; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G018380 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G018380
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:24154195..24158444
RNA-Seq ExpressionLsi02G018380
SyntenyLsi02G018380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592094.1 hypothetical protein SDJN03_14440, partial [Cucurbita argyrosperma subsp. sororia]2.8e-3895.4Show/hide
Query:  VKEETTIYLGPHGAPPSHSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK
        VKEE TIYLGPHGAPPS SKQDLNPANRK RLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM KGSSRDWLDPHCHEAQFEK
Subjt:  VKEETTIYLGPHGAPPSHSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK

XP_004150791.2 uncharacterized protein LOC101216518 [Cucumis sativus]3.3e-3996.55Show/hide
Query:  VKEETTIYLGPHGAPPSHSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK
        VKEETTIYLGPHGAPPS SKQDLNP NRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEA+FEK
Subjt:  VKEETTIYLGPHGAPPSHSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK

XP_022936022.1 uncharacterized protein LOC111442743 [Cucurbita moschata]2.8e-3895.4Show/hide
Query:  VKEETTIYLGPHGAPPSHSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK
        VKEE TIYLGPHGAPPS SKQDLNPANRK RLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM KGSSRDWLDPHCHEAQFEK
Subjt:  VKEETTIYLGPHGAPPSHSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK

XP_022975858.1 uncharacterized protein LOC111476432 [Cucurbita maxima]2.8e-3895.4Show/hide
Query:  VKEETTIYLGPHGAPPSHSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK
        VKEE TIYLGPHGAPPS SKQDLNPANRK RLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM KGSSRDWLDPHCHEAQFEK
Subjt:  VKEETTIYLGPHGAPPSHSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK

XP_038898121.1 uncharacterized protein LOC120085905 [Benincasa hispida]1.5e-3997.7Show/hide
Query:  VKEETTIYLGPHGAPPSHSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK
        VKEETTIYLGPHGAPPS SKQDLNP NRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK
Subjt:  VKEETTIYLGPHGAPPSHSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK

TrEMBL top hitse value%identityAlignment
A0A0A0K8B7 Uncharacterized protein1.6e-3996.55Show/hide
Query:  VKEETTIYLGPHGAPPSHSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK
        VKEETTIYLGPHGAPPS SKQDLNP NRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEA+FEK
Subjt:  VKEETTIYLGPHGAPPSHSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK

A0A5D3CCA9 Uncharacterized protein7.5e-3791.95Show/hide
Query:  VKEETTIYLGPHGAPPSHSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK
        VKEETTIYLGPHGAPPS SKQDLNP NRKQRLK KLKEADRRTT GRENKLENLRELVG GKSSTNM KGSSRDWLDPHCHEA+FEK
Subjt:  VKEETTIYLGPHGAPPSHSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK

A0A6J1CE06 uncharacterized protein LOC1110103853.0e-3896.51Show/hide
Query:  KEETTIYLGPHGAPPSHSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK
        KEETTIYLGPHGAPPS SKQDLN  NRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK
Subjt:  KEETTIYLGPHGAPPSHSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK

A0A6J1F787 uncharacterized protein LOC1114427431.4e-3895.4Show/hide
Query:  VKEETTIYLGPHGAPPSHSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK
        VKEE TIYLGPHGAPPS SKQDLNPANRK RLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM KGSSRDWLDPHCHEAQFEK
Subjt:  VKEETTIYLGPHGAPPSHSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK

A0A6J1IKG2 uncharacterized protein LOC1114764321.4e-3895.4Show/hide
Query:  VKEETTIYLGPHGAPPSHSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK
        VKEE TIYLGPHGAPPS SKQDLNPANRK RLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM KGSSRDWLDPHCHEAQFEK
Subjt:  VKEETTIYLGPHGAPPSHSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G55640.1 unknown protein1.1e-2464.84Show/hide
Query:  KEETTIYLGPHGAPPSHSKQ-DLNPANRKQRLKQKLKEADRRTT-TGRENKLENLRELVGGG---KSSTNMAKGSSRDWLDPHCHEAQFEK
        K E  IYLGPHGAPPS  +    N ++RKQR KQ LKEAD++ + +GRENK+ NLRELVGGG   +  TNM KG SRDWLDPHCHE+QFEK
Subjt:  KEETTIYLGPHGAPPSHSKQ-DLNPANRKQRLKQKLKEADRRTT-TGRENKLENLRELVGGG---KSSTNMAKGSSRDWLDPHCHEAQFEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGTCAGTATTCAATGGACCCGTCATCAGTGCACAAAGCTCCTCCAGTTGAAGAAGATGAGTGGGGTTAAAGAAGAGACGACGATCTATCTTGGCCCACATGGCGC
ACCACCATCACATTCAAAACAAGATTTGAATCCTGCCAATCGTAAGCAACGGTTAAAGCAGAAATTGAAGGAAGCAGATCGGAGGACCACGACGGGACGAGAGAATAAGT
TGGAGAATTTAAGAGAGCTTGTAGGTGGTGGAAAATCAAGCACCAATATGGCAAAGGGTTCTTCTAGGGACTGGCTTGACCCACATTGCCATGAGGCTCAGTTCGAGAAG
TAA
mRNA sequenceShow/hide mRNA sequence
AAGATTTTTGTGACGTACGCCAAATGTTAGTTTATTATTTCAACATTTGCCCAACTAAATTTAAGTCATCCCTATAAAAATATCAAATTTTGAGATATTTAAAAAGAAAA
ACAAAAGTGTGAGAAGCTTGAAAAAAGCGCCATTTTGATTCTCTGCCAGGTACCTTGGGGATATAATACTTTTTTTTTTTTTTTTTTGGTAAGGGTTTAGGGGTATAATA
CAATAGAAACTTTGTATTGTCATTGTTAATCGAAATTGCGATTCAAATTCAACTTCGCGTTTTCCTTGATTATCGGCCAGAAGGGTTTTTTTTTCCCTTTAAAATTTATT
CTCTCTGTTCTTTTTCCTTTTTTCTTTTCTCCTTTAAATTTGAAGTTTCTTCGGGAATCGTGTTGGGCGTGGTGGTGTTTAATCGTTTTTTCCTCCTTTCTGGGCTTTAG
CGCCCTGTGGCCACTGAAATCGATGATCGTCAGTATTCAATGGACCCGTCATCAGTGCACAAAGCTCCTCCAGTTGAAGAAGATGAGTGGGGTTAAAGAAGAGACGACGA
TCTATCTTGGCCCACATGGCGCACCACCATCACATTCAAAACAAGATTTGAATCCTGCCAATCGTAAGCAACGGTTAAAGCAGAAATTGAAGGAAGCAGATCGGAGGACC
ACGACGGGACGAGAGAATAAGTTGGAGAATTTAAGAGAGCTTGTAGGTGGTGGAAAATCAAGCACCAATATGGCAAAGGGTTCTTCTAGGGACTGGCTTGACCCACATTG
CCATGAGGCTCAGTTCGAGAAGTAATGTCCACAGAGATCAAAGTAATTTATAAGACAACTTAAGAAAATTAGCACAGTTTTCCAGATAAAGATCTGATCGGTCGTTTTGT
CAGTCTATTTACTGTCCTTTCGAGACAAATATTACCTTCTCTATATTTTTGGAAACTTAATGCATGGAGTTTATAACTATAAATAAGTGTTGTATTGGAACTTTGATGGT
ATAAATGAAGCAGTTGCTTACAAAGCAGGAGATTTGGTGAATATTTGGTGAAGCTAATCATTGAATGTTTTTAATTTTCCTAACAATGCCTCAAATCTTACAAAATTGAA
TCACTTGATGAATTACTCTAATCCAACATTGATG
Protein sequenceShow/hide protein sequence
MIVSIQWTRHQCTKLLQLKKMSGVKEETTIYLGPHGAPPSHSKQDLNPANRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAQFEK