED LSF D P+H+   E+ E    S S   D    FEF  D             ++VFCGK +D   L+NE+  +         E+PF  R++SF++ +
Subjt:  EEDTLSFRDFPIHEPQSEAGE----SCSDHDDRHDLFEFRTDLKQKTSSSSSSSSEIVFCGKILDAVTLQNEDSALLGISFVNSSESPFM-RNQSFRYRN

Query:  SSRSFS----SPAVGGLFGNQRSNSRRPMSLIGLTRTPSRMELSEIRKRQARLAPAPMFHVVPGENTVTVAVDGTGDGISPWRLIKPLRYRSVVVRVLAK
         S   S    S  V     +  SNSR+   LIGL +    M+++EIRKRQ R  PAPMF V+ G    +V    +G G   WRL++ LR R  ++  LAK
Subjt:  SSRSFS----SPAVGGLFGNQRSNSRRPMSLIGLTRTPSRMELSEIRKRQARLAPAPMFHVVPGENTVTVAVDGTGDGISPWRLIKPLRYRSVVVRVLAK

Query:  AASTCIAHV
        A   C+  V
Subjt:  AASTCIAHV

XP_023887327.1 uncharacterized protein LOC111999433 [Quercus suber]2.3e-1535.94Show/hide
Query:  HDD-EEDTLSFRDFPIHEPQSEAGE-----SCSDHDDRHDLFEFRTDLKQKTSSSSSSSSEIVFCGKILDAVTLQNEDSALLGISFVNSSESPFMRNQSF
        H+D EED LS  D  I++  +E  E     S SD   R DLFEF       T++ +  +  ++FCG+++     + E+        +  SES F ++Q F
Subjt:  HDD-EEDTLSFRDFPIHEPQSEAGE-----SCSDHDDRHDLFEFRTDLKQKTSSSSSSSSEIVFCGKILDAVTLQNEDSALLGISFVNSSESPFMRNQSF

Query:  ---RYRNSSRSFS--SPAVGGLFGNQRSNSRRPMSLIGLTRTPSRMELSEIRKRQARLAPAPMFHVVPGENTVTVA-------VDGTGDGISPWRLIKPL
           R+  ++RS S   PA G  F  Q+  S++   +IGL +   +MELSEIRKRQAR  P PM  VV       +A         G G   SPW L++PL
Subjt:  ---RYRNSSRSFS--SPAVGGLFGNQRSNSRRPMSLIGLTRTPSRMELSEIRKRQARLAPAPMFHVVPGENTVTVA-------VDGTGDGISPWRLIKPL

Query:  RYRSVVVRVLAKAASTC
        R R+    VLA+A+S C
Subjt:  RYRSVVVRVLAKAASTC

TrEMBL top hitse value%identityAlignment
A0A0A0KNN4 Uncharacterized protein6.4e-7272.73Show/hide
Query:  MAAVEHEPDVLDLVDVHDDEEDTLSFRDFPIHEPQSEAGESCSDHDDRHDLFEFRTDLKQKTSSSSSSSSEIVFCGKILDAVTLQNEDSALLGISFVNSS
        M +V++ PD+LD++DV DD EDTLSFRDFPI EPQSEAG+SCSDHDDR D FEFRTDLK+KT SS    SEIVFCG+ LD    ++EDSA    S  N S
Subjt:  MAAVEHEPDVLDLVDVHDDEEDTLSFRDFPIHEPQSEAGESCSDHDDRHDLFEFRTDLKQKTSSSSSSSSEIVFCGKILDAVTLQNEDSALLGISFVNSS

Query:  ESPFMRNQSFRYRNSSRSFSSPAVGGLFGNQRSNSRRPMSLIGLTRTPSRMELSEIRKRQARLAPAPMFHVVPGENTVT-VAVDGTGDGISPWRLIKPLR
        ES  +RNQSFRY N SR FSS AVGGLF  QRSNSRRPM+LIGLT+TPSR+ELSEIRKRQARLAP PMFHVVP E TV+ V  DG   GISPWRLIKPLR
Subjt:  ESPFMRNQSFRYRNSSRSFSSPAVGGLFGNQRSNSRRPMSLIGLTRTPSRMELSEIRKRQARLAPAPMFHVVPGENTVT-VAVDGTGDGISPWRLIKPLR

Query:  YRSVVVRVLAKAASTCIAHV
        YRSVVVRVLAKAASTC++ V
Subjt:  YRSVVVRVLAKAASTCIAHV

A0A498JHK6 Uncharacterized protein1.9e-1535.41Show/hide
Query:  EEDTLSFRDFPIHEPQSEAGE----SCSDHDDRHDLFEFRTDLKQKTSSSSSSSSEIVFCGKILDAVTLQNEDSALLGISFVNSSESPFM-RNQSFRYRN
        EED LSF D P+H+   E+ E    S S   D    FEF  D             ++VFCGK    + L+NE+  +         E+PF  R++SF++ +
Subjt:  EEDTLSFRDFPIHEPQSEAGE----SCSDHDDRHDLFEFRTDLKQKTSSSSSSSSEIVFCGKILDAVTLQNEDSALLGISFVNSSESPFM-RNQSFRYRN

Query:  SSRSFS----SPAVGGLFGNQRSNSRRPMSLIGLTRTPSRMELSEIRKRQARLAPAPMFHVVPGENTVTVAVDGTGDGISPWRLIKPLRYRSVVVRVLAK
         S   S    S  V     +  SNSR+   LIGL +    M+++EIRKRQ R  PAPMF V+ G    +V    +G G   WRL++ LR R  ++  LAK
Subjt:  SSRSFS----SPAVGGLFGNQRSNSRRPMSLIGLTRTPSRMELSEIRKRQARLAPAPMFHVVPGENTVTVAVDGTGDGISPWRLIKPLRYRSVVVRVLAK

Query:  AASTCIAHV
        A   C+  V
Subjt:  AASTCIAHV

A0A540MG00 Uncharacterized protein3.8e-1635.89Show/hide
Query:  EEDTLSFRDFPIHEPQSEAGE----SCSDHDDRHDLFEFRTDLKQKTSSSSSSSSEIVFCGKILDAVTLQNEDSALLGISFVNSSESPFM-RNQSFRYRN
        EED LSF D P+H+   E+ E    S S   D    FEF  D             ++VFCGK +D   L+NE+  +         E+PF  R++SF++ +
Subjt:  EEDTLSFRDFPIHEPQSEAGE----SCSDHDDRHDLFEFRTDLKQKTSSSSSSSSEIVFCGKILDAVTLQNEDSALLGISFVNSSESPFM-RNQSFRYRN

Query:  SSRSFS----SPAVGGLFGNQRSNSRRPMSLIGLTRTPSRMELSEIRKRQARLAPAPMFHVVPGENTVTVAVDGTGDGISPWRLIKPLRYRSVVVRVLAK
         S   S    S  V     +  SNSR+   LIGL +    M+++EIRKRQ R  PAPMF V+ G    +V    +G G   WRL++ LR R  ++  LAK
Subjt:  SSRSFS----SPAVGGLFGNQRSNSRRPMSLIGLTRTPSRMELSEIRKRQARLAPAPMFHVVPGENTVTVAVDGTGDGISPWRLIKPLRYRSVVVRVLAK

Query:  AASTCIAHV
        A   C+  V
Subjt:  AASTCIAHV

A0A5A7TG51 Uncharacterized protein2.3e-7473.18Show/hide
Query:  MAAVEHEPDVLDLVDVHDDEEDTLSFRDFPIHEPQSEAGESCSDHDDRHDLFEFRTDLKQKTSSSSSSSSEIVFCGKILDAVTLQNEDSALLGISFVNSS
        M +V+++PDVL LVDV  D+EDTLSFRDFPIHEPQSEA +SCSDHDDR D FEF TDL++KT SS    SEIVFCG+ILDA   ++E+SA    +  N S
Subjt:  MAAVEHEPDVLDLVDVHDDEEDTLSFRDFPIHEPQSEAGESCSDHDDRHDLFEFRTDLKQKTSSSSSSSSEIVFCGKILDAVTLQNEDSALLGISFVNSS

Query:  ESPFMRNQSFRYRNSSRSFSSPAVGGLFGNQRSNSRRPMSLIGLTRTPSRMELSEIRKRQARLAPAPMFHVVPGENTVT-VAVDGTGDGISPWRLIKPLR
        ES  +RNQSFRY N SRSFSS AVGGLF NQRSNSRRPM+LIGLT+TPSRME+SEIRKRQARLAPAPMFHVVP E  VT VA DG   GISPWRLI+P+R
Subjt:  ESPFMRNQSFRYRNSSRSFSSPAVGGLFGNQRSNSRRPMSLIGLTRTPSRMELSEIRKRQARLAPAPMFHVVPGENTVT-VAVDGTGDGISPWRLIKPLR

Query:  YRSVVVRVLAKAASTCIAHV
        YRSVVVRVLAKAASTC+  V
Subjt:  YRSVVVRVLAKAASTCIAHV

A0A6A1W7H3 Uncharacterized protein2.5e-1534.88Show/hide
Query:  LVDVHDDEEDTLSFRDFPIHEPQSEAG---ESCSDHDDRHDLFEFRTDLKQKTSSSSSSSSEIVFCGKILDAVTLQ-NEDSALLGISFVNSSE-------
        L ++ + EED LS  D PIHE ++E             R D FEF T    + S +  S   I+FCG+++    L  NE          N ++       
Subjt:  LVDVHDDEEDTLSFRDFPIHEPQSEAG---ESCSDHDDRHDLFEFRTDLKQKTSSSSSSSSEIVFCGKILDAVTLQ-NEDSALLGISFVNSSE-------

