; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G018900 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G018900
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCCR4-NOT transcription complex subunit 9-like
Genome locationchr02:24769138..24775830
RNA-Seq ExpressionLsi02G018900
SyntenyLsi02G018900
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0000932 - P-body (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
InterPro domainsIPR011989 - Armadillo-like helical


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139793.1 CCR4-NOT transcription complex subunit 9 [Cucumis sativus]1.5e-15289.66Show/hide
Query:  MANLPQSLSMNAAFGGPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
        MANLPQSLSMNAAFGGPGPSIPGA+GAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
Subjt:  MANLPQSLSMNAAFGGPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP

Query:  AQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATF
        AQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK                                VATF
Subjt:  AQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATF

Query:  IVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
        IVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
Subjt:  IVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG

Query:  MSRVPALQAGAGFDHMMVN
        MSRVPALQAGAGFDHMMVN
Subjt:  MSRVPALQAGAGFDHMMVN

XP_022139599.1 CCR4-NOT transcription complex subunit 9 isoform X2 [Momordica charantia]3.3e-14786.52Show/hide
Query:  MANLPQSLSMNAAFGGPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
        M+NLPQS+SMNA FGGPGPSIP ASGAPP KERKMA SEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
Subjt:  MANLPQSLSMNAAFGGPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP

Query:  AQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATF
        AQSNRVCNALALLQCVASH DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK                                VATF
Subjt:  AQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATF

Query:  IVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
        IVQKILLDDVGLDYICTTAERFFAVGRVLG+MV ALAEQPSSRLLKHIIRCYLRLSDNPKACDALR+CLPDMLRD TFNSCLREDPTTRRWLQQLLHNVG
Subjt:  IVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG

Query:  MSRVPALQAGAGFDHMMVN
        MSRVPALQAGAGFDHMMVN
Subjt:  MSRVPALQAGAGFDHMMVN

XP_022940835.1 CCR4-NOT transcription complex subunit 9-like [Cucurbita moschata]1.1e-14787.23Show/hide
Query:  MANLPQSLSMNAAFG--GPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
        M+NLPQSLSM+AAFG  GPGPSIP ASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
Subjt:  MANLPQSLSMNAAFG--GPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL

Query:  TPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VA
        TPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK                                VA
Subjt:  TPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VA

Query:  TFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHN
        TFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAAL+EQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFN CLR+D TTRRWLQQLLHN
Subjt:  TFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHN

Query:  VGMSRVPALQAGAGFDHMMVN
        VGMSRVPALQAGAGFDHMMVN
Subjt:  VGMSRVPALQAGAGFDHMMVN

XP_022981552.1 CCR4-NOT transcription complex subunit 9-like [Cucurbita maxima]1.9e-14786.69Show/hide
Query:  MANLPQSLSMNAAFG----GPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPP
        M+NLPQSLSM+AAFG    GPGPSIP ASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPP
Subjt:  MANLPQSLSMNAAFG----GPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPP

Query:  NLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------
        NLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK                                
Subjt:  NLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------

Query:  VATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLL
        VATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAAL+EQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFN CLR+D TTRRWLQQLL
Subjt:  VATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLL

Query:  HNVGMSRVPALQAGAGFDHMMVN
        HNVGMSRVPALQAGAGFDHMMVN
Subjt:  HNVGMSRVPALQAGAGFDHMMVN

XP_038898425.1 CCR4-NOT transcription complex subunit 9 isoform X1 [Benincasa hispida]2.0e-15289.66Show/hide
Query:  MANLPQSLSMNAAFGGPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
        MANLPQSLSMNAAFGGPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
Subjt:  MANLPQSLSMNAAFGGPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP

Query:  AQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATF
        AQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK                                VATF
Subjt:  AQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATF

Query:  IVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
        IVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
Subjt:  IVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG

Query:  MSRVPALQAGAGFDHMMVN
        MSRVP LQAGAGFDHMMVN
Subjt:  MSRVPALQAGAGFDHMMVN

TrEMBL top hitse value%identityAlignment
A0A0A0K791 Uncharacterized protein7.4e-15389.66Show/hide
Query:  MANLPQSLSMNAAFGGPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
        MANLPQSLSMNAAFGGPGPSIPGA+GAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
Subjt:  MANLPQSLSMNAAFGGPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP

Query:  AQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATF
        AQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK                                VATF
Subjt:  AQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATF

Query:  IVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
        IVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
Subjt:  IVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG

Query:  MSRVPALQAGAGFDHMMVN
        MSRVPALQAGAGFDHMMVN
Subjt:  MSRVPALQAGAGFDHMMVN

A0A1S3BI21 cell differentiation protein RCD1 homolog7.4e-15389.66Show/hide
Query:  MANLPQSLSMNAAFGGPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
        MANLPQSLSMNAAFGGPGPSIPGA+GAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
Subjt:  MANLPQSLSMNAAFGGPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP

Query:  AQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATF
        AQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK                                VATF
Subjt:  AQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATF

Query:  IVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
        IVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
Subjt:  IVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG

Query:  MSRVPALQAGAGFDHMMVN
        MSRVPALQAGAGFDHMMVN
Subjt:  MSRVPALQAGAGFDHMMVN

A0A5D3DHI4 Cell differentiation protein RCD1-like protein isoform X27.4e-15389.66Show/hide
Query:  MANLPQSLSMNAAFGGPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
        MANLPQSLSMNAAFGGPGPSIPGA+GAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
Subjt:  MANLPQSLSMNAAFGGPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP

Query:  AQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATF
        AQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK                                VATF
Subjt:  AQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATF

Query:  IVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
        IVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
Subjt:  IVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG

Query:  MSRVPALQAGAGFDHMMVN
        MSRVPALQAGAGFDHMMVN
Subjt:  MSRVPALQAGAGFDHMMVN

A0A6J1FRT6 CCR4-NOT transcription complex subunit 9-like5.5e-14887.23Show/hide
Query:  MANLPQSLSMNAAFG--GPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
        M+NLPQSLSM+AAFG  GPGPSIP ASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
Subjt:  MANLPQSLSMNAAFG--GPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL

Query:  TPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VA
        TPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK                                VA
Subjt:  TPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VA

Query:  TFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHN
        TFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAAL+EQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFN CLR+D TTRRWLQQLLHN
Subjt:  TFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHN

Query:  VGMSRVPALQAGAGFDHMMVN
        VGMSRVPALQAGAGFDHMMVN
Subjt:  VGMSRVPALQAGAGFDHMMVN

A0A6J1IU99 CCR4-NOT transcription complex subunit 9-like9.3e-14886.69Show/hide
Query:  MANLPQSLSMNAAFG----GPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPP
        M+NLPQSLSM+AAFG    GPGPSIP ASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPP
Subjt:  MANLPQSLSMNAAFG----GPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPP

Query:  NLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------
        NLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK                                
Subjt:  NLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------

Query:  VATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLL
        VATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAAL+EQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFN CLR+D TTRRWLQQLL
Subjt:  VATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLL

Query:  HNVGMSRVPALQAGAGFDHMMVN
        HNVGMSRVPALQAGAGFDHMMVN
Subjt:  HNVGMSRVPALQAGAGFDHMMVN

SwissProt top hitse value%identityAlignment
A7MB47 CCR4-NOT transcription complex subunit 91.4e-8461.89Show/hide
Query:  QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFL
        Q + +LS+P+ RENALLELSKKRE   DLAP+LW+SFGTIAALLQEIV+IYP ++PP LT  QSNRVCNALALLQCVASH +TR  FL AHIPL+LYPFL
Subjt:  QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFL

Query:  NTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQ
        +T SK+RPFEYLRLTSLGVIGALVK                                VATFI+QKILLDD GL YIC T ERF  V  +LG MV  L+++
Subjt:  NTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQ

Query:  PSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVGMSRV
        PS+RLLKH++RCYLRLSDNP+A +ALR CLPD L+D TF   L++D TT+RWL QL+ N+   +V
Subjt:  PSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVGMSRV

