; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G017880 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G017880
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionKH domain-containing protein
Genome locationchr02:23675366..23686273
RNA-Seq ExpressionLsi02G017880
SyntenyLsi02G017880
Gene Ontology termsGO:0048024 - regulation of mRNA splicing, via spliceosome (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR004087 - K Homology domain
IPR036612 - K Homology domain, type 1 superfamily
IPR045071 - KH domain-containing BBP-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK23230.1 KH domain-containing protein [Cucumis melo var. makuwa]3.5e-9684.48Show/hide
Query:  MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
        MSGLLQ SSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
Subjt:  MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV

Query:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTL--------LSGSNQQSHSKVLPAANAFTAIGALALLRAVTTK-NLNSETYV
        EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTL        +SGSNQQSHSKVLPAANAFTAIGALALLR V  K +   E  V
Subjt:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTL--------LSGSNQQSHSKVLPAANAFTAIGALALLRAVTTK-NLNSETYV

Query:  WIEDNLLTGQTRRADQRHNISSNAINDVTVQF
         +E +       + DQRH++SSNAINDVTV+F
Subjt:  WIEDNLLTGQTRRADQRHNISSNAINDVTVQF

XP_008447797.1 PREDICTED: KH domain-containing protein At5g56140 isoform X2 [Cucumis melo]2.6e-7591.62Show/hide
Query:  MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
        MSGLLQ SSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
Subjt:  MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV

Query:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHSKVLPAANA
        EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTL    +  S S V P  N+
Subjt:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHSKVLPAANA

XP_016900476.1 PREDICTED: KH domain-containing protein At5g56140 isoform X1 [Cucumis melo]2.6e-7591.62Show/hide
Query:  MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
        MSGLLQ SSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
Subjt:  MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV

Query:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHSKVLPAANA
        EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTL    +  S S V P  N+
Subjt:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHSKVLPAANA

XP_038897899.1 KH domain-containing protein At5g56140 isoform X1 [Benincasa hispida]3.1e-7692.22Show/hide
Query:  MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
        MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
Subjt:  MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV

Query:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHSKVLPAANA
        EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTL    +  S S V P  N+
Subjt:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHSKVLPAANA

XP_038897900.1 KH domain-containing protein At5g56140 isoform X2 [Benincasa hispida]3.1e-7692.22Show/hide
Query:  MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
        MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
Subjt:  MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV

Query:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHSKVLPAANA
        EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTL    +  S S V P  N+
Subjt:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHSKVLPAANA

TrEMBL top hitse value%identityAlignment
A0A0A0K3M6 KH domain-containing protein4.1e-7489.82Show/hide
Query:  MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
        MSGLLQ SSAQNWL+SQGSSSGLIVKRTIRVDVPV+ FPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
Subjt:  MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV

Query:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHSKVLPAANA
        EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTL    +  S S V P  N+
Subjt:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHSKVLPAANA

A0A1S3BI94 KH domain-containing protein At5g56140 isoform X21.3e-7591.62Show/hide
Query:  MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
        MSGLLQ SSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
Subjt:  MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV

Query:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHSKVLPAANA
        EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTL    +  S S V P  N+
Subjt:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHSKVLPAANA

A0A1S4DWW8 KH domain-containing protein At5g56140 isoform X11.3e-7591.62Show/hide
Query:  MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
        MSGLLQ SSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
Subjt:  MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV

Query:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHSKVLPAANA
        EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTL    +  S S V P  N+
Subjt:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHSKVLPAANA

A0A5D3DIN0 KH domain-containing protein1.7e-9684.48Show/hide
Query:  MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
        MSGLLQ SSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
Subjt:  MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV

Query:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTL--------LSGSNQQSHSKVLPAANAFTAIGALALLRAVTTK-NLNSETYV
        EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTL        +SGSNQQSHSKVLPAANAFTAIGALALLR V  K +   E  V
Subjt:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTL--------LSGSNQQSHSKVLPAANAFTAIGALALLRAVTTK-NLNSETYV

Query:  WIEDNLLTGQTRRADQRHNISSNAINDVTVQF
         +E +       + DQRH++SSNAINDVTV+F
Subjt:  WIEDNLLTGQTRRADQRHNISSNAINDVTVQF

A0A6J1CCS9 KH domain-containing protein At5g56140-like isoform X12.4e-7488.62Show/hide
Query:  MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
        MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDN+PNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV
Subjt:  MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV

Query:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHSKVLPAANA
        EAELPVEIIDARL+QA+EIL+DLLKP++ESHDFYKKQQLRELAMLNGTL    +  S S V P  N+
Subjt:  EAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHSKVLPAANA

SwissProt top hitse value%identityAlignment
Q0WLR1 KH domain-containing protein At4g264801.2e-6782.89Show/hide
Query:  SSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVE
        S A NWL+S GSSSGLIVKRTIRVD+PVD +PNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDP +E+MMRGKPGYEHLNEPLHILVEAELP+E
Subjt:  SSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVE

Query:  IIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHS
        I+DARLMQAREIL+DLL P+EE+HDFYKKQQLRELA+LNG+L    +  S S
Subjt:  IIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHS

Q75GR5 KH domain-containing protein SPIN11.1e-5266.21Show/hide
Query:  SAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEI
        ++ +W  +  S S  +VK+ +R+DVPVD++PN+NFVGR+LGPRGNSLKRVEAST CRV IRG+GSIKDP +E+ +RGKPGYEHL++PLHIL+EAE P  I
Subjt:  SAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEI

Query:  IDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGS
        IDARL  A+E++E+LLKP++ES DFYK+QQLRELAMLN TL   S
Subjt:  IDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGS

Q8GYR4 KH domain-containing protein At3g086203.0e-5062.67Show/hide
Query:  AQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEII
        A  W  +  S S   VKR +R+D+PVD +PN+NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP +EE ++GKPGYEHLNE LHIL+EA+LP++I+
Subjt:  AQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEII

Query:  DARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHS
        D +L QA+EI+E+L+KP++ES D+ K+QQLRELA+LN  L   S   S S
Subjt:  DARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHS

Q9FKT4 KH domain-containing protein At5g561401.6e-6782.89Show/hide
Query:  SSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVE
        S   NWL+S GSSSGLI KRTIRVD+PVDN+PN+NFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDP +EEMMRGKPGYEHLNEPLHILVEAELP+E
Subjt:  SSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVE

Query:  IIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHS
        I+DARLMQAREIL+DLL PMEE+HD YKKQQLRELA+LNGTL    +  S S
Subjt:  IIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHS

Q9ZVI3 KH domain-containing protein At2g386106.1e-5164.58Show/hide
Query:  PSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPV
        P    +W  + GS S   VKR +R+++PVDN+PN+NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP +E+ +RG+PGYEHLNE LHIL+EA+LP 
Subjt:  PSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPV

Query:  EIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLL
         I++ RL QA+EI+E+LLKP++ES DF K+QQLRELA+LN   L
Subjt:  EIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLL

Arabidopsis top hitse value%identityAlignment
AT2G38610.1 RNA-binding KH domain-containing protein4.3e-5264.58Show/hide
Query:  PSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPV
        P    +W  + GS S   VKR +R+++PVDN+PN+NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP +E+ +RG+PGYEHLNE LHIL+EA+LP 
Subjt:  PSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPV

Query:  EIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLL
         I++ RL QA+EI+E+LLKP++ES DF K+QQLRELA+LN   L
Subjt:  EIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLL

AT2G38610.2 RNA-binding KH domain-containing protein4.3e-5264.58Show/hide
Query:  PSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPV
        P    +W  + GS S   VKR +R+++PVDN+PN+NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP +E+ +RG+PGYEHLNE LHIL+EA+LP 
Subjt:  PSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPV

Query:  EIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLL
         I++ RL QA+EI+E+LLKP++ES DF K+QQLRELA+LN   L
Subjt:  EIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLL

AT3G08620.1 RNA-binding KH domain-containing protein2.1e-5162.67Show/hide
Query:  AQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEII
        A  W  +  S S   VKR +R+D+PVD +PN+NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP +EE ++GKPGYEHLNE LHIL+EA+LP++I+
Subjt:  AQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEII

Query:  DARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHS
        D +L QA+EI+E+L+KP++ES D+ K+QQLRELA+LN  L   S   S S
Subjt:  DARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHS

AT4G26480.1 RNA-binding KH domain-containing protein8.7e-6982.89Show/hide
Query:  SSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVE
        S A NWL+S GSSSGLIVKRTIRVD+PVD +PNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDP +E+MMRGKPGYEHLNEPLHILVEAELP+E
Subjt:  SSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVE

Query:  IIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHS
        I+DARLMQAREIL+DLL P+EE+HDFYKKQQLRELA+LNG+L    +  S S
Subjt:  IIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHS

AT5G56140.1 RNA-binding KH domain-containing protein1.1e-6882.89Show/hide
Query:  SSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVE
        S   NWL+S GSSSGLI KRTIRVD+PVDN+PN+NFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDP +EEMMRGKPGYEHLNEPLHILVEAELP+E
Subjt:  SSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVE

Query:  IIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHS
        I+DARLMQAREIL+DLL PMEE+HD YKKQQLRELA+LNGTL    +  S S
Subjt:  IIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGTTTATTACAACCCTCGTCAGCACAAAATTGGCTAAGTTCCCAAGGTAGTTCATCAGGTCTTATTGTGAAGAGAACCATCAGAGTAGACGTTCCTGTTGACAA
CTTCCCTAATTATAACTTTGTCGGCCGCCTTCTTGGACCCAGGGGAAACTCTCTCAAGCGAGTGGAGGCAAGTACTGATTGTCGAGTTTTGATTAGAGGGCGTGGTAGCA
TTAAGGATCCAGCTAGGGAAGAAATGATGAGAGGAAAACCAGGTTATGAGCATTTGAATGAGCCTCTCCACATCCTAGTTGAGGCGGAATTGCCAGTTGAAATTATTGAT
GCTCGCCTTATGCAAGCCCGTGAGATTCTTGAGGACTTGCTCAAACCAATGGAAGAATCTCATGACTTCTACAAGAAGCAACAGCTACGGGAGCTAGCTATGCTTAATGG
CACGCTTCTGTCTGGGAGTAATCAGCAGTCCCATTCCAAGGTGTTGCCTGCAGCCAATGCCTTCACTGCAATCGGGGCACTCGCACTCTTACGTGCAGTAACAACCAAGA
ACTTGAACTCAGAGACTTATGTTTGGATTGAGGATAATTTGTTGACAGGTCAAACCAGACGCGCTGACCAGAGGCATAACATATCTTCAAATGCAATAAATGATGTTACT
GTTCAATTCTAG
mRNA sequenceShow/hide mRNA sequence
CATATATGATATAACACAAATAATTTAAATACACGTATATAAATATATTTATAACATATAGATAGATAGATAGACAAGAAGGCACAGCAGTTGTAGTGTGCATAATTTTT
CCACCGACGCCAGATTGATAAGCGTCTGGTCGGGATCGCCACCGCCACCGCCGCCGTCATCGACTTCGAATCCTGGCCGTATCCATATCTACTCACGTCTCCGGAGGGAG
AGAAATGACGTCGTCTGCAGGCGGGATGTACATGGCTTTCTCTCCCTCTCCTACGGCTCCTCACTCTCCTCATCTTCCTGGTCTCCGCTCTCCGTCCTCTGCATCTGCTG
CTGCTCTACTTGAGCAAGAAAAGTATCTCTCTGAGTTATTGGCAGAGCGACAGAAACTTAGTCCGTTTATGCCTGTGCTCCCTAATAGTTATCGCTTGCTGAGCCAAGGT
GAACTTCGTAGCCTCAACGAAGTAGCTTGTTAAATATTGCGTGTAACCACACTATTGGGGAAGGCATCAGTTTTAGGTCAAAGTGGGCTTGAACATGCCAGCCCCCTGGC
TTCTGGAGGAATATTTTCAAATGGAGGTGCTGACTTGAGTGCATGGCCATCACGGTTTCAATCAGAAATGTCAGGTTTATTACAACCCTCGTCAGCACAAAATTGGCTAA
GTTCCCAAGGTAGTTCATCAGGTCTTATTGTGAAGAGAACCATCAGAGTAGACGTTCCTGTTGACAACTTCCCTAATTATAACTTTGTCGGCCGCCTTCTTGGACCCAGG
GGAAACTCTCTCAAGCGAGTGGAGGCAAGTACTGATTGTCGAGTTTTGATTAGAGGGCGTGGTAGCATTAAGGATCCAGCTAGGGAAGAAATGATGAGAGGAAAACCAGG
TTATGAGCATTTGAATGAGCCTCTCCACATCCTAGTTGAGGCGGAATTGCCAGTTGAAATTATTGATGCTCGCCTTATGCAAGCCCGTGAGATTCTTGAGGACTTGCTCA
AACCAATGGAAGAATCTCATGACTTCTACAAGAAGCAACAGCTACGGGAGCTAGCTATGCTTAATGGCACGCTTCTGTCTGGGAGTAATCAGCAGTCCCATTCCAAGGTG
TTGCCTGCAGCCAATGCCTTCACTGCAATCGGGGCACTCGCACTCTTACGTGCAGTAACAACCAAGAACTTGAACTCAGAGACTTATGTTTGGATTGAGGATAATTTGTT
GACAGGTCAAACCAGACGCGCTGACCAGAGGCATAACATATCTTCAAATGCAATAAATGATGTTACTGTTCAATTCTAG
Protein sequenceShow/hide protein sequence
MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIID
ARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLLSGSNQQSHSKVLPAANAFTAIGALALLRAVTTKNLNSETYVWIEDNLLTGQTRRADQRHNISSNAINDVT
VQF