; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G017530 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G017530
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionZinc finger protein 5
Genome locationchr02:23252302..23252805
RNA-Seq ExpressionLsi02G017530
SyntenyLsi02G017530
Gene Ontology termsGO:0010090 - trichome morphogenesis (biological process)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044299 - Zinc finger protein GIS3/ZFP5/ZFP6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038869.1 zinc finger protein 5 [Cucumis melo var. makuwa]1.5e-4363.93Show/hide
Query:  MDKPFSFDFLSPISSSHNKPPPPFRLFGIELIN--VPIPTEPKQ------------SDDSPIT-RLCGNLADRPIRS-KSRT-FHCQYCLKEFTNSQALG
        MDK FSFDFL    SS NK   P RLFGIELIN   P   E K+            S  S IT RLCGNL DRP+R+ K+RT FHCQYCLKEFTNSQALG
Subjt:  MDKPFSFDFLSPISSSHNKPPPPFRLFGIELIN--VPIPTEPKQ------------SDDSPIT-RLCGNLADRPIRS-KSRT-FHCQYCLKEFTNSQALG

Query:  GHQNAHKKERLKQKRLQIEAQNSSLHNYLQNYFNSHFAHESEGSHISFSFRTTADLEFHHNGCTVAAADNPASAASQFHLFPF
        GHQNAHKKERLKQKRLQIEAQ SSL  YLQNYFNSHF+HE +GSHISF+FRT+ D           AA +PAS A +F LFPF
Subjt:  GHQNAHKKERLKQKRLQIEAQNSSLHNYLQNYFNSHFAHESEGSHISFSFRTTADLEFHHNGCTVAAADNPASAASQFHLFPF

KAG6599021.1 Zinc finger protein GIS3, partial [Cucurbita argyrosperma subsp. sororia]3.7e-3472.48Show/hide
Query:  RLFGIELINVPIPTEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSLHNYLQNYFNSHFAHES
        RLFGIEL+++P     ++  DSP+T LCGNL DRP+RSK R F C+YCLKEFTNSQALGGHQNAHKKERLK+K LQI+AQNSSL +YLQNY+NSHFA ES
Subjt:  RLFGIELINVPIPTEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSLHNYLQNYFNSHFAHES

Query:  EGSHISFSF
         G HISF F
Subjt:  EGSHISFSF

XP_004143824.1 zinc finger protein 5 [Cucumis sativus]1.8e-4465.17Show/hide
Query:  MDKPFSFDFLSPISSSHNKPPPPFRLFGIELINVPIPTEPKQ---------SDDSPIT-RLCGNLADRPIRS-KSRT-FHCQYCLKEFTNSQALGGHQNA
        MDK FSFDFL    SS  K   P RLFGIELINVP   E K+         S  S IT RLC NL DRP+R+ ++RT FHCQYCLKEFTNSQALGGHQNA
Subjt:  MDKPFSFDFLSPISSSHNKPPPPFRLFGIELINVPIPTEPKQ---------SDDSPIT-RLCGNLADRPIRS-KSRT-FHCQYCLKEFTNSQALGGHQNA

Query:  HKKERLKQKRLQIEAQNSSLHNYLQNYFNSHFAHESEGSHISFSFRTTADLEFHHNGCTVAAADNPASAASQFHLFPF
        HKKERLKQKRLQIEAQNSSL  YLQ YFNSHF+HE +GSHISF+FRT       +N  +VA+ D PAS A +F LFPF
Subjt:  HKKERLKQKRLQIEAQNSSLHNYLQNYFNSHFAHESEGSHISFSFRTTADLEFHHNGCTVAAADNPASAASQFHLFPF

XP_023520460.1 zinc finger protein 5-like [Cucurbita pepo subsp. pepo]9.8e-3574.31Show/hide
Query:  RLFGIELINVPIPTEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSLHNYLQNYFNSHFAHES
        RLFGIEL+++P   E ++  DSP+T LCGNL DRP+RSK R F CQYCLKEFTNSQALGGHQNAHKKERLK+K LQI+AQNSSL +YLQNY+NSHFA ES
Subjt:  RLFGIELINVPIPTEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSLHNYLQNYFNSHFAHES

