; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G018340 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G018340
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionmRNA decay activator protein ZFP36L2-like isoform X2
Genome locationchr02:24134558..24139844
RNA-Seq ExpressionLsi02G018340
SyntenyLsi02G018340
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000571 - Zinc finger, CCCH-type
IPR036855 - Zinc finger, CCCH-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK07952.1 tristetraprolin-like isoform X2 [Cucumis melo var. makuwa]1.6e-13476.83Show/hide
Query:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQI
        MED Q KRSS+TSIIKGLNAS+RP+NIQMDNHLVIGGTRHYHQETNCKSPTI D Y IMNHYASST GSNSFG RG G  LSPLSAIENLETP ++SPQI
Subjt:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQI

Query:  YGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSDKLNIL
        YGTP+KVDEEVIVMDGILI+SI G AKTVRSPLDSGSGGG   GKNQYR+DICRYWEDSGSCRFG+KCQFAHGKEDLRPGRLPVRTK K           
Subjt:  YGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSDKLNIL

Query:  QFNEAYGSKFRNNHLQTGIAATTT---QSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSLISTISII-----------DWSPEDDGIKIAVPETE
         F+E YGSKFRNNH  +GI+ATTT    SN VDTITKTE+SKREGL  TSS+  R   TNT P+LISTISII           DWSPEDDGIKI VP TE
Subjt:  QFNEAYGSKFRNNHLQTGIAATTT---QSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSLISTISII-----------DWSPEDDGIKIAVPETE

Query:  STKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQE
        STKREDV+QHIH VLYGSTTERTK RLPVF+QLCSE+LQ+E
Subjt:  STKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQE

XP_004148935.1 uncharacterized protein LOC101215865 [Cucumis sativus]3.9e-13680Show/hide
Query:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQI
        MED QGKRSSKTSIIKGLNAS+RP+NIQMDNHLVIGGTRHYHQETNCKSPTI D Y IMNHYASST GSNSFG RG G  LSPLSAIENLETP IRSPQI
Subjt:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQI

Query:  YGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSDKLNIL
        YGTP+KVDEEVIVMDGILI+SI G AKTVRSPLDSGSGGG   GKNQYR+DICRYWEDSG+CRFG+KCQFAHGKEDLRPGRLPVRTK K           
Subjt:  YGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSDKLNIL

Query:  QFNEAYGSKFRNNHLQTGIAATTT---QSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHI
         F+E YGSKFRNNH  TGIAATTT    SN VDTITKTE+SKR GL  TSS    H  TN  P+LISTISII+WSPEDDGIKIAVP TESTKREDV+QHI
Subjt:  QFNEAYGSKFRNNHLQTGIAATTT---QSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHI

Query:  HGVLYGSTTERTKTRLPVFTQLCSEKLQQE
        H VLYGSTTERTK RLPVF Q+CSE+LQ+E
Subjt:  HGVLYGSTTERTKTRLPVFTQLCSEKLQQE

XP_022154583.1 uncharacterized protein LOC111021811 [Momordica charantia]5.3e-11764.34Show/hide
Query:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYT-------------------------------------------
        ME  QGKRSSKTSIIKGLN +V PINIQMDNHLVIGGT HYHQETNCKSPT+ DRY+                                           
Subjt:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYT-------------------------------------------

Query:  --IMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRY
          IMNHYASST  S+SFG RG GS LSPLSAIENLETP  RSPQIYGTPVKVDEEVIVMDGILI+S+PGGAKT+RS  +S +GGG LSGKN YRTDICR 
Subjt:  --IMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRY

Query:  WEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSDKLNILQFNEAYG-SKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIRHM
        WEDSGSCR+GHKCQFAHGKE+LRP RLPV+ KPKV   SD      +   YG SKF ++H    +A TT+ S  +DTI  +E+S+ EG     + SIRHM
Subjt:  WEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSDKLNILQFNEAYG-SKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIRHM

Query:  NTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQE
          NTKPSLISTISI+DWSPEDDGIKI +P ++STKREDV+Q+IH VLYGST ERTK RLPVFTQLCSEKLQQ+
Subjt:  NTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQE

XP_023536031.1 uncharacterized protein LOC111797287 isoform X1 [Cucurbita pepo subsp. pepo]5.3e-10159.09Show/hide
Query:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRY--------------------------------------------
        MED QGKRSSK +IIKGLNA+VRPI IQMDNHLVIGGT HYHQETN K PTI DRY                                            
Subjt:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRY--------------------------------------------