Q4R347 CCR4-NOT transcription complex subunit 91.4e-8461.89Show/hide
Query:  QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFL
        Q + +LS+P+ RENALLELSKKRE   DLAP+LW+SFGTIAALLQEIV+IYP ++PP LT  QSNRVCNALALLQCVASH +TR  FL AHIPL+LYPFL
Subjt:  QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFL

Query:  NTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQ
        +T SK+RPFEYLRLTSLGVIGALVK                                VATFI+QKILLDD GL YIC T ERF  V  +LG MV  L+++
Subjt:  NTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQ

Query:  PSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVGMSRV
        PS+RLLKH++RCYLRLSDNP+A +ALR CLPD L+D TF   L++D TT+RWL QL+ N+   +V
Subjt:  PSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVGMSRV

Q6IP65 CCR4-NOT transcription complex subunit 94.9e-8562.26Show/hide
Query:  QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFL
        Q + +LS+PD RENALLELSKKRE   DLAP+LW+SFGTIAALLQEIV+IYP ++PP LT  QSNRVCNALALLQCVASH +TR  FL AHIPL+LYPFL
Subjt:  QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFL

Query:  NTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQ
        +T SK+RPFEYLRLTSLGVIGALVK                                VATFI+QKILLDD GL YIC T ERF  V  +LG MV  L+++
Subjt:  NTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQ

Query:  PSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVGMSRV
        PS+RLLKH++RCYLRLSDNP+A +ALR CLPD L+D TF   L++D TT+RWL QL+ N+   +V
Subjt:  PSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVGMSRV

Q6P819 CCR4-NOT transcription complex subunit 94.9e-8562.26Show/hide
Query:  QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFL
        Q + +LS+PD RENALLELSKKRE   DLAP+LW+SFGTIAALLQEIV+IYP ++PP LT  QSNRVCNALALLQCVASH +TR  FL AHIPL+LYPFL
Subjt:  QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFL

Query:  NTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQ
        +T SK+RPFEYLRLTSLGVIGALVK                                VATFI+QKILLDD GL YIC T ERF  V  +LG MV  L+++
Subjt:  NTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQ

Query:  PSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVGMSRV
        PS+RLLKH++RCYLRLSDNP+A +ALR CLPD L+D TF   L++D TT+RWL QL+ N+   +V
Subjt:  PSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVGMSRV

Q92600 CCR4-NOT transcription complex subunit 91.4e-8461.89Show/hide
Query:  QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFL
        Q + +LS+P+ RENALLELSKKRE   DLAP+LW+SFGTIAALLQEIV+IYP ++PP LT  QSNRVCNALALLQCVASH +TR  FL AHIPL+LYPFL
Subjt:  QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFL

Query:  NTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQ
        +T SK+RPFEYLRLTSLGVIGALVK                                VATFI+QKILLDD GL YIC T ERF  V  +LG MV  L+++
Subjt:  NTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQ

Query:  PSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVGMSRV
        PS+RLLKH++RCYLRLSDNP+A +ALR CLPD L+D TF   L++D TT+RWL QL+ N+   +V
Subjt:  PSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVGMSRV

Arabidopsis top hitse value%identityAlignment
AT2G32550.1 Cell differentiation, Rcd1-like protein1.3e-2430.72Show/hide
Query:  MANLPQSLSMN-AAFGGPGPS-IPGASGAPPNKERKMASSE-----QLVLDLSNPD--LRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYP
        M NLP SL  + +      PS    +S APP +   +A        Q V D+  P   + + AL  L+  R  F+ L  LLW S  T+  +LQE+   Y 
Subjt:  MANLPQSLSMN-AAFGGPGPS-IPGASGAPPNKERKMASSE-----QLVLDLSNPD--LRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYP

Query:  VLS--------PPNLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALV--------------------
         L+        P  L P    RV N   L Q +A H DT   FL A +P Y YP ++T    +  E +RL +LGVI  ++                    
Subjt:  VLS--------PPNLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALV--------------------