Query:  EGSHISFSF
        +G HISF F
Subjt:  EGSHISFSF

XP_038889251.1 zinc finger protein 5-like [Benincasa hispida]2.8e-5070.06Show/hide
Query:  MDKPFSFDFLSPISSSHNKPPPPFRLFGIELINVPIPTEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQ
        MDK FSFDFL     SH K   P RLFGIELIN+    E  +S  S +TRLCG L DRP+    RTFHCQYC KEFTNSQALGGHQNAHKKERLK+K+LQ
Subjt:  MDKPFSFDFLSPISSSHNKPPPPFRLFGIELINVPIPTEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQ

Query:  IEAQNSSLHNYLQNYFNSHFAHESEGSHISFSFRTTADLEFHHNGCTVAAADNPASAASQFHLFPFL
        I+AQ SSLH+YLQNYFNSHFA E EGSHI  SFRTT  LEFHHNG  VAA+D P  +AS+FHLFPFL
Subjt:  IEAQNSSLHNYLQNYFNSHFAHESEGSHISFSFRTTADLEFHHNGCTVAAADNPASAASQFHLFPFL

TrEMBL top hitse value%identityAlignment
A0A0A0KNG0 C2H2-type domain-containing protein1.2e-3070.64Show/hide
Query:  RPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSLHNYLQNYFNSHFAHESEGSHISFSFRTTADLEFHHNGCTVAAADNPASA
        R +R+++  FHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSL  YLQ YFNSHF+HE +GSHISF+FRT       +N  +VA+ D PAS 
Subjt:  RPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSLHNYLQNYFNSHFAHESEGSHISFSFRTTADLEFHHNGCTVAAADNPASA

Query:  ASQFHLFPF
        A +F LFPF
Subjt:  ASQFHLFPF

A0A218WUW1 zinc finger protein 5-like2.7e-1448.98Show/hide
Query:  SSSHNKPPPPFRLFGIELINVPIPTEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSLHNY
        SS+ NK     RLFG ELI+     +P    D           + P  S  + F CQYCLKEF NSQALGGHQNAHKKER+K+KRLQ++A+ + L  Y
Subjt:  SSSHNKPPPPFRLFGIELINVPIPTEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSLHNY

A0A251U1C5 Putative zinc finger C2H2-type/integrase DNA-binding domain-containing protein1.4e-1542.06Show/hide
Query:  RLFGIELINVPIP--TEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSLHNYLQNY--FNSHF
        +LFG+EL++      ++ + S+            ++ + +K + F C+YC KEF NSQALGGHQNAHKKERLK+KRLQ+EA+   ++ YLQ Y  +N H+
Subjt:  RLFGIELINVPIP--TEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSLHNYLQNY--FNSHF

Query:  AHESEGSHISFSFRTTADLEFHHNGC
          E+E   ISFS     DL    + C
Subjt:  AHESEGSHISFSFRTTADLEFHHNGC

A0A5A7TC61 Zinc finger protein 57.3e-4463.93Show/hide
Query:  MDKPFSFDFLSPISSSHNKPPPPFRLFGIELIN--VPIPTEPKQ------------SDDSPIT-RLCGNLADRPIRS-KSRT-FHCQYCLKEFTNSQALG
        MDK FSFDFL    SS NK   P RLFGIELIN   P   E K+            S  S IT RLCGNL DRP+R+ K+RT FHCQYCLKEFTNSQALG
Subjt:  MDKPFSFDFLSPISSSHNKPPPPFRLFGIELIN--VPIPTEPKQ------------SDDSPIT-RLCGNLADRPIRS-KSRT-FHCQYCLKEFTNSQALG

Query:  GHQNAHKKERLKQKRLQIEAQNSSLHNYLQNYFNSHFAHESEGSHISFSFRTTADLEFHHNGCTVAAADNPASAASQFHLFPF
        GHQNAHKKERLKQKRLQIEAQ SSL  YLQNYFNSHF+HE +GSHISF+FRT+ D           AA +PAS A +F LFPF
Subjt:  GHQNAHKKERLKQKRLQIEAQNSSLHNYLQNYFNSHFAHESEGSHISFSFRTTADLEFHHNGCTVAAADNPASAASQFHLFPF

A0A6J1DUD1 zinc finger protein 5-like6.7e-2954.61Show/hide
Query:  MDKPFSFDFLSPISSSHNKPPPPFRLFGIELINVPIPTEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQ
        M+K F  DF+SP+ SS  K     RLFG EL+  P       ++DSP+T LCG++ D PIRSK   F CQYC+K+F+N  ALGGHQNAHKKERLK+KRLQ
Subjt:  MDKPFSFDFLSPISSSHNKPPPPFRLFGIELINVPIPTEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQ

Query:  IEAQNSSLHNYLQNYFNSH-----FAHESEGSHISFSFRTT
        ++A+NSSLH YLQNY ++      F H+ EGSH + SF T+
Subjt:  IEAQNSSLHNYLQNYFNSH-----FAHESEGSHISFSFRTT

SwissProt top hitse value%identityAlignment
Q39264 Zinc finger protein 52.2e-1345.28Show/hide
Query:  SSSHNKPPPPFRLFGIELIN----VPIPTEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSLH
        SSS +      +LFG ELI+      I T    S  +  T L          +  +   CQYC KEF NSQALGGHQNAHKKERLK+KRLQ++A+ +S+ 
Subjt:  SSSHNKPPPPFRLFGIELIN----VPIPTEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSLH

Query:  NYLQNY
         YL N+
Subjt:  NYLQNY

Q39265 Zinc finger protein 67.4e-0969.05Show/hide
Query:  SKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEA
        S+SR + CQYC +EF NSQALGGHQNAHKKER   KR Q+ A
Subjt:  SKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEA

Q84WI0 Zinc finger protein GIS1.1e-0735.85Show/hide
Query:  SFDFLSPISSSHNKPPPPFRLFGIEL-------------INVPIPTEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKE
        SF  L  I    +K P P R+FG +                 P  T+ K+ ++    +   N  D    S +R F C YC + F  SQALGGHQNAHK+E
Subjt:  SFDFLSPISSSHNKPPPPFRLFGIEL-------------INVPIPTEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKE

Query:  RLKQKR
        R   KR
Subjt:  RLKQKR

Q9C9H1 Zinc finger protein GIS35.6e-0959.57Show/hide
Query:  RTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSLHNY
        R + CQYC +EF NSQALGGHQNAHKKER + KR Q++A  ++  N+
Subjt:  RTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSLHNY

Q9FG05 Zinc finger protein GIS23.1e-0731.15Show/hide
Query:  SFDFLSPISSSHNKPPPPFRLFGIELINVPIPTEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQN
        ++DF++   +S +    P RLFG E       +E K + +        N       +K + F C YC + F  SQALGGHQNAHK+ER + KR  + +  
Subjt:  SFDFLSPISSSHNKPPPPFRLFGIELINVPIPTEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQN

Query:  SSLHNYLQNYFNSHFAHESEGS
        ++  +  QN+  +   +E   S
Subjt:  SSLHNYLQNYFNSHFAHESEGS

Arabidopsis top hitse value%identityAlignment
AT1G10480.1 zinc finger protein 51.6e-1445.28Show/hide
Query:  SSSHNKPPPPFRLFGIELIN----VPIPTEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSLH
        SSS +      +LFG ELI+      I T    S  +  T L          +  +   CQYC KEF NSQALGGHQNAHKKERLK+KRLQ++A+ +S+ 
Subjt:  SSSHNKPPPPFRLFGIELIN----VPIPTEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSLH

Query:  NYLQNY
         YL N+
Subjt:  NYLQNY

AT1G67030.1 zinc finger protein 65.2e-1069.05Show/hide
Query:  SKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEA
        S+SR + CQYC +EF NSQALGGHQNAHKKER   KR Q+ A
Subjt:  SKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEA

AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein4.0e-1059.57Show/hide
Query:  RTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSLHNY
        R + CQYC +EF NSQALGGHQNAHKKER + KR Q++A  ++  N+
Subjt:  RTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSLHNY

AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein7.6e-0935.85Show/hide
Query:  SFDFLSPISSSHNKPPPPFRLFGIEL-------------INVPIPTEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKE
        SF  L  I    +K P P R+FG +                 P  T+ K+ ++    +   N  D    S +R F C YC + F  SQALGGHQNAHK+E
Subjt:  SFDFLSPISSSHNKPPPPFRLFGIEL-------------INVPIPTEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKE

Query:  RLKQKR
        R   KR
Subjt:  RLKQKR

AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein2.2e-0831.15Show/hide
Query:  SFDFLSPISSSHNKPPPPFRLFGIELINVPIPTEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQN
        ++DF++   +S +    P RLFG E       +E K + +        N       +K + F C YC + F  SQALGGHQNAHK+ER + KR  + +  
Subjt:  SFDFLSPISSSHNKPPPPFRLFGIELINVPIPTEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQN

Query:  SSLHNYLQNYFNSHFAHESEGS
        ++  +  QN+  +   +E   S
Subjt:  SSLHNYLQNYFNSHFAHESEGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAACCATTCTCTTTTGATTTTCTCTCTCCAATCTCCTCTTCCCACAACAAGCCGCCGCCGCCGTTCAGACTATTCGGAATTGAACTAATCAACGTCCCAATCCC
AACAGAACCAAAACAATCAGACGACTCTCCAATTACCCGCCTGTGTGGGAATCTAGCTGACAGACCAATTAGAAGCAAGAGTAGAACATTCCACTGTCAGTACTGTTTGA
AAGAGTTCACAAACTCACAGGCACTGGGAGGCCATCAAAACGCCCACAAGAAGGAGAGACTGAAGCAGAAGAGACTCCAAATAGAAGCACAAAATTCCAGCCTTCATAAT
TACCTTCAAAACTATTTTAATTCCCATTTTGCCCATGAATCTGAAGGGTCCCACATCAGCTTCAGCTTCCGTACCACCGCCGATTTAGAGTTCCATCATAATGGCTGTAC
GGTTGCCGCAGCTGATAATCCTGCCTCTGCTGCTTCTCAATTTCATCTCTTTCCATTCCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAACCATTCTCTTTTGATTTTCTCTCTCCAATCTCCTCTTCCCACAACAAGCCGCCGCCGCCGTTCAGACTATTCGGAATTGAACTAATCAACGTCCCAATCCC
AACAGAACCAAAACAATCAGACGACTCTCCAATTACCCGCCTGTGTGGGAATCTAGCTGACAGACCAATTAGAAGCAAGAGTAGAACATTCCACTGTCAGTACTGTTTGA
AAGAGTTCACAAACTCACAGGCACTGGGAGGCCATCAAAACGCCCACAAGAAGGAGAGACTGAAGCAGAAGAGACTCCAAATAGAAGCACAAAATTCCAGCCTTCATAAT
TACCTTCAAAACTATTTTAATTCCCATTTTGCCCATGAATCTGAAGGGTCCCACATCAGCTTCAGCTTCCGTACCACCGCCGATTTAGAGTTCCATCATAATGGCTGTAC
GGTTGCCGCAGCTGATAATCCTGCCTCTGCTGCTTCTCAATTTCATCTCTTTCCATTCCTCTAA
Protein sequenceShow/hide protein sequence
MDKPFSFDFLSPISSSHNKPPPPFRLFGIELINVPIPTEPKQSDDSPITRLCGNLADRPIRSKSRTFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSLHN
YLQNYFNSHFAHESEGSHISFSFRTTADLEFHHNGCTVAAADNPASAASQFHLFPFL