Query:  -TIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRY
         +I+NH+ASST GS+SFG R  GS LSPLSAIENLET  +RSPQIYGTP+KV EEVIVMD ILI+S+ GGAKT++S LDSGSGGG    KNQYRTDICR 
Subjt:  -TIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRY

Query:  WEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSDKLNILQFNEAY---GSKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIR
        WEDSGSCRFGHKCQFAHGKE+LRP  LP++TKPK            F E Y   G K RNNH  TGIAA TTQSNS+D   KTE+S+R      S  SI 
Subjt:  WEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSDKLNILQFNEAY---GSKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIR

Query:  HMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQ
        ++NT             DWSPEDD I++ VPET+ST R DVDQHIH VLYGSTTERTK RL VF QLCS + ++
Subjt:  HMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQ

XP_038897010.1 uncharacterized protein LOC120085195 [Benincasa hispida]5.4e-14682.62Show/hide
Query:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQI
        MED QGKRS+KTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNC+SPTI DRYTIMNHYASST G NSFG RG GSPLSPLSAIENLETP +RSPQI
Subjt:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQI

Query:  YGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSDKLNIL
        YGTPVKVDEEVIVMDGILI+SIPGGAKT+RSPLDSGSGGG  S KNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRP R+PVRTKPK           
Subjt:  YGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSDKLNIL

Query:  QFNEAYGSKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGL-GTTSSASIRHMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHG
         F+E YG KFRN+H  TGIAA TT SN +DT  KTE+S+RE L  TTSS S+RHM  NTKPSLI TISIIDWSPEDDGIKI VP+TE+TKREDV+Q+IHG
Subjt:  QFNEAYGSKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGL-GTTSSASIRHMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHG

Query:  VLYGSTTERTKTRLPVFTQLCSEKLQQE
        VLYGSTTERTK RLPVFTQLCSEKLQQE
Subjt:  VLYGSTTERTKTRLPVFTQLCSEKLQQE

TrEMBL top hitse value%identityAlignment
A0A0A0K529 C3H1-type domain-containing protein2.5e-10477.94Show/hide
Query:  MNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWED
        MNHYASST GSNSFG RG G  LSPLSAIENLETP IRSPQIYGTP+KVDEEVIVMDGILI+SI G AKTVRSPLDSGSGGG   GKNQYR+DICRYWED
Subjt:  MNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWED

Query:  SGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSDKLNILQFNEAYGSKFRNNHLQTGIAATTT---QSNSVDTITKTEISKREGLGTTSSASIRHMN
        SG+CRFG+KCQFAHGKEDLRPGRLPVRTK K            F+E YGSKFRNNH  TGIAATTT    SN VDTITKTE+SKR GL  TSS    H  
Subjt:  SGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSDKLNILQFNEAYGSKFRNNHLQTGIAATTT---QSNSVDTITKTEISKREGLGTTSSASIRHMN

Query:  TNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQE
        TN  P+LISTISII+WSPEDDGIKIAVP TESTKREDV+QHIH VLYGSTTERTK RLPVF Q+CSE+LQ+E
Subjt:  TNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQE

A0A5D3C9H3 Tristetraprolin-like isoform X27.9e-13576.83Show/hide
Query:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQI
        MED Q KRSS+TSIIKGLNAS+RP+NIQMDNHLVIGGTRHYHQETNCKSPTI D Y IMNHYASST GSNSFG RG G  LSPLSAIENLETP ++SPQI
Subjt:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQI

Query:  YGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSDKLNIL
        YGTP+KVDEEVIVMDGILI+SI G AKTVRSPLDSGSGGG   GKNQYR+DICRYWEDSGSCRFG+KCQFAHGKEDLRPGRLPVRTK K           
Subjt:  YGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSDKLNIL

Query:  QFNEAYGSKFRNNHLQTGIAATTT---QSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSLISTISII-----------DWSPEDDGIKIAVPETE
         F+E YGSKFRNNH  +GI+ATTT    SN VDTITKTE+SKREGL  TSS+  R   TNT P+LISTISII           DWSPEDDGIKI VP TE
Subjt:  QFNEAYGSKFRNNHLQTGIAATTT---QSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSLISTISII-----------DWSPEDDGIKIAVPETE

Query:  STKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQE
        STKREDV+QHIH VLYGSTTERTK RLPVF+QLCSE+LQ+E
Subjt:  STKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQE

A0A6J1DKP7 uncharacterized protein LOC1110218112.6e-11764.34Show/hide
Query:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYT-------------------------------------------
        ME  QGKRSSKTSIIKGLN +V PINIQMDNHLVIGGT HYHQETNCKSPT+ DRY+                                           
Subjt:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYT-------------------------------------------

Query:  --IMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRY
          IMNHYASST  S+SFG RG GS LSPLSAIENLETP  RSPQIYGTPVKVDEEVIVMDGILI+S+PGGAKT+RS  +S +GGG LSGKN YRTDICR 
Subjt:  --IMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRY

Query:  WEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSDKLNILQFNEAYG-SKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIRHM
        WEDSGSCR+GHKCQFAHGKE+LRP RLPV+ KPKV   SD      +   YG SKF ++H    +A TT+ S  +DTI  +E+S+ EG     + SIRHM
Subjt:  WEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSDKLNILQFNEAYG-SKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIRHM

Query:  NTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQE
          NTKPSLISTISI+DWSPEDDGIKI +P ++STKREDV+Q+IH VLYGST ERTK RLPVFTQLCSEKLQQ+
Subjt:  NTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQE

A0A6J1ICU5 uncharacterized protein LOC111472626 isoform X12.2e-10058.56Show/hide
Query:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRY--------------------------------------------
        MED QGKRSSK SIIKGLN +VRPI IQMDNHLVIGGT HYHQETN K PTI DRY                                            
Subjt:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRY--------------------------------------------

Query:  -TIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRY
         +I+NH+ASST GS+SFG R  GS LSPLSA+ENLET  +RSPQIYGTP+KV EEVIVMD ILI+S+ GGAKT++S LDSGSGGG    KNQYRTDICR 
Subjt:  -TIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRY

Query:  WEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSDKLNILQFNEAY---GSKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIR
        WEDSGSCRFGHKCQFAHGKE+LRP  LPV+TKPK            F E Y   G K RNNH  TGIAA TTQSNS+    KTE+++R      S  SI 
Subjt:  WEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSDKLNILQFNEAY---GSKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIR

Query:  HMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQ
        ++NT             DWSP+DDGI++ VPET+ST R DVDQHI  VLYGSTTER K RLPVF QLCS +L++
Subjt:  HMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQ

A0A6J1IEX1 uncharacterized protein LOC111472616 isoform X11.7e-10058.56Show/hide
Query:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRY--------------------------------------------
        MED QGKRSSK SIIKGLN +VRPI IQMDNHLVIGGT HYHQETN K PTI DRY                                            
Subjt:  MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRY--------------------------------------------

Query:  -TIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRY
         +I+NH+ASST GS+SFG R  GS LSPLSA+ENLET  +RSPQIYGTP+KV EEVIVMD ILI+S+ GGAKT++S LDSGSGGG    KNQYRTDICR 
Subjt:  -TIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRY

Query:  WEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSDKLNILQFNEAY---GSKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIR
        WEDSGSCRFGHKCQFAHGKE+LRP  LPV+TKPK            F E Y   G K RNNH  TGIAA TTQSNS+    KTE+++R      S  SI 
Subjt:  WEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSDKLNILQFNEAY---GSKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIR

Query:  HMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQ
        ++NT             DWSP+DDGI++ VPET+ST R DVDQHI  VLYGSTTER K RLPVF QLCS +L++
Subjt:  HMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQ

SwissProt top hitse value%identityAlignment
P23949 mRNA decay activator protein ZFP36L28.8e-0626.81Show/hide
Query:  SPTIFDRYTIMNHYASS----TPGSNS----FGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGG
        +P    R++  N +A +    +PGS S      P G GS   P          +++ P        V +E    D     +       +        G G
Subjt:  SPTIFDRYTIMNHYASS----TPGSNS----FGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGG

Query:  LLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLR
              +Y+T++CR +E+SG+C++G KCQFAHG  +LR
Subjt:  LLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLR

P47974 mRNA decay activator protein ZFP36L21.4e-0651.22Show/hide
Query:  GGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLR
        GGG      +Y+T++CR +E+SG+C++G KCQFAHG  +LR
Subjt:  GGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLR

P47979 Zinc finger protein zfs12.3e-0649.09Show/hide
Query:  PLDSGSGGGLL-SGKNQ-YRTDICRYWEDSGSCRFGHKCQFAHGKEDLR-PGRLP
        P  SGS  G+  +GK   Y+T+ C+ W+ SG+CR+G KCQFAHG ++L+ P R P
Subjt:  PLDSGSGGGLL-SGKNQ-YRTDICRYWEDSGSCRFGHKCQFAHGKEDLR-PGRLP

