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Lsi02G018190 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G018190
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationchr02:24004902..24006981
RNA-Seq ExpressionLsi02G018190
SyntenyLsi02G018190
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030269.1 RPM1-interacting protein 4 [Cucurbita argyrosperma subsp. argyrosperma]4.3e-3389.74Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAGDPAKAPPVRYIHNPFSIWALDG
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GR   DPAKAPPVRYIHNPFS   L+G
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAGDPAKAPPVRYIHNPFSIWALDG
KAG7037321.1 RPM1-interacting protein 4 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-2792.42Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAGDPAKAPPVRY
        M DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GRP  +PAKAPPVRY
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAGDPAKAPPVRY
XP_008463014.1 PREDICTED: RPM1-interacting protein 4-like isoform X1 [Cucumis melo]9.2e-3694.87Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAGDPAKAPPVRYIHNPFSIWALDG
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR A DPAKAPPVRYIHN F IWALDG
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAGDPAKAPPVRYIHNPFSIWALDG
XP_008463015.1 PREDICTED: RPM1-interacting protein 4-like isoform X2 [Cucumis melo]1.2e-2791.04Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAGDPAKAPPVRYI
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR A DPAKAPP +++
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAGDPAKAPPVRYI
XP_038897827.1 protein NOI4 [Benincasa hispida]8.4e-2992.54Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAGDPAKAPPVRYI
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPA DPAKAPP +++
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAGDPAKAPPVRYI
TrEMBL top hitse value%identityAlignment
A0A1S3CI83 RPM1-interacting protein 4-like isoform X14.5e-3694.87Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAGDPAKAPPVRYIHNPFSIWALDG
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR A DPAKAPPVRYIHN F IWALDG
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAGDPAKAPPVRYIHNPFSIWALDG
A0A1S3CI91 RPM1-interacting protein 4-like isoform X25.9e-2891.04Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAGDPAKAPPVRYI
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR A DPAKAPP +++
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAGDPAKAPPVRYI
A0A5A7TZ14 RPM1-interacting protein 4-like isoform X22.9e-2796.83Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAGDPAKAPP
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR A DPAKAPP
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAGDPAKAPP
A0A6J1CEA3 RPM1-interacting protein 42.2e-2788.06Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAGDPAKAPPVRYI
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GRP  DP+KAPP +++
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAGDPAKAPPVRYI
A0A6J1ID15 uncharacterized protein LOC111474733 isoform X28.5e-2788.06Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAGDPAKAPPVRYI
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GR   DPAKAPP +++
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAGDPAKAPPVRYI
SwissProt top hitse value%identityAlignment
O22633 Protein NOI41.8e-2172.46Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRP-AGDPAKAPPVRYI
        M+DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H +   GDP+K  P +++
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRP-AGDPAKAPPVRYI
Q8GYN5 RPM1-interacting protein 42.7e-0642.86Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAH
        +K   +PKFG+WD N+P+SA+G+T IFNK R+E+ +G       +   H
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAH
Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein1.7e-1966.67Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAGDPAKAPPVRY
        M DKGRPLPKFGEWDVNDP+SAEGFTVIFNKAR+EKK GGK DSPGK +      G+  + P  ++
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAGDPAKAPPVRY
AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein9.6e-2376.12Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRP-AGDPAKAPPVR
        M+DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H +   GDP+K  PV+
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRP-AGDPAKAPPVR
AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein6.2e-2276.92Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRP-AGDPAKAPPVR
        DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H +   GDP+K  PV+
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRP-AGDPAKAPPVR
AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein8.1e-2273.13Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRP-AGDPAKAPPVRYI
        DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H +   GDP+K  P +++
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRP-AGDPAKAPPVRYI
AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein1.5e-1271.74Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKT----GGKPDS
        +KG+PLPKFGEWDVN+P SAEGFTVIF+KA DEKKT    G  P+S
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKT----GGKPDS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGACAAAGGTCGGCCATTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCAGCTGAGGGTTTCACCGTGATTTTTAACAAAGCTAGAGATGAGAAGAA
AACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGCCTGCAGGAGATCCTGCCAAGGCACCGCCTGTAAGATACATTCATAATCCTTTTTCTATTT
GGGCGTTGGATGGTTGA
mRNA sequenceShow/hide mRNA sequence
AATAGATTTCCGTATCCAATAAGCCCACTTTTAGCCCAATTTACAAAAGTCGCCTCTTTCTCTCTCTTTCTTTCAATCTTCCTCTCTTATTTTCTCTTCTTTGATTGATT
TGAAATTCCAATTTTTTTTCCTCGAAACGTTCTCTCTCTAGAATTCATGACGGACAAAGGTCGGCCATTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCAG
CTGAGGGTTTCACCGTGATTTTTAACAAAGCTAGAGATGAGAAGAAAACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGCCTGCAGGAGATCCT
GCCAAGGCACCGCCTGTAAGATACATTCATAATCCTTTTTCTATTTGGGCGTTGGATGGTTGACGTAGCTAGCATCTCTGTTCATAATAAAGTAGTTGGCATCTAAAAAA
TGATTCTTTTACACTTCTGGACAATTGTTAGTCAATGAATTTCTGAAATTGTTGCTTCTGATAGTATATTTAATGTATTTCAACCAATAGTTGCAAGCTTTTAGAGATCC
AAGAAATGAAAAGGGGAACATTAATATGTAACCATATAAACCAAATCTTCAAAATCTATAATTTTAAGAAAGGAAATATCAAGGTAACAATTAAAATAGGAATGAAAAAG
AAATACAAGTGGCTAGGGCCAATATAAAGGATTTAATAGTCAGGGAGGTTGGCATCTTGCCCTTATCTGTTCTAGAGAATGCTTCTTTTGCTCCTGGACAATTGTTTGGT
CTGTTGCTTTTGATAGTGTGTGTATTTATGCATGTGTATCTGCGTTGAGTTGAACTTTGTTCAAAATCTAAACTGAAACATGTTGGTAAAGTATCTAGAACTTAGTCTTA
AGGTGAGATGACATCACACCATTTAATGTAATAAATCAGAATTTCTTTGATTTTATATGCCTTGTTAGGAGCTTTATGTTCATGAAACATGAATTTCCTAGCTTTGTTTA
TCTTTGAGAGGGCTCTGGTTCAGGCATAAATATAGGTCTTTGAATGAAATGATTCGATCTCGGTGCTGCATTTACTCCTTTTTTTTTTACCTTATATATTGTATTTACAA
ATTTTCTTTGCCCTTTTTTCTTTCATGTGGATGATTATCAGAAGAAATGGCTTTGCTGTATCCAAAGTCCCCCTGCTGAATCTTGAGAAGGTTCGTTTAGAAGCCTCAGT
TGAAAAACTTCATATTATTCTGTAATTGTCTGCTGTGGCTTCTCAAATACAATGAACTTTCATGGAGCCTTGATGGTCCTGCTAAATTTTATGCAATTTCATGTAAATCT
GAGTGTTGTTGTTGTGGAGGAAAAAGTAAAGAAGACAAACATGTATTGTATTTATATTATTGATATGGTGGTTTTTTATTAGGAGATAAAGTTGCTATTCTGTCTTTGCC
TTTGGTGTGAGCTGTAAAGCTTTGCACTGGACCTTATGTATAATTGTGGCTGGTATAATTAATGTAATACAACTTTTGCTTTTCTTTC
Protein sequenceShow/hide protein sequence
MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAGDPAKAPPVRYIHNPFSIWALDG