Query:  -SPFMRNQSFRYRNSSRSFSSPAVGGLFGNQRSNSRRPMSLIGLTRTPSRMELSEIRKRQARLAPAPMFHVVPGENTVTVAVDGTGDGISPWRLIKPLRY
            +R+ SFR +   +S  +PA G  F    S S++   LIGL +    MELSEIRKRQ R  P PMF  V  E  V ++ D +G G S WRL++P R 
Subjt:  -SPFMRNQSFRYRNSSRSFSSPAVGGLFGNQRSNSRRPMSLIGLTRTPSRMELSEIRKRQARLAPAPMFHVVPGENTVTVAVDGTGDGISPWRLIKPLRY

Query:  RSVVVRVLAKAASTC
        RS +   LA+++  C
Subjt:  RSVVVRVLAKAASTC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCAGTGGAGCATGAACCAGATGTTTTGGACCTCGTTGATGTTCACGACGACGAAGAAGATACTCTCTCTTTCCGCGATTTTCCGATTCACGAACCACAATCGGA
AGCTGGGGAATCCTGCAGTGATCACGATGATCGCCACGATTTGTTCGAATTTCGCACCGATTTGAAGCAGAAAACGAGTTCTTCGTCGTCGTCTTCTAGTGAAATTGTTT
TCTGCGGGAAGATTTTGGACGCCGTAACGCTCCAAAATGAAGACTCTGCTTTGCTAGGGATAAGTTTCGTAAATAGCTCAGAATCACCGTTTATGCGAAACCAGAGTTTT
CGGTACCGGAATTCATCGAGATCGTTTTCTTCGCCTGCAGTCGGTGGATTATTCGGAAATCAACGGAGTAATTCGAGGAGGCCGATGTCGTTGATAGGTTTAACAAGAAC
TCCGTCGAGAATGGAGCTGAGCGAGATTCGGAAGAGACAGGCTCGGCTGGCGCCGGCGCCGATGTTCCACGTGGTTCCGGGGGAGAATACGGTAACTGTCGCCGTCGATG
GCACCGGCGACGGAATCAGCCCGTGGAGGCTGATTAAGCCTCTCAGGTATAGGTCCGTTGTGGTTCGGGTGTTGGCTAAGGCGGCTTCGACTTGTATAGCCCATGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCAGTGGAGCATGAACCAGATGTTTTGGACCTCGTTGATGTTCACGACGACGAAGAAGATACTCTCTCTTTCCGCGATTTTCCGATTCACGAACCACAATCGGA
AGCTGGGGAATCCTGCAGTGATCACGATGATCGCCACGATTTGTTCGAATTTCGCACCGATTTGAAGCAGAAAACGAGTTCTTCGTCGTCGTCTTCTAGTGAAATTGTTT
TCTGCGGGAAGATTTTGGACGCCGTAACGCTCCAAAATGAAGACTCTGCTTTGCTAGGGATAAGTTTCGTAAATAGCTCAGAATCACCGTTTATGCGAAACCAGAGTTTT
CGGTACCGGAATTCATCGAGATCGTTTTCTTCGCCTGCAGTCGGTGGATTATTCGGAAATCAACGGAGTAATTCGAGGAGGCCGATGTCGTTGATAGGTTTAACAAGAAC
TCCGTCGAGAATGGAGCTGAGCGAGATTCGGAAGAGACAGGCTCGGCTGGCGCCGGCGCCGATGTTCCACGTGGTTCCGGGGGAGAATACGGTAACTGTCGCCGTCGATG
GCACCGGCGACGGAATCAGCCCGTGGAGGCTGATTAAGCCTCTCAGGTATAGGTCCGTTGTGGTTCGGGTGTTGGCTAAGGCGGCTTCGACTTGTATAGCCCATGTGTGA
Protein sequenceShow/hide protein sequence
MAAVEHEPDVLDLVDVHDDEEDTLSFRDFPIHEPQSEAGESCSDHDDRHDLFEFRTDLKQKTSSSSSSSSEIVFCGKILDAVTLQNEDSALLGISFVNSSESPFMRNQSF
RYRNSSRSFSSPAVGGLFGNQRSNSRRPMSLIGLTRTPSRMELSEIRKRQARLAPAPMFHVVPGENTVTVAVDGTGDGISPWRLIKPLRYRSVVVRVLAKAASTCIAHV