Q07352 mRNA decay activator protein ZFP36L15.1e-0644.68Show/hide
Query:  PLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLR
        P     GGG ++  ++Y+T++CR +E++G+C++G KCQFAHG  +LR
Subjt:  PLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLR

Q5ISE2 mRNA decay activator protein ZFP36L33.6e-0752.38Show/hide
Query:  SGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLR
        SG   L+   +Y+T++CR +E+SG C++GHKCQFAHG  +LR
Subjt:  SGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLR

Arabidopsis top hitse value%identityAlignment
AT1G01350.1 Zinc finger (CCCH-type/C3HC4-type RING finger) family protein2.9e-0432.79Show/hide
Query:  KTVRSPLDSGSGGGL-------LSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPG
        +T+ S    GS G L       +S +  Y+ DIC+ ++++G C +G  C+F H + D +PG
Subjt:  KTVRSPLDSGSGGGL-------LSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPG

AT1G32360.1 Zinc finger (CCCH-type) family protein4.5e-0547.73Show/hide
Query:  SGSGGGL-LSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDL
        SGSG G+ +   + ++T IC  WE +G C FG KC FAHG  +L
Subjt:  SGSGGGL-LSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDL

AT1G66810.1 Zinc finger C-x8-C-x5-C-x3-H type family protein2.0e-0548.39Show/hide
Query:  RTDICRYWEDSGSCRFGHKCQFAHGKEDLRP
        +T++C  W+++G+C +G  CQFAHG ++LRP
Subjt:  RTDICRYWEDSGSCRFGHKCQFAHGKEDLRP

AT1G68200.1 Zinc finger C-x8-C-x5-C-x3-H type family protein2.6e-0548.39Show/hide
Query:  RTDICRYWEDSGSCRFGHKCQFAHGKEDLRP
        +T++C  W+++G+C +G  CQFAHG ++LRP
Subjt:  RTDICRYWEDSGSCRFGHKCQFAHGKEDLRP

