; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G018090 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G018090
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSerine-rich protein-related, putative
Genome locationchr02:23886420..23886749
RNA-Seq ExpressionLsi02G018090
SyntenyLsi02G018090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048240.1 putative PGPS/D10 protein [Cucumis melo var. makuwa]4.6e-2574.71Show/hide
Query:  MPFTEFNLEELKQTS-NLLVSPSSQSIVAPKAPSSAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSVGSNLSDLARKSTDIMGSFTP
        M  TE NL +LK  + +LLVSPS  S  A K PSSAKANCLCSPTTHIGSFRCRHHRH GM+RGGSVGSNLSDLARK T+IMG F+P
Subjt:  MPFTEFNLEELKQTS-NLLVSPSSQSIVAPKAPSSAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSVGSNLSDLARKSTDIMGSFTP

KAG6607735.1 hypothetical protein SDJN03_01077, partial [Cucurbita argyrosperma subsp. sororia]3.2e-2663.21Show/hide
Query:  MDPKPDHKAPRPNDRNNHNHHHKMPFTEFNLEELKQTSNLLVSPSSQSIVAPKAPSSAKANCLCSPTTHIGSFRCRHHRHT-GMLRGGSVGSNLSDLARK
        MD KPDH+APRP  R++ +HH+K+ FT+F+LE+LK++  +LVSPS  S     +P +AK +CLCSPTTHIGSFRCRHHR + G+LRGGSVGSNLSDL RK
Subjt:  MDPKPDHKAPRPNDRNNHNHHHKMPFTEFNLEELKQTSNLLVSPSSQSIVAPKAPSSAKANCLCSPTTHIGSFRCRHHRHT-GMLRGGSVGSNLSDLARK

Query:  STDIMG
        S++ MG
Subjt:  STDIMG

KAG7024984.1 hypothetical protein SDJN02_13804, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-3776.15Show/hide
Query:  MDPKPDHKAPRPNDRNNHNHHHKMPFTEFNLEELKQTSNLLVSPSSQSIVAPKAPSSAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSVGSNLSDLARKS
        MD KPDH+APRP DRNN NHHHK  FT+F+LE+ KQ +NLL S  S+S+ APKAPSSAKA+CLCSPTTHIGSFRCRHHRHTGMLRG SVGSNLS+LA KS
Subjt:  MDPKPDHKAPRPNDRNNHNHHHKMPFTEFNLEELKQTSNLLVSPSSQSIVAPKAPSSAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSVGSNLSDLARKS

Query:  TDIMGSFTP
        TD+M S++P
Subjt:  TDIMGSFTP

KGN44385.1 hypothetical protein Csa_015645 [Cucumis sativus]9.6e-3971.79Show/hide
Query:  MDPKPDHKAPRPNDRNNHN--------HHHKMPFTEFNLEELKQTSNLLVSPSSQSIVAPKAPSSAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSVGSN
        MD K DH+APRPNDRNNHN        HHHKM FT+ NLE+LKQ   +LVSPS  S +A + PSSAKANCLCSPTTHIGSFRCRHHRH+GM+RGGSVGSN
Subjt:  MDPKPDHKAPRPNDRNNHN--------HHHKMPFTEFNLEELKQTSNLLVSPSSQSIVAPKAPSSAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSVGSN

Query:  LSDLARKSTDIMGSFTP
        LSDL RK T+I+GSF+P
Subjt:  LSDLARKSTDIMGSFTP

XP_010103953.1 uncharacterized protein LOC21403113 [Morus notabilis]7.9e-1754.72Show/hide
Query:  MDPKPDHKAPRPNDRNNHNHHHKMPFTEFNLEELKQTSNLLVSPSSQSIVAPKAPSSAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSVGSNLSDLARKS
        MD K + ++P+    NN N   K+P  + NL ELK+ ++LL SP +Q  V     SS + NCLCSPTTH GSFRCRHHR + MLRGGSVGSNLS+LARK 
Subjt:  MDPKPDHKAPRPNDRNNHNHHHKMPFTEFNLEELKQTSNLLVSPSSQSIVAPKAPSSAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSVGSNLSDLARKS

Query:  TDIMGS
          I  S
Subjt:  TDIMGS

TrEMBL top hitse value%identityAlignment
A0A0A0K3W3 Uncharacterized protein4.6e-3971.79Show/hide
Query:  MDPKPDHKAPRPNDRNNHN--------HHHKMPFTEFNLEELKQTSNLLVSPSSQSIVAPKAPSSAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSVGSN
        MD K DH+APRPNDRNNHN        HHHKM FT+ NLE+LKQ   +LVSPS  S +A + PSSAKANCLCSPTTHIGSFRCRHHRH+GM+RGGSVGSN
Subjt:  MDPKPDHKAPRPNDRNNHN--------HHHKMPFTEFNLEELKQTSNLLVSPSSQSIVAPKAPSSAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSVGSN

Query:  LSDLARKSTDIMGSFTP
        LSDL RK T+I+GSF+P
Subjt:  LSDLARKSTDIMGSFTP

A0A5A7TYF3 Putative PGPS/D10 protein2.2e-2574.71Show/hide
Query:  MPFTEFNLEELKQTS-NLLVSPSSQSIVAPKAPSSAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSVGSNLSDLARKSTDIMGSFTP
        M  TE NL +LK  + +LLVSPS  S  A K PSSAKANCLCSPTTHIGSFRCRHHRH GM+RGGSVGSNLSDLARK T+IMG F+P
Subjt:  MPFTEFNLEELKQTS-NLLVSPSSQSIVAPKAPSSAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSVGSNLSDLARKSTDIMGSFTP

A0A7J6EXD7 Uncharacterized protein6.5e-1755.91Show/hide
Query:  PNDRNNHNHHHKMPFTEFNLEELKQ-TSNLLVSPSSQSIVAPKAPSSAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSVGSNLSDLARKSTDI
        PN++    + +K+   E NLE+ K+ T  L+VSP +++    K+ SS ++NCLCSPTTH+GSFRCRHHR  GMLRGGSVGSNL+DL RKS+ I
Subjt:  PNDRNNHNHHHKMPFTEFNLEELKQ-TSNLLVSPSSQSIVAPKAPSSAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSVGSNLSDLARKSTDI

A0A7J6H8T3 Uncharacterized protein1.1e-1652.38Show/hide
Query:  MDPKPDHK-APRPNDRNNHNHHHKMPFTEFNLEELKQ-TSNLLVSPSSQSIVAPKAPSSAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSVGSNLSDLAR
        MD K + + +  PN++    + +K+   E NLE+ K+ T  L+VSP +++    K+ SS ++NCLCSPTTH+GSFRCRHHR  GMLRGGSVGSNL+DL R
Subjt:  MDPKPDHK-APRPNDRNNHNHHHKMPFTEFNLEELKQ-TSNLLVSPSSQSIVAPKAPSSAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSVGSNLSDLAR

Query:  KSTDI
        KS+ I
Subjt:  KSTDI

W9SBP1 Uncharacterized protein3.8e-1754.72Show/hide
Query:  MDPKPDHKAPRPNDRNNHNHHHKMPFTEFNLEELKQTSNLLVSPSSQSIVAPKAPSSAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSVGSNLSDLARKS
        MD K + ++P+    NN N   K+P  + NL ELK+ ++LL SP +Q  V     SS + NCLCSPTTH GSFRCRHHR + MLRGGSVGSNLS+LARK 
Subjt:  MDPKPDHKAPRPNDRNNHNHHHKMPFTEFNLEELKQTSNLLVSPSSQSIVAPKAPSSAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSVGSNLSDLARKS

Query:  TDIMGS
          I  S
Subjt:  TDIMGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67910.1 unknown protein8.7e-0652.08Show/hide
Query:  SSAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSV-GSNLSDLARKSTD
        S  K NCLCSPTTH GSFRCR HR   + R  S+  ++L D   K  D
Subjt:  SSAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSV-GSNLSDLARKSTD

AT1G67910.2 unknown protein8.7e-0652.08Show/hide
Query:  SSAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSV-GSNLSDLARKSTD
        S  K NCLCSPTTH GSFRCR HR   + R  S+  ++L D   K  D
Subjt:  SSAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSV-GSNLSDLARKSTD

AT3G13227.1 serine-rich protein-related4.9e-0966.67Show/hide
Query:  SSAKANCLCSPTTHIGSFRCRHHRHT---GMLRGGSVGSNLSDLA
        SS + NCLC+PTTH GSFRCR+HR     GM RG SV SNLS LA
Subjt:  SSAKANCLCSPTTHIGSFRCRHHRHT---GMLRGGSVGSNLSDLA

AT5G20370.1 serine-rich protein-related5.6e-0541.43Show/hide
Query:  NNHNHHHKMPFTEFNLEELKQTSNL---LVSPSS---QSIVAPKAPSSAKANCLCSPTTHIGSFRCRHHR
        NNH+HHH+    + +     +  NL     SP S    S+V   +    K  CLCSPTTH GSFRC  HR
Subjt:  NNHNHHHKMPFTEFNLEELKQTSNL---LVSPSS---QSIVAPKAPSSAKANCLCSPTTHIGSFRCRHHR

AT5G55980.1 serine-rich protein-related1.3e-0965Show/hide
Query:  SAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSVGSNLSDL
        S + NCLCSPTTH GSFRCR+HR   + R GS+GSNL+ L
Subjt:  SAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSVGSNLSDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCTAAACCAGATCATAAAGCTCCAAGGCCCAACGACAGAAACAACCATAATCACCACCACAAAATGCCATTCACAGAGTTCAATTTAGAAGAGCTTAAGCAAAC
TTCTAACCTGCTCGTTTCCCCGTCGTCGCAATCCATAGTGGCGCCCAAGGCTCCTTCCTCTGCCAAGGCGAATTGTCTCTGTTCTCCCACCACTCACATTGGCTCCTTCC
GCTGCCGGCACCATCGGCATACTGGTATGCTCCGCGGCGGCTCTGTTGGCTCTAATCTCTCCGATTTGGCTCGTAAATCTACCGACATTATGGGATCCTTTACGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCTAAACCAGATCATAAAGCTCCAAGGCCCAACGACAGAAACAACCATAATCACCACCACAAAATGCCATTCACAGAGTTCAATTTAGAAGAGCTTAAGCAAAC
TTCTAACCTGCTCGTTTCCCCGTCGTCGCAATCCATAGTGGCGCCCAAGGCTCCTTCCTCTGCCAAGGCGAATTGTCTCTGTTCTCCCACCACTCACATTGGCTCCTTCC
GCTGCCGGCACCATCGGCATACTGGTATGCTCCGCGGCGGCTCTGTTGGCTCTAATCTCTCCGATTTGGCTCGTAAATCTACCGACATTATGGGATCCTTTACGCCTTGA
Protein sequenceShow/hide protein sequence
MDPKPDHKAPRPNDRNNHNHHHKMPFTEFNLEELKQTSNLLVSPSSQSIVAPKAPSSAKANCLCSPTTHIGSFRCRHHRHTGMLRGGSVGSNLSDLARKSTDIMGSFTP