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Lsi02G017330 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G017330
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein GDAP2 homolog
Genome locationchr02:23023742..23024853
RNA-Seq ExpressionLsi02G017330
SyntenyLsi02G017330
Gene Ontology termsNA
InterPro domainsIPR001251 - CRAL-TRIO lipid binding domain
IPR036865 - CRAL-TRIO lipid binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599043.1 Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.4e-5197.09Show/hide
Query:  RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY
        RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAV AMQLLVDN VW+KVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY
Subjt:  RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY

Query:  HRP
        HRP
Subjt:  HRP

XP_004143794.1 protein GDAP2 homolog isoform X1 [Cucumis sativus]8.2e-5298.06Show/hide
Query:  RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY
        RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDN VW+KVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY
Subjt:  RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY

Query:  HRP
        HRP
Subjt:  HRP

XP_008465697.1 PREDICTED: protein GDAP2 homolog [Cucumis melo]8.2e-5298.06Show/hide
Query:  RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY
        RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDN VW+KVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY
Subjt:  RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY

Query:  HRP
        HRP
Subjt:  HRP

XP_022946371.1 protein GDAP2 homolog [Cucurbita moschata]2.4e-5197.09Show/hide
Query:  RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY
        RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAV AMQLLVDN VW+KVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY
Subjt:  RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY

Query:  HRP
        HRP
Subjt:  HRP

XP_038890071.1 protein GDAP2 homolog [Benincasa hispida]8.2e-5298.06Show/hide
Query:  RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY
        RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDN VW+KVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY
Subjt:  RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY

Query:  HRP
        HRP
Subjt:  HRP

TrEMBL top hitse value%identityAlignment
A0A0A0KS03 Macro domain-containing protein4.0e-5298.06Show/hide
Query:  RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY
        RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDN VW+KVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY
Subjt:  RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY

Query:  HRP
        HRP
Subjt:  HRP

A0A1S4E5F4 protein GDAP2 homolog4.0e-5298.06Show/hide
Query:  RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY
        RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDN VW+KVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY
Subjt:  RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY

Query:  HRP
        HRP
Subjt:  HRP

A0A6J1G3J6 protein GDAP2 homolog1.2e-5197.09Show/hide
Query:  RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY
        RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAV AMQLLVDN VW+KVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY
Subjt:  RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY

Query:  HRP
        HRP
Subjt:  HRP

A0A6J1KAK4 protein GDAP2 homolog2.6e-5196.12Show/hide
Query:  RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY
        RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAV AMQLLVDN VW+KVVYIDRL+QLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY
Subjt:  RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY

Query:  HRP
        HRP
Subjt:  HRP

A0A6J1KPN2 protein GDAP2 homolog9.8e-5196.12Show/hide
Query:  RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY
        RPDMGWMKRLQQILGRKHQRNL AIYVLHPTFGLKAAV AMQLLVDN VW+KVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY
Subjt:  RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY

Query:  HRP
        HRP
Subjt:  HRP

SwissProt top hitse value%identityAlignment
Q07960 Rho GTPase-activating protein 19.0e-0929.55Show/hide
Query:  YGLYTVSRPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHD
        +GL + ++P + W++   +   RK+++N+ A+Y++HPT  +K  ++  + L+      K+ Y++ L +L ++V  EQL IP  V ++D
Subjt:  YGLYTVSRPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHD

Q54TH9 Rho GTPase-activating protein gacY7.8e-1338.27Show/hide
Query:  SRPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQH
        ++P M WMK++  I  RK+++NL  +Y++HPT  +K  +   +  + +  W K+ YID L +LFK  PREQL +P+ +  H
Subjt:  SRPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQH

Q5CZL1 Ganglioside-induced differentiation-associated protein 29.0e-0935.63Show/hide
Query:  SRPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNG
        + PD  ++K +  I+  K+++NL A+Y +HPTF  K +         + +  KV  ++ L QLF  VP EQ+ IP FV  +D   NG
Subjt:  SRPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNG

Q5FWK3 Rho GTPase-activating protein 19.0e-0929.55Show/hide
Query:  YGLYTVSRPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHD
        +GL + ++P + W++   +   RK+++N+ A+Y++HPT  +K  ++  + L+      K+ Y++ L +L ++V  EQL IP  V ++D
Subjt:  YGLYTVSRPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHD

Q9CXP4 Rho GTPase-activating protein 84.0e-0934.09Show/hide
Query:  YGLYTVSRPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHD
        YGL + ++P +GW++   +   RK+++NL A+YV+HPT  +KA     + L+ +    KV Y   L +L +++  +QL IP  V ++D
Subjt:  YGLYTVSRPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHD

Arabidopsis top hitse value%identityAlignment
AT1G69340.1 appr-1-p processing enzyme family protein4.1e-4986.41Show/hide
Query:  RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY
        +PD+GWMKRL+QILGRKHQRNL AIYVLHPTF LKA +L MQ  VDN VW KVVY DRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY
Subjt:  RPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVY

Query:  HRP
         RP
Subjt:  HRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATCCAACTTCTCTGACCATGTTTATGGTCTATATACTGTTAGTCGGCCAGACATGGGATGGATGAAGAGATTGCAGCAGATTCTTGGCCGAAAACACCAGCGTAA
CCTTCATGCAATATATGTTCTTCACCCAACCTTTGGATTGAAAGCTGCAGTATTGGCCATGCAATTGCTTGTGGATAATACGGTATGGCACAAAGTTGTGTACATTGATC
GACTACTGCAGCTGTTCAAATATGTTCCTCGCGAGCAGTTGACCATCCCTGATTTTGTATTTCAGCACGACTTAGAAGTAAATGGAGGGAAGGGCCTGATTGTGGATCCT
CGAACAAAATACGTATACCATCGGCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTATCCAACTTCTCTGACCATGTTTATGGTCTATATACTGTTAGTCGGCCAGACATGGGATGGATGAAGAGATTGCAGCAGATTCTTGGCCGAAAACACCAGCGTAA
CCTTCATGCAATATATGTTCTTCACCCAACCTTTGGATTGAAAGCTGCAGTATTGGCCATGCAATTGCTTGTGGATAATACGGTATGGCACAAAGTTGTGTACATTGATC
GACTACTGCAGCTGTTCAAATATGTTCCTCGCGAGCAGTTGACCATCCCTGATTTTGTATTTCAGCACGACTTAGAAGTAAATGGAGGGAAGGGCCTGATTGTGGATCCT
CGAACAAAATACGTATACCATCGGCCTTAACATCAAGGAAAATGTATGGATAATTCGTCAAGCCACAAATCACAGCATTGGCCATGGTTTTTATGCTGCTTAATCATATC
ATTTAGCGTCTGTTTTTAGGTGGGTAGGTGTTGAATATGTTTATAGAAATGGTATCCCATTTTCTTTCATTTTTTATTCCTAAAGTATTGGTTTTTTTTGTCTTGTGAAG
GTGAAATTACGTTATTCCTTTTGTATGTTATGTTGGATGAGCTTTTAATAAAATGGAAGTGGTTTGTTGAAATTTATATTAGGTGATCTGTTCACGATTTATATTCATCT
TGTTCACGATTGTTTTGGCAATGTGATTATGGAAAATGTGGTCTGTTCTGCTATATCAATGTAACCAACTTATCGATGTTTAATATCGGGATCTTCAAG
Protein sequenceShow/hide protein sequence
MLSNFSDHVYGLYTVSRPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNTVWHKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDP
RTKYVYHRP