AT1G68200.2 Zinc finger C-x8-C-x5-C-x3-H type family protein2.6e-0548.39Show/hide
Query:  RTDICRYWEDSGSCRFGHKCQFAHGKEDLRP
        +T++C  W+++G+C +G  CQFAHG ++LRP
Subjt:  RTDICRYWEDSGSCRFGHKCQFAHGKEDLRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATCATCAAGGAAAGAGGAGCTCCAAAACATCCATTATCAAAGGCCTAAACGCTTCGGTTCGGCCGATCAACATTCAAATGGACAATCACTTGGTAATTGGGGG
AACTAGACACTATCACCAGGAAACAAACTGTAAAAGTCCGACGATCTTCGATCGTTACACCATTATGAATCACTATGCTAGCAGCACTCCTGGAAGCAATAGCTTCGGTC
CTCGGGGAACAGGATCGCCATTGTCACCACTTTCGGCTATCGAGAATTTGGAAACACCACGTATAAGGTCTCCACAAATTTATGGAACTCCAGTGAAGGTTGATGAAGAA
GTGATAGTAATGGATGGGATTTTGATCAATTCGATTCCTGGTGGAGCGAAGACAGTGAGGTCTCCTTTAGATTCTGGAAGTGGTGGAGGTTTGTTGTCAGGCAAAAATCA
ATACAGAACAGACATTTGCCGCTACTGGGAGGATTCTGGAAGCTGCCGCTTCGGCCACAAATGCCAGTTTGCACATGGAAAGGAGGACCTTCGGCCAGGTCGTTTACCGG
TTAGAACCAAGCCTAAGGTACCATTGACATCTGATAAATTAAATATACTGCAGTTCAACGAAGCGTATGGTTCCAAGTTTCGCAACAATCATTTACAAACAGGAATAGCT
GCAACAACAACACAATCAAACTCAGTAGATACAATCACCAAAACTGAAATTAGCAAAAGAGAGGGTCTTGGTACAACATCCTCAGCTTCAATACGCCACATGAACACGAA
CACGAAGCCAAGCCTTATTTCCACCATTTCCATCATTGATTGGTCACCTGAAGATGATGGCATTAAAATTGCTGTCCCGGAAACAGAGTCGACAAAAAGAGAAGATGTAG
ACCAACACATCCATGGAGTTCTTTATGGTTCCACCACTGAGAGGACCAAAACAAGATTACCAGTTTTCACTCAACTCTGCTCTGAAAAACTCCAACAAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATTATATGTAAGTTCATTTGGTTTTGAGTTATGGTTGTTCAGTAATGTTGTTCCTACTCCACTCCCAAACTCCGAATTCATGAATTCATGCTCATTTTCCGTCCAAGGAA
GAAATGTAACTCTTCATTTCTCTCTCTCAAATCGGAGTCTCTCAACGGCGGATTGAATCGTTGGCTCCATACAATCTGTAGGTTCCAAGTGTTGAAGAACGCGTTGTCGA
CGTCGTTACCTCCATGATCAACAATCAGTGTTGCAATTAAGAGCTTTTCGTCCGTCTTTCTTAGACTATCGCTTCAAGCCTTCTCTTACACCTCTATCTCAGTCCAGGCT
CTATCAAAACAAAAATGTCGTTCCATATCGGCTTTTGGCTTCACTCATTTCATCTTCGTGAGGTCTAGTGTCTCTGGACTATGGTTTGTTTGCTCCTCAGAAGGTAGAGG
AGAAGCTGAAAGACTAGGAAAGGAGAAAACATTTGCATTCTACATCGAAGCTCAAGGTTCTTTTCCTGAATCATGGAAGATCATCAAGGAAAGAGGAGCTCCAAAACATC
CATTATCAAAGGCCTAAACGCTTCGGTTCGGCCGATCAACATTCAAATGGACAATCACTTGGTAATTGGGGGAACTAGACACTATCACCAGGAAACAAACTGTAAAAGTC
CGACGATCTTCGATCGTTACACCATTATGAATCACTATGCTAGCAGCACTCCTGGAAGCAATAGCTTCGGTCCTCGGGGAACAGGATCGCCATTGTCACCACTTTCGGCT
ATCGAGAATTTGGAAACACCACGTATAAGGTCTCCACAAATTTATGGAACTCCAGTGAAGGTTGATGAAGAAGTGATAGTAATGGATGGGATTTTGATCAATTCGATTCC
TGGTGGAGCGAAGACAGTGAGGTCTCCTTTAGATTCTGGAAGTGGTGGAGGTTTGTTGTCAGGCAAAAATCAATACAGAACAGACATTTGCCGCTACTGGGAGGATTCTG
GAAGCTGCCGCTTCGGCCACAAATGCCAGTTTGCACATGGAAAGGAGGACCTTCGGCCAGGTCGTTTACCGGTTAGAACCAAGCCTAAGGTACCATTGACATCTGATAAA
TTAAATATACTGCAGTTCAACGAAGCGTATGGTTCCAAGTTTCGCAACAATCATTTACAAACAGGAATAGCTGCAACAACAACACAATCAAACTCAGTAGATACAATCAC
CAAAACTGAAATTAGCAAAAGAGAGGGTCTTGGTACAACATCCTCAGCTTCAATACGCCACATGAACACGAACACGAAGCCAAGCCTTATTTCCACCATTTCCATCATTG
ATTGGTCACCTGAAGATGATGGCATTAAAATTGCTGTCCCGGAAACAGAGTCGACAAAAAGAGAAGATGTAGACCAACACATCCATGGAGTTCTTTATGGTTCCACCACT
GAGAGGACCAAAACAAGATTACCAGTTTTCACTCAACTCTGCTCTGAAAAACTCCAACAAGAATAGGTACGCCAAGCTTTTTCCCATCATCAAATTGCAAATGATTCTCT
TAAAATCTACTCTAATTGGTTACACCATTTTTTTTTAAACACTCAGTCAGCTTTGAAATAGGAGCTTTCATGGGTCATATTAGTACTTACTCATCAGTCATAAAGAAGGA
TTATGTTAGAAGAAATTAAGTAATAAGGAAAAAAGTTTTTCATTACTTTGTTGTAGCTGTATGTACAATGAGCAAAACAATGATCCAAGTTGTACATCACTATATCGTTT
GCATGAGGCTCTGATGATATTGATGGTAAATTCTAATTCTGAAAAAAAAATGATGAACAGAAATATTATAGATTTATATG
Protein sequenceShow/hide protein sequence
MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEE
VIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSDKLNILQFNEAYGSKFRNNHLQTGIA
ATTTQSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQE