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Lsi02G018240 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G018240
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionsperm mitochondrial-associated cysteine-rich protein-like
Genome locationchr02:24072101..24072496
RNA-Seq ExpressionLsi02G018240
SyntenyLsi02G018240
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607747.1 hypothetical protein SDJN03_01089, partial [Cucurbita argyrosperma subsp. sororia]1.9e-4171.21Show/hide
Query:  MFPAKFLALLVVFHLNSAVSATDDATMATPISCDNCTICQSACRPPP-YEPLPLSPPPPPLAEPEPLPVPVSPANCPPTIVQCCQFLPPPPPQATAVNGN
        M PAKFLAL++VFHL SA++A DDA+M TP SC+NC +CQSACRPPP  +PL   PPPPP+AEPEPLPVPV P NCPPTIVQCCQF+PPP P       N
Subjt:  MFPAKFLALLVVFHLNSAVSATDDATMATPISCDNCTICQSACRPPP-YEPLPLSPPPPPLAEPEPLPVPVSPANCPPTIVQCCQFLPPPPPQATAVNGN

Query:  IYTPIYNESSSSYVKVGLASVLAPVFWVAAIF
        IYTP YNES SS++K GL SVLAPVF VAAIF
Subjt:  IYTPIYNESSSSYVKVGLASVLAPVFWVAAIF

KAG7037325.1 hypothetical protein SDJN02_00950, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-4271.97Show/hide
Query:  MFPAKFLALLVVFHLNSAVSATDDATMATPISCDNCTICQSACRPPP-YEPLPLSPPPPPLAEPEPLPVPVSPANCPPTIVQCCQFLPPPPPQATAVNGN
        M PAKFLAL++VFHL SA++A DDA+M TP SC+NC +CQSACRPPP  +PL   PPPPP+AEPEPLPVPV PANCPPTIVQCCQF+PPP P       N
Subjt:  MFPAKFLALLVVFHLNSAVSATDDATMATPISCDNCTICQSACRPPP-YEPLPLSPPPPPLAEPEPLPVPVSPANCPPTIVQCCQFLPPPPPQATAVNGN

Query:  IYTPIYNESSSSYVKVGLASVLAPVFWVAAIF
        IYTP YNES SS++K GL SVLAPVF VAAIF
Subjt:  IYTPIYNESSSSYVKVGLASVLAPVFWVAAIF

KGN44024.1 hypothetical protein Csa_011878 [Cucumis sativus]1.5e-4680.15Show/hide
Query:  MFPAKFLALLVVFHLNSAVSATDDATMATPISCDNCTICQSACRPPPYE--PLPLSPPPP-PLAEPEPLPVPVSPANCPPTIVQCCQFL--PPPPPQATA
        MFPAK LAL+VVF+LN+AVSATDDA M TPISCDNCTICQS C PPP E  PLPLSPPPP P AEPEPLP PV+PANCPPTIVQCCQFL  PPPPPQATA
Subjt:  MFPAKFLALLVVFHLNSAVSATDDATMATPISCDNCTICQSACRPPPYE--PLPLSPPPP-PLAEPEPLPVPVSPANCPPTIVQCCQFL--PPPPPQATA

Query:  VNGNIYTPIYNESSSSYVKVGLASVLAPVFWVAAIF
        VNGN+YTPIYN SSSS+++VGL S LAPVF + AIF
Subjt:  VNGNIYTPIYNESSSSYVKVGLASVLAPVFWVAAIF

XP_008463043.1 PREDICTED: sperm mitochondrial-associated cysteine-rich protein-like [Cucumis melo]1.4e-4981.02Show/hide
Query:  MFPAKFLALLVVFHLNSAVSATDDATMATPISCDNCTICQSACRPPPYEPLPLSPPPP----PLAEPEPLPVPVSPANCPPTIVQCCQFL--PPPPPQAT
        MFPAK LAL+VVF+LNSAVSATDDA MATPISCDNCTICQS CRPP  EPLPL PPPP    P AEPEPLP+PV+PANCPPTIVQCCQFL  PPPPPQAT
Subjt:  MFPAKFLALLVVFHLNSAVSATDDATMATPISCDNCTICQSACRPPPYEPLPLSPPPP----PLAEPEPLPVPVSPANCPPTIVQCCQFL--PPPPPQAT

Query:  AVNGNIYTPIYNESSSSYVKVGLASVLAPVFWVAAIF
        A NGNIYTPIYNESSSS+++VGL S LAPVF + AIF
Subjt:  AVNGNIYTPIYNESSSSYVKVGLASVLAPVFWVAAIF

XP_011659730.1 leucine-rich repeat extensin-like protein 3 [Cucumis sativus]1.5e-4680.15Show/hide
Query:  MFPAKFLALLVVFHLNSAVSATDDATMATPISCDNCTICQSACRPPPYE--PLPLSPPPP-PLAEPEPLPVPVSPANCPPTIVQCCQFL--PPPPPQATA
        MFPAK LAL+VVF+LN+AVSATDDA M TPISCDNCTICQS C PPP E  PLPLSPPPP P AEPEPLP PV+PANCPPTIVQCCQFL  PPPPPQATA
Subjt:  MFPAKFLALLVVFHLNSAVSATDDATMATPISCDNCTICQSACRPPPYE--PLPLSPPPP-PLAEPEPLPVPVSPANCPPTIVQCCQFL--PPPPPQATA

Query:  VNGNIYTPIYNESSSSYVKVGLASVLAPVFWVAAIF
        VNGN+YTPIYN SSSS+++VGL S LAPVF + AIF
Subjt:  VNGNIYTPIYNESSSSYVKVGLASVLAPVFWVAAIF

TrEMBL top hitse value%identityAlignment
A0A0A0K536 Uncharacterized protein7.2e-4780.15Show/hide
Query:  MFPAKFLALLVVFHLNSAVSATDDATMATPISCDNCTICQSACRPPPYE--PLPLSPPPP-PLAEPEPLPVPVSPANCPPTIVQCCQFL--PPPPPQATA
        MFPAK LAL+VVF+LN+AVSATDDA M TPISCDNCTICQS C PPP E  PLPLSPPPP P AEPEPLP PV+PANCPPTIVQCCQFL  PPPPPQATA
Subjt:  MFPAKFLALLVVFHLNSAVSATDDATMATPISCDNCTICQSACRPPPYE--PLPLSPPPP-PLAEPEPLPVPVSPANCPPTIVQCCQFL--PPPPPQATA

Query:  VNGNIYTPIYNESSSSYVKVGLASVLAPVFWVAAIF
        VNGN+YTPIYN SSSS+++VGL S LAPVF + AIF
Subjt:  VNGNIYTPIYNESSSSYVKVGLASVLAPVFWVAAIF

A0A1S3CI95 sperm mitochondrial-associated cysteine-rich protein-like7.0e-5081.02Show/hide
Query:  MFPAKFLALLVVFHLNSAVSATDDATMATPISCDNCTICQSACRPPPYEPLPLSPPPP----PLAEPEPLPVPVSPANCPPTIVQCCQFL--PPPPPQAT
        MFPAK LAL+VVF+LNSAVSATDDA MATPISCDNCTICQS CRPP  EPLPL PPPP    P AEPEPLP+PV+PANCPPTIVQCCQFL  PPPPPQAT
Subjt:  MFPAKFLALLVVFHLNSAVSATDDATMATPISCDNCTICQSACRPPPYEPLPLSPPPP----PLAEPEPLPVPVSPANCPPTIVQCCQFL--PPPPPQAT

Query:  AVNGNIYTPIYNESSSSYVKVGLASVLAPVFWVAAIF
        A NGNIYTPIYNESSSS+++VGL S LAPVF + AIF
Subjt:  AVNGNIYTPIYNESSSSYVKVGLASVLAPVFWVAAIF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCCGGCCAAATTTCTGGCTCTGCTCGTCGTTTTCCACCTCAACTCCGCCGTCTCTGCCACCGACGACGCCACCATGGCCACACCCATTTCCTGCGACAACTGCAC
CATTTGTCAATCCGCCTGCCGCCCACCGCCGTACGAGCCACTGCCACTCTCTCCTCCGCCGCCGCCGTTAGCAGAGCCAGAGCCACTGCCGGTTCCTGTTTCTCCTGCGA
ACTGCCCTCCCACCATTGTCCAGTGCTGTCAGTTTCTTCCGCCGCCGCCGCCTCAAGCGACGGCGGTGAATGGTAATATATATACGCCGATTTATAATGAGTCGTCTTCT
TCGTATGTGAAAGTTGGGTTGGCCTCTGTTTTGGCCCCTGTTTTTTGGGTGGCCGCCATTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCCGGCCAAATTTCTGGCTCTGCTCGTCGTTTTCCACCTCAACTCCGCCGTCTCTGCCACCGACGACGCCACCATGGCCACACCCATTTCCTGCGACAACTGCAC
CATTTGTCAATCCGCCTGCCGCCCACCGCCGTACGAGCCACTGCCACTCTCTCCTCCGCCGCCGCCGTTAGCAGAGCCAGAGCCACTGCCGGTTCCTGTTTCTCCTGCGA
ACTGCCCTCCCACCATTGTCCAGTGCTGTCAGTTTCTTCCGCCGCCGCCGCCTCAAGCGACGGCGGTGAATGGTAATATATATACGCCGATTTATAATGAGTCGTCTTCT
TCGTATGTGAAAGTTGGGTTGGCCTCTGTTTTGGCCCCTGTTTTTTGGGTGGCCGCCATTTTCTGA
Protein sequenceShow/hide protein sequence
MFPAKFLALLVVFHLNSAVSATDDATMATPISCDNCTICQSACRPPPYEPLPLSPPPPPLAEPEPLPVPVSPANCPPTIVQCCQFLPPPPPQATAVNGNIYTPIYNESSS
SYVKVGLASVLAPVFWVAAIF