; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G017430 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G017430
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionANK_REP_REGION domain-containing protein
Genome locationchr02:23121992..23123990
RNA-Seq ExpressionLsi02G017430
SyntenyLsi02G017430
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002110 - Ankyrin repeat
IPR020683 - Ankyrin repeat-containing domain
IPR036770 - Ankyrin repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029991.1 26S proteasome non-ATPase regulatory subunit 10, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-4867.06Show/hide
Query:  MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD
        MDMEIDASKD+RLIKDEDLFKAAETGDSSAF ALAP QLSQSLSLRNED RSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD

Query:  ILDILLSAGPWENQDHYGINSLAANMGTTSWSSVDMIIASSNPKKTKLHEAHHAYQLTCLHAKPCPTSMH
        ILDILLS G   N  + G  +      +  W  +   + S   K     +A    +  C+    C T +H
Subjt:  ILDILLSAGPWENQDHYGINSLAANMGTTSWSSVDMIIASSNPKKTKLHEAHHAYQLTCLHAKPCPTSMH

XP_022946193.1 26S proteasome non-ATPase regulatory subunit 10 [Cucurbita moschata]2.8e-4872.33Show/hide
Query:  MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD
        MDMEIDASKD+RLIKDEDLFKAAETGDSSAF ALAP QLSQSLSLRNED RSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD

Query:  ILDILLSAGPWENQDHYGINSLAANMGTTSWSSVDMII----ASSNPKK----TKLHEA
        ILDILLS G   N  + G  +      +  W  +   +    A  NPK     T LH A
Subjt:  ILDILLSAGPWENQDHYGINSLAANMGTTSWSSVDMII----ASSNPKK----TKLHEA

XP_022999411.1 26S proteasome non-ATPase regulatory subunit 10 [Cucurbita maxima]1.8e-4771.7Show/hide
Query:  MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD
        MDMEIDASKD+RLIKDEDLFKAAETGDSSAF ALAP QLSQSLSLRNED RSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD

Query:  ILDILLSAGPWENQDHYGINSLAANMGTTSWSSVDMII----ASSNPKK----TKLHEA
        ILDILLS     N  + G  +      +  W  +   +    A  NPK     T LH A
Subjt:  ILDILLSAGPWENQDHYGINSLAANMGTTSWSSVDMII----ASSNPKK----TKLHEA

XP_023545436.1 26S proteasome non-ATPase regulatory subunit 10 [Cucurbita pepo subsp. pepo]2.8e-4872.33Show/hide
Query:  MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD
        MDMEIDASKD+RLIKDEDLFKAAETGDSSAF ALAP QLSQSLSLRNED RSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD

Query:  ILDILLSAGPWENQDHYGINSLAANMGTTSWSSVDMII----ASSNPKK----TKLHEA
        ILDILLS G   N  + G  +      +  W  +   +    A  NPK     T LH A
Subjt:  ILDILLSAGPWENQDHYGINSLAANMGTTSWSSVDMII----ASSNPKK----TKLHEA

XP_038890172.1 26S proteasome non-ATPase regulatory subunit 10 [Benincasa hispida]2.2e-4876.39Show/hide
Query:  MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD
        MDMEID SKDVRLIKDEDLFKAAETGDSSAFTAL PQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQS KLINCADEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD

Query:  ILDILLSAGPWENQDHYGINSLAANMGTTSWSSVDMIIASSNPK
        ILDILLS G   N  + G  +      +  W  +   + S   K
Subjt:  ILDILLSAGPWENQDHYGINSLAANMGTTSWSSVDMIIASSNPK

TrEMBL top hitse value%identityAlignment
A0A0A0KTY4 ANK_REP_REGION domain-containing protein1.3e-4673.61Show/hide
Query:  MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD
        MDMEIDASKDV LIKD DLFKAAETGDSS FTAL P QLSQSLSLRNEDDRSLLHVAVSSGHADVVKIL TADQSTK+INCADEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD

Query:  ILDILLSAGPWENQDHYGINSLAANMGTTSWSSVDMIIASSNPK
        ILDILLS G   N  + G  +      +  W  +   + S   K
Subjt:  ILDILLSAGPWENQDHYGINSLAANMGTTSWSSVDMIIASSNPK

A0A1S3CPG1 26S proteasome non-ATPase regulatory subunit 101.3e-4672.92Show/hide
Query:  MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD
        MDMEIDASKDVRLI D+DLFKAAETGDSS FTAL P QLSQSLSLRNEDDRSLLHVAVSSGHADVVKIL TADQSTK+INCADEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD

Query:  ILDILLSAGPWENQDHYGINSLAANMGTTSWSSVDMIIASSNPK
        ILD LLS G   N  + G  +      +  W  +   + S   K
Subjt:  ILDILLSAGPWENQDHYGINSLAANMGTTSWSSVDMIIASSNPK

A0A5A7TER9 26S proteasome non-ATPase regulatory subunit 101.3e-4672.92Show/hide
Query:  MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD
        MDMEIDASKDVRLI D+DLFKAAETGDSS FTAL P QLSQSLSLRNEDDRSLLHVAVSSGHADVVKIL TADQSTK+INCADEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD

Query:  ILDILLSAGPWENQDHYGINSLAANMGTTSWSSVDMIIASSNPK
        ILD LLS G   N  + G  +      +  W  +   + S   K
Subjt:  ILDILLSAGPWENQDHYGINSLAANMGTTSWSSVDMIIASSNPK

A0A6J1G342 26S proteasome non-ATPase regulatory subunit 101.4e-4872.33Show/hide
Query:  MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD
        MDMEIDASKD+RLIKDEDLFKAAETGDSSAF ALAP QLSQSLSLRNED RSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD

Query:  ILDILLSAGPWENQDHYGINSLAANMGTTSWSSVDMII----ASSNPKK----TKLHEA
        ILDILLS G   N  + G  +      +  W  +   +    A  NPK     T LH A
Subjt:  ILDILLSAGPWENQDHYGINSLAANMGTTSWSSVDMII----ASSNPKK----TKLHEA

A0A6J1KCY7 26S proteasome non-ATPase regulatory subunit 108.9e-4871.7Show/hide
Query:  MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD
        MDMEIDASKD+RLIKDEDLFKAAETGDSSAF ALAP QLSQSLSLRNED RSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD

Query:  ILDILLSAGPWENQDHYGINSLAANMGTTSWSSVDMII----ASSNPKK----TKLHEA
        ILDILLS     N  + G  +      +  W  +   +    A  NPK     T LH A
Subjt:  ILDILLSAGPWENQDHYGINSLAANMGTTSWSSVDMII----ASSNPKK----TKLHEA

SwissProt top hitse value%identityAlignment
O75832 26S proteasome non-ATPase regulatory subunit 101.6e-0640.54Show/hide
Query:  QSLSLR-NEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAGPWEN
        +SL+ R ++D R+ LH A S+GH ++V+ L    Q    +N  D+ GW+P+H AAS GR +I+  LL  G   N
Subjt:  QSLSLR-NEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAGPWEN

Q5RJK8 Acyl-CoA-binding domain-containing protein 61.1e-0531.58Show/hide
Query:  KDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAG
        +D+++F      +    T  A +  +  +++ +E+ R+LLH A   GH ++VK+L   +     INC D EG   +H AA+   SDI+++LL +G
Subjt:  KDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAG

Q9BZL4 Protein phosphatase 1 regulatory subunit 12C3.6e-0636.26Show/hide
Query:  LFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAG
        + +AA+ G  +     AP      L   N D  S LH A    + +VV+ L    +    +N AD EGW P+H AAS G  DI   LLS G
Subjt:  LFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAG

Q9Z2X2 26S proteasome non-ATPase regulatory subunit 102.8e-0640.54Show/hide
Query:  QSLSLR-NEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAGPWEN
        +SL+ R ++D R+ LH A S+GH ++V+ L    Q    +N  D+ GW+P+H AAS GR +I+  LL  G   N
Subjt:  QSLSLR-NEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAGPWEN

Q9Z2X3 26S proteasome non-ATPase regulatory subunit 103.6e-0640.54Show/hide
Query:  QSLSLR-NEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAGPWEN
        +SL+ R ++D R+ LH A S+GH ++V+ L    Q    +N  D+ GW+P+H AAS GR +I+  LL  G   N
Subjt:  QSLSLR-NEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAGPWEN

Arabidopsis top hitse value%identityAlignment
AT2G03430.1 Ankyrin repeat family protein9.1e-2951.69Show/hide
Query:  MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD
        M++  D +K +R   DE+LFKAAE GDSS F +L+ +QLS+SL+ RNED RSLLHVA S GH+ +VK+L+++D++  +IN  D+EGWAP+HSAASIG ++
Subjt:  MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSD

Query:  ILDILLSAGPWENQDHYG
        ++++LL+ G   N  + G
Subjt:  ILDILLSAGPWENQDHYG

AT3G01750.1 Ankyrin repeat family protein1.8e-0535.29Show/hide
Query:  LSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAGP
        L+ R++   ++LH A   G   VVK L  +  S  L++  D +G   +H AA  G +D++D+L+SA P
Subjt:  LSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAGP

AT3G09550.1 Ankyrin repeat family protein1.8e-0529.59Show/hide
Query:  DVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLS
        +V  + +  LF AAE G+      L P    +SL  +N      LH+A S GH  +V++L   +   +L     +    P+ SAA+ G S++++ LL+
Subjt:  DVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLS

AT5G12320.1 ankyrin repeat family protein9.2e-0532.63Show/hide
Query:  KDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAG
        K +DL +AA   D      LA   L  SL  R+   R+ LH+A ++GH  +V+ L +       IN  ++E  AP+H A   G  +++  L+ AG
Subjt:  KDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAG

AT5G40160.1 Ankyrin repeat family protein2.0e-0436.92Show/hide
Query:  LRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAG
        L++ D  + +H AV  G    VK+L   +     +N AD EGW P+H A      DI  ILL+ G
Subjt:  LRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATGGAAATCGATGCTTCCAAAGATGTTCGTCTAATCAAAGACGAAGATCTTTTCAAAGCCGCAGAGACCGGCGATTCTTCCGCTTTTACTGCCCTCGCACCACA
GCAGCTTTCTCAATCTCTCTCCCTAAGAAATGAGGATGACCGCTCTCTTCTCCATGTTGCCGTCTCTTCAGGCCACGCCGATGTGGTAAAGATATTGGCTACTGCTGATC
AGTCTACTAAATTAATTAACTGTGCCGATGAGGAAGGTTGGGCACCGATTCATTCTGCTGCTAGCATTGGGAGGTCTGATATTTTAGATATCTTGTTGAGCGCAGGCCCT
TGGGAGAACCAAGATCATTATGGTATAAATTCATTAGCAGCAAATATGGGTACCACAAGTTGGAGTAGTGTTGATATGATCATAGCCTCATCTAACCCTAAGAAGACCAA
ATTACATGAAGCTCACCATGCATACCAGCTCACTTGCTTGCACGCCAAGCCATGCCCCACAAGCATGCACGCGTACGAGTTGCGTGCAGACAAGCATGCCTCATGGAGCA
TGCATGACCTTCGCCTTAGAGGCCAGTCAGAAGACCTAGAACACACAACAGCCCATACACGAGCGCTCATGGTTGATGACACTCAACCTTGTGTGACCAGCGTGCAAACA
CCTACCAGCCCCAATTGCCCAATTGCAAGCGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATATGGAAATCGATGCTTCCAAAGATGTTCGTCTAATCAAAGACGAAGATCTTTTCAAAGCCGCAGAGACCGGCGATTCTTCCGCTTTTACTGCCCTCGCACCACA
GCAGCTTTCTCAATCTCTCTCCCTAAGAAATGAGGATGACCGCTCTCTTCTCCATGTTGCCGTCTCTTCAGGCCACGCCGATGTGGTAAAGATATTGGCTACTGCTGATC
AGTCTACTAAATTAATTAACTGTGCCGATGAGGAAGGTTGGGCACCGATTCATTCTGCTGCTAGCATTGGGAGGTCTGATATTTTAGATATCTTGTTGAGCGCAGGCCCT
TGGGAGAACCAAGATCATTATGGTATAAATTCATTAGCAGCAAATATGGGTACCACAAGTTGGAGTAGTGTTGATATGATCATAGCCTCATCTAACCCTAAGAAGACCAA
ATTACATGAAGCTCACCATGCATACCAGCTCACTTGCTTGCACGCCAAGCCATGCCCCACAAGCATGCACGCGTACGAGTTGCGTGCAGACAAGCATGCCTCATGGAGCA
TGCATGACCTTCGCCTTAGAGGCCAGTCAGAAGACCTAGAACACACAACAGCCCATACACGAGCGCTCATGGTTGATGACACTCAACCTTGTGTGACCAGCGTGCAAACA
CCTACCAGCCCCAATTGCCCAATTGCAAGCGTGTGA
Protein sequenceShow/hide protein sequence
MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAGP
WENQDHYGINSLAANMGTTSWSSVDMIIASSNPKKTKLHEAHHAYQLTCLHAKPCPTSMHAYELRADKHASWSMHDLRLRGQSEDLEHTTAHTRALMVDDTQPCVTSVQT
PTSPNCPIASV