Query:  -------------KVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE--QPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNS
                     KVA +I+ KI+  D GL Y C  A+RF+ +  +L  ++  L+   +P S L   +  CY++LS N +A + +R   P +L D TF+ 
Subjt:  -------------KVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE--QPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNS

Query:  CLREDPTTRRWLQQLLHNV
           EDP       QLL N+
Subjt:  CLREDPTTRRWLQQLLHNV

AT3G20800.1 Cell differentiation, Rcd1-like protein3.0e-13076.03Show/hide
Query:  MANLPQSLSMNAAFGGPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
        MANLP SLSM   FGGP  S    +GAP NK+R +AS+EQLVLDLSNP+LRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIY VL+PPNLTP
Subjt:  MANLPQSLSMNAAFGGPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP

Query:  AQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATF
        AQSNRVCN+LALLQCVASHSDTRMLFL AHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK                                VATF
Subjt:  AQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATF

Query:  IVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
        IVQKILLDDVG+DYICTTAERFFAVGRVLGNMV +L EQPS RLLKHIIRCYLRLSDNP+AC AL SCLPD LRD +F++CLREDPT RRWLQQL+HNVG
Subjt:  IVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG

Query:  MSRVPALQAGAGFDHMM
        + RVP  Q G GF+HM+
Subjt:  MSRVPALQAGAGFDHMM

AT5G12980.1 Cell differentiation, Rcd1-like protein1.1e-11166.77Show/hide
Query:  MANLPQSLSMNAAFGGPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
        MANLP  LSM +     G S P +S    N +RK++S+EQL+LDLSNP+LRENAL ELSKKRE+FQDLAPLLW+S GTI ALLQEI+++YP LSPP +TP
Subjt:  MANLPQSLSMNAAFGGPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP

Query:  AQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATF
        AQSNRVCNALALLQCVASH+DTRMLFL AH+PLYLY FLNT+SKSRPFEYLRLTSLGVIGALVK                                VATF
Subjt:  AQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK--------------------------------VATF

Query:  IVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
        IVQK+LLDDVGL+Y+CTTAERFFA+GRVLGNMV +LAE PS+RLLKHIIRCYLRL+DNP+ACDAL SCLPD+LRDATF+ CL +DP   +WLQQLLHNV 
Subjt:  IVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG

Query:  MSRVPALQAGAGFDHMMVN
        +      +A  G  HM VN
Subjt:  MSRVPALQAGAGFDHMMVN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAATCTCCCCCAATCGCTCTCCATGAATGCTGCGTTTGGAGGTCCCGGTCCGTCCATCCCCGGTGCCTCCGGAGCTCCACCGAACAAGGAGCGAAAAATGGCTTC
TTCGGAGCAGTTGGTGCTCGACCTCAGCAATCCGGATCTCCGGGAGAACGCTCTCCTTGAACTGTCGAAGAAGAGGGAACTGTTTCAAGATTTGGCCCCATTGTTGTGGA
ATTCTTTTGGAACCATTGCTGCCTTATTGCAAGAGATTGTATCGATATATCCCGTTCTTTCACCCCCAAATCTTACACCTGCGCAGTCAAATAGAGTTTGCAATGCACTT
GCTCTTCTTCAGTGTGTAGCCTCTCATTCAGATACACGGATGTTGTTTCTCAATGCTCACATACCGTTGTATTTGTATCCTTTTCTTAACACAACTAGCAAGTCAAGGCC
TTTTGAGTACTTGCGCCTTACTAGCTTAGGTGTCATTGGTGCGTTGGTGAAGGTTGCAACATTTATCGTGCAGAAAATTTTGCTGGATGATGTAGGGTTGGATTATATTT
GTACTACAGCTGAGCGATTTTTTGCTGTCGGTCGGGTTCTGGGGAATATGGTAGCAGCTCTTGCTGAACAGCCCTCCTCTCGGCTATTGAAACACATAATTCGATGTTAT
CTTCGACTGTCTGATAACCCAAAGGCTTGCGACGCATTGAGGAGCTGTCTTCCAGATATGTTGAGGGATGCTACTTTCAATAGCTGCCTTCGGGAGGATCCAACCACTAG
GAGGTGGCTGCAACAGTTGCTACACAATGTAGGAATGAGTAGGGTTCCAGCACTTCAGGCAGGGGCTGGATTTGATCACATGATGGTGAACTAA
mRNA sequenceShow/hide mRNA sequence
GGTCGTCTTTGAAAGAACTAAAAAAAAAAAAGAAAAGAAAAAACTTCCATACTACCCTTCGCCGGCGTGAAATCGGAGGAGTATTGTAGAGGCTCGAAGGTTCTTGACCG
TCGAAAATGGCGAATCTCCCCCAATCGCTCTCCATGAATGCTGCGTTTGGAGGTCCCGGTCCGTCCATCCCCGGTGCCTCCGGAGCTCCACCGAACAAGGAGCGAAAAAT
GGCTTCTTCGGAGCAGTTGGTGCTCGACCTCAGCAATCCGGATCTCCGGGAGAACGCTCTCCTTGAACTGTCGAAGAAGAGGGAACTGTTTCAAGATTTGGCCCCATTGT
TGTGGAATTCTTTTGGAACCATTGCTGCCTTATTGCAAGAGATTGTATCGATATATCCCGTTCTTTCACCCCCAAATCTTACACCTGCGCAGTCAAATAGAGTTTGCAAT
GCACTTGCTCTTCTTCAGTGTGTAGCCTCTCATTCAGATACACGGATGTTGTTTCTCAATGCTCACATACCGTTGTATTTGTATCCTTTTCTTAACACAACTAGCAAGTC
AAGGCCTTTTGAGTACTTGCGCCTTACTAGCTTAGGTGTCATTGGTGCGTTGGTGAAGGTTGCAACATTTATCGTGCAGAAAATTTTGCTGGATGATGTAGGGTTGGATT
ATATTTGTACTACAGCTGAGCGATTTTTTGCTGTCGGTCGGGTTCTGGGGAATATGGTAGCAGCTCTTGCTGAACAGCCCTCCTCTCGGCTATTGAAACACATAATTCGA
TGTTATCTTCGACTGTCTGATAACCCAAAGGCTTGCGACGCATTGAGGAGCTGTCTTCCAGATATGTTGAGGGATGCTACTTTCAATAGCTGCCTTCGGGAGGATCCAAC
CACTAGGAGGTGGCTGCAACAGTTGCTACACAATGTAGGAATGAGTAGGGTTCCAGCACTTCAGGCAGGGGCTGGATTTGATCACATGATGGTGAACTAAACCTGAAATC
CAAGTTGTTTGTGTTTGAGTACTTTAGGAGTTTTCTTTTATGATAGGTCTTAGCCATGAAACCTCTTTCATACCAATTTGAGGGCGTGACTTACCAAATGATCTTGAGAA
CACCGAGCATTTGTTCACAACTTTGTGGGTTCTAAGTTGCTCGTTCGTTTTCCTACAATCATTCGAACATTAGTATTCTCATATTTGCCTCAACATTAGTTCCTTCCCAA
TAATCCATTCTAGAAATCGTTGGGATCCGTCTCTTCTTACAATGCCAACCAAAGGAAAGGGAGAAAGGAATGGTAGAGACATGATTGGAATTAGCCCCCACCTCGAGGAA
TAGATGCCGTGACATTCGTTTCGCTTGTTAACTAGTACACTGCTTGTGTATTTTTTACACGAGAGCATACATTGATTGGGGAAGTGTATGTGGAATTTTCATCTTGTTTC
ATTAGTTCATTTGGGTTTGGTGGAGTATGTTGGCTGATCGTCTAATAATGTAGTTGTTTAGCGAATGATTTAGCCTATGTATTTGTTAAATCATTGGAACTCTTTATTCT
GCCTGGTAAGCATTAG
Protein sequenceShow/hide protein sequence
MANLPQSLSMNAAFGGPGPSIPGASGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNAL
ALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCY
LRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVGMSRVPALQAGAGFDHMMVN