; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G018990 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G018990
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionheterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
Genome locationchr02:24924275..24925180
RNA-Seq ExpressionLsi02G018990
SyntenyLsi02G018990
Gene Ontology termsGO:0004659 - prenyltransferase activity (molecular function)
InterPro domainsIPR008949 - Isoprenoid synthase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031902.1 heterodimeric geranylgeranyl pyrophosphate synthase small subunit [Cucumis melo var. makuwa]9.1e-13282.06Show/hide
Query:  MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVG
        MAISLNLLQLQ N A PKFF+ N V PA Y R P RST+ MSQITPSYWAAINEDIEDHLRRVIP KDP AVYEPLGHFI SAPRNSA ALCIAACELVG
Subjt:  MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVG

Query:  GHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRG
        GHRDQAMAAA A+QLIHAA  THEYPPLTA   +RAAVV+RVY  +IQL+TGDGIAP+ FEILA SCDWS  GSERVRRVMVE++RAMGTEGWIGGQFRG
Subjt:  GHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRG

Query:  LEESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIDELKVLAFKELEDFKGEKVHEIYGFLDFEG
        L+E AT EEVIEK EGGLHA G ACGAI+GGG+EEEIEKMRKYGKLVGMVKG++KNVFGGKENE+K+EKI+ELKVLAFKELE F GE VHEIYGFLDF G
Subjt:  LEESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIDELKVLAFKELEDFKGEKVHEIYGFLDFEG

Query:  L
        L
Subjt:  L

XP_004139865.1 heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Cucumis sativus]1.0e-13081.88Show/hide
Query:  MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVG
        MAISLNLLQLQ N A PKFF+ N + P  Y R P RS  VMSQITPSYWAAINEDIEDHLRRVIP KDP AVYEPLGHFIFSAPRNSAPALCIAACELVG
Subjt:  MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVG

Query:  GHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRG
        GHRDQAMAAA A+QLI+AA  THEYPPLTAR   RA+VVDRVYG N+QL+TGDGI P+ FEILA SCDWS  GSERVRRVMVE+ARAMGTEGWIGGQFRG
Subjt:  GHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRG

Query:  LEESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIDELKVLAFKELEDFKGEKVHEIYGFLDF
        LEE AT EEVIEKTEGGLHA G ACGAI+GGG+EEEIEKMRKYGKLVG+VKG+++ VFGGKENERK+EKI+ELKVLAFKELE F GE V +IYGFLDF
Subjt:  LEESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIDELKVLAFKELEDFKGEKVHEIYGFLDF

XP_022975728.1 heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Cucurbita maxima]5.5e-12980.26Show/hide
Query:  MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVG
        MAISLNLLQL  NP+LPKF   N +RPAVYFRAP R+T+VMSQITPSYWAAINEDIE+HLRR+I AKDPP VYEPLGHF+FSAPRNSA A+CIAACE VG
Subjt:  MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVG

Query:  GHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRG
        GHRDQAMAAA ALQLI+AA YT EYPPLTAR  S AA+VDRVY  NIQLLTG GIAPI FEILAGSCD S SGS+RVRRVM EMARAMG+EGWIGGQF+ 
Subjt:  GHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRG

Query:  LEE---SATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIDELKVLAFKELEDFKGEKVHEIYGFLD
        LEE   +A AEEVIEKTEG LHARG ACGAILG GSEEEIEKMRKYG++VGMVKG+SK VFGGKENERK+EKI ELK LAFKELE FKGEKV ++  F D
Subjt:  LEE---SATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIDELKVLAFKELEDFKGEKVHEIYGFLD

Query:  FEGL
        FEGL
Subjt:  FEGL

XP_023536167.1 heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Cucurbita pepo subsp. pepo]9.8e-13483.06Show/hide
Query:  MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVG
        MAISLNLLQL  NP+LPKF   N +RPAVYFRAP R+T+VMSQITPSYWAAINEDI+DHLRRVI AKDPPAVYEPLGHF+FSAPRNSA A+CIAACELVG
Subjt:  MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVG

Query:  GHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRG
        GHRDQAMAAA ALQLI+AA YT EYPPLTAR IS AAVVDRVYG NIQLLTG GIAPI FEILAGSCD S SGSERVRRVMVEMARAMG+EGWIGGQF+ 
Subjt:  GHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRG

Query:  LEESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIDELKVLAFKELEDFKGEKVHEIYGFLDFEG
        LEE   AEEVIE TEG LHARG ACGAILGGGSEEEIEKMRKYG++VGMVKG+SK VFGGKENERK+EKI ELK LAFKELE FKG+KV ++  F DFEG
Subjt:  LEESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIDELKVLAFKELEDFKGEKVHEIYGFLDFEG

Query:  L
        L
Subjt:  L

XP_038896497.1 heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Benincasa hispida]7.4e-15090.03Show/hide
Query:  MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVG
        MAISLNLLQLQANPA PKF KWNPVRPAVYFRAP RST+VMSQITPSYWA INEDIEDHLR+VIPAKDPPAV+EPLGHFIFSAPRNSAPALCIAACELVG
Subjt:  MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVG

Query:  GHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRG
        G RD+AMAAA ALQLIHAA YT EYPPLTAR ISRAAVVDR+YG NIQLLTGD IAPIVFEILAGSCDWS SGSERV+ VMVEMARAMGTEGW+GGQFRG
Subjt:  GHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRG

Query:  LEESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIDELKVLAFKELEDFKGEKVHEIYGFLDFEG
        LEE ATAEEV EKTEGGLHA G ACGAILGGGSEEEIEKMRKYGKLVGMVKG+SKNVFGGKENERK+EKI+E KVLAFK LE FKGEKVHEIYGFLDFEG
Subjt:  LEESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIDELKVLAFKELEDFKGEKVHEIYGFLDFEG

Query:  L
        L
Subjt:  L

TrEMBL top hitse value%identityAlignment
A0A0A0K8P9 Uncharacterized protein4.9e-13181.88Show/hide
Query:  MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVG
        MAISLNLLQLQ N A PKFF+ N + P  Y R P RS  VMSQITPSYWAAINEDIEDHLRRVIP KDP AVYEPLGHFIFSAPRNSAPALCIAACELVG
Subjt:  MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVG

Query:  GHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRG
        GHRDQAMAAA A+QLI+AA  THEYPPLTAR   RA+VVDRVYG N+QL+TGDGI P+ FEILA SCDWS  GSERVRRVMVE+ARAMGTEGWIGGQFRG
Subjt:  GHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRG

Query:  LEESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIDELKVLAFKELEDFKGEKVHEIYGFLDF
        LEE AT EEVIEKTEGGLHA G ACGAI+GGG+EEEIEKMRKYGKLVG+VKG+++ VFGGKENERK+EKI+ELKVLAFKELE F GE V +IYGFLDF
Subjt:  LEESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIDELKVLAFKELEDFKGEKVHEIYGFLDF

A0A1S4DWU7 heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like1.2e-10576.49Show/hide
Query:  MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVG
        MAISLNLLQLQ N A PKFF+ N V PA Y R P RST+ MSQITPSYWAAINEDIEDHLRRVIP KDP AVYEPLGHFI SAPRNSA ALCIAACELVG
Subjt:  MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVG

Query:  GHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRG
        GHRDQAMAAA A+QLIHAA  THEYPPLTA   +RAAVV+RVY  +IQL+TGDGIAP+ FEILA SCDWS  GSERVRRVMVE++RAMGTEGWIGGQFRG
Subjt:  GHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRG

Query:  LEESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKE
        L+E AT EEVIEK EGGLHA G ACGAI+GGG+EEEIEKMRKYGKL+       +  +  +  ER+KE
Subjt:  LEESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKE

A0A2N9F8D7 Uncharacterized protein1.0e-6748.33Show/hide
Query:  QLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMA
        +L  N       + + VRP++    P RS ++      SYWA++N +IE HL++ IP + P  V+EP+ H +F+AP+N+APALC+AACELVGGHRDQAMA
Subjt:  QLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMA

Query:  AAIALQLIHAAAYTHEYPPLTARAISRA-AVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRGLE-----
        AA AL L+HAA++THE+ PLT R   ++  V+   YG NI+LL GD I P  FE+LA S D + + S+R+ RV +E+ RAMG++G + GQ+  LE     
Subjt:  AAIALQLIHAAAYTHEYPPLTARAISRA-AVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRGLE-----

Query:  -----ESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIDELKVLAFKELEDFKGEKVHEIYGFLD
             +    E+V +K EGGLHA G+ACGAILGGGSEEEIEK+R++G  VGM++GM      G++ +  KE ++EL+ LA KELE+FKG KV  I  F++
Subjt:  -----ESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIDELKVLAFKELEDFKGEKVHEIYGFLD

A0A5A7SLD5 Heterodimeric geranylgeranyl pyrophosphate synthase small subunit4.4e-13282.06Show/hide
Query:  MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVG
        MAISLNLLQLQ N A PKFF+ N V PA Y R P RST+ MSQITPSYWAAINEDIEDHLRRVIP KDP AVYEPLGHFI SAPRNSA ALCIAACELVG
Subjt:  MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVG

Query:  GHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRG
        GHRDQAMAAA A+QLIHAA  THEYPPLTA   +RAAVV+RVY  +IQL+TGDGIAP+ FEILA SCDWS  GSERVRRVMVE++RAMGTEGWIGGQFRG
Subjt:  GHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRG

Query:  LEESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIDELKVLAFKELEDFKGEKVHEIYGFLDFEG
        L+E AT EEVIEK EGGLHA G ACGAI+GGG+EEEIEKMRKYGKLVGMVKG++KNVFGGKENE+K+EKI+ELKVLAFKELE F GE VHEIYGFLDF G
Subjt:  LEESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIDELKVLAFKELEDFKGEKVHEIYGFLDFEG

Query:  L
        L
Subjt:  L

A0A6J1IK44 heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like2.7e-12980.26Show/hide
Query:  MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVG
        MAISLNLLQL  NP+LPKF   N +RPAVYFRAP R+T+VMSQITPSYWAAINEDIE+HLRR+I AKDPP VYEPLGHF+FSAPRNSA A+CIAACE VG
Subjt:  MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVG

Query:  GHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRG
        GHRDQAMAAA ALQLI+AA YT EYPPLTAR  S AA+VDRVY  NIQLLTG GIAPI FEILAGSCD S SGS+RVRRVM EMARAMG+EGWIGGQF+ 
Subjt:  GHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRG

Query:  LEE---SATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIDELKVLAFKELEDFKGEKVHEIYGFLD
        LEE   +A AEEVIEKTEG LHARG ACGAILG GSEEEIEKMRKYG++VGMVKG+SK VFGGKENERK+EKI ELK LAFKELE FKGEKV ++  F D
Subjt:  LEE---SATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIDELKVLAFKELEDFKGEKVHEIYGFLD

Query:  FEGL
        FEGL
Subjt:  FEGL

SwissProt top hitse value%identityAlignment
P34802 Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic2.9e-2433.33Show/hide
Query:  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAAYTH-EYPPLTARAISRAAVVD-RVYG
        SY     E +   L   +P ++P  ++E + + + +  +   P LCIAACELVGG    AM AA A+++IH  +  H + P +    + R    + +V+G
Subjt:  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAAYTH-EYPPLTARAISRAAVVD-RVYG

Query:  RNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQF-----RGLEESATAEEVIE-----KTEGGLHARGSACGAILGGGSE
         ++ +L GD +    FE LA +    V    RV R + E+A+A+GTEG + GQ       GL+ +    E +E     KT   L A  +  GAI+GGGS+
Subjt:  RNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQF-----RGLEESATAEEVIE-----KTEGGLHARGSACGAILGGGSE

Query:  EEIEKMRKYGKLVGMV
        +EIE++RK+ + +G++
Subjt:  EEIEKMRKYGKLVGMV

Q39108 Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic1.7e-2729.85Show/hide
Query:  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFS-APRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAAYTH-EYPPLTARAISRAAVVDR-VY
        +YW  +  +I   L   IP K P  +YE + + + +   + + P +C+AACEL GG R  A   A AL+++HAA+  H + P +    + R    +  VY
Subjt:  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFS-APRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAAYTH-EYPPLTARAISRAAVVDR-VY

Query:  GRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRGLEESA-TAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRK
        G  + +L GD + P+ F+ +       +     + R++ E+AR +G+ G   GQ+  LE        V EK  G +    + CG +LGG +E+E++ +R+
Subjt:  GRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRGLEESA-TAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRK

Query:  YGKLVGMVKGM-------SKNVFGGKENERKKEKIDELKVLAFKELEDFK-----GEKVHEIYGFLDF
        YG+ VGM+  +        K  + G   +   E  +ELK  A KEL+ F      G+ +  +Y F+D+
Subjt:  YGKLVGMVKGM-------SKNVFGGKENERKKEKIDELKVLAFKELEDFK-----GEKVHEIYGFLDF

Q94ID7 Geranylgeranyl pyrophosphate synthase, chloroplastic3.5e-2534.11Show/hide
Query:  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAAYTH-EYPPLTARAISRAAVVDR-VYG
        SY       I   L   IP ++P  ++E + + + +  +   PALC+AACELVGG+   AM AA A+++IH  +  H + P +    + R    +  V+G
Subjt:  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAAYTH-EYPPLTARAISRAAVVDR-VYG

Query:  RNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRGLEESATAEEVIEKTEGGLHARGSA--------CGAILGGGSEEE
         ++ +L GD +    FE +A S   +VS S R+ R + E+A+A+G EG + GQ   +    ++E  +EK E  +H   +A         GAILGGG++EE
Subjt:  RNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRGLEESATAEEVIEKTEGGLHARGSA--------CGAILGGGSEEE

Query:  IEKMRKYGKLVGMV
        +EK+RKY + +G++
Subjt:  IEKMRKYGKLVGMV

Q9LHR4 Geranylgeranyl pyrophosphate synthase 12, chloroplastic1.5e-2332.65Show/hide
Query:  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAA--VVDRVYG
        SY     E +   L   +P +DP A+ E + + + +  +   P LCIAACELVGG    AM+AA A+++IH ++  H+  P    A  R       +V+G
Subjt:  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAA--VVDRVYG

Query:  RNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQF-----RGLEESATAEEVIE-----KTEGGLHARGSACGAILGGGSE
         ++ +L GD +  + FE +       V+  ER+ R + E+A+A+GT+G + GQ      +GL       E +E     KT   L A  +  GAI+GGG+E
Subjt:  RNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQF-----RGLEESATAEEVIE-----KTEGGLHARGSACGAILGGGSE

Query:  EEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIDELKVLAFK
        EEI+K+RKYG+ +G++  +  ++    E+  +  K     V+A K
Subjt:  EEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIDELKVLAFK

Q9LRR0 Putative geranylgeranyl pyrophosphate synthase 8, chloroplastic3.3e-2331.94Show/hide
Query:  VIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAA--VVDRVYGRNIQLLTGDGIAPIVF
        ++P ++P  V E + + + +  +   P LCIA CELVGG    AM+AA A+++IH ++  H+  P    A  R       +V+G ++ +L GD +  + F
Subjt:  VIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAA--VVDRVYGRNIQLLTGDGIAPIVF

Query:  EILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRGL-EESATAEEV---------IEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMV
        E +       V+ SER+ R +VE+ARA+GT+G + GQ   L  E     +V         + KT   L A  +  GAI+GGG+EEEIEK+RKY + +G++
Subjt:  EILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRGL-EESATAEEV---------IEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMV

Query:  ------------------KGMSKNVFGGKEN-------ERKKEKIDELKVLAFKELEDFKGEK
                          K   K+V  GK         ER +E  ++L   A ++L  F+ +K
Subjt:  ------------------KGMSKNVFGGKEN-------ERKKEKIDELKVLAFKELEDFKGEK

Arabidopsis top hitse value%identityAlignment
AT3G14510.1 Polyprenyl synthetase family protein1.8e-2432.2Show/hide
Query:  RVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAA--VVDRVYGRNIQLLTGDGIAPIV
        R +P ++P  V E + + + +  +   P LCIA CELVGG    AM+AA A+++IH ++  H+  P    A  R       +V+G ++ +L GD +  + 
Subjt:  RVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAA--VVDRVYGRNIQLLTGDGIAPIV

Query:  FEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRGL-EESATAEEV---------IEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGM
        FE +       V+ SER+ R +VE+ARA+GT+G + GQ   L  E     +V         + KT   L A  +  GAI+GGG+EEEIEK+RKY + +G+
Subjt:  FEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRGL-EESATAEEV---------IEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGM

Query:  V------------------KGMSKNVFGGKEN-------ERKKEKIDELKVLAFKELEDFKGEK
        +                  K   K+V  GK         ER +E  ++L   A ++L  F+ +K
Subjt:  V------------------KGMSKNVFGGKEN-------ERKKEKIDELKVLAFKELEDFKGEK

AT3G29430.1 Terpenoid synthases superfamily protein8.8e-2430.47Show/hide
Query:  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAA--VVDRVYG
        SY     E +   L   +P ++P  + E + + + +  +   P LCIAACELVGG    AM+AA A+++IH ++  H+  P    A  R       + +G
Subjt:  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAA--VVDRVYG

Query:  RNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQF-----RGLEESATAEEVIE-----KTEGGLHARGSACGAILGGGSE
         ++ +L GD +  + FE +    +  V+  ER+ R ++E+A+A+GT+G + GQ      +GL       E +E     KT   L A  +  GAI+GGG+E
Subjt:  RNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQF-----RGLEESATAEEVIE-----KTEGGLHARGSACGAILGGGSE

Query:  EEIEKMRKYGKLVGMV------------------KGMSKNVFGGKEN-------ERKKEKIDELKVLAFKELEDFKGEK
        EEIEK+RKY + +G++                  K   K+V  GK         ER +E  ++L+  A ++L  F  +K
Subjt:  EEIEKMRKYGKLVGMV------------------KGMSKNVFGGKEN-------ERKKEKIDELKVLAFKELEDFKGEK

AT3G32040.1 Terpenoid synthases superfamily protein1.0e-2432.65Show/hide
Query:  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAA--VVDRVYG
        SY     E +   L   +P +DP A+ E + + + +  +   P LCIAACELVGG    AM+AA A+++IH ++  H+  P    A  R       +V+G
Subjt:  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAA--VVDRVYG

Query:  RNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQF-----RGLEESATAEEVIE-----KTEGGLHARGSACGAILGGGSE
         ++ +L GD +  + FE +       V+  ER+ R + E+A+A+GT+G + GQ      +GL       E +E     KT   L A  +  GAI+GGG+E
Subjt:  RNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQF-----RGLEESATAEEVIE-----KTEGGLHARGSACGAILGGGSE

Query:  EEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIDELKVLAFK
        EEI+K+RKYG+ +G++  +  ++    E+  +  K     V+A K
Subjt:  EEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIDELKVLAFK

AT4G36810.1 geranylgeranyl pyrophosphate synthase 12.1e-2533.33Show/hide
Query:  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAAYTH-EYPPLTARAISRAAVVD-RVYG
        SY     E +   L   +P ++P  ++E + + + +  +   P LCIAACELVGG    AM AA A+++IH  +  H + P +    + R    + +V+G
Subjt:  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAAYTH-EYPPLTARAISRAAVVD-RVYG

Query:  RNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQF-----RGLEESATAEEVIE-----KTEGGLHARGSACGAILGGGSE
         ++ +L GD +    FE LA +    V    RV R + E+A+A+GTEG + GQ       GL+ +    E +E     KT   L A  +  GAI+GGGS+
Subjt:  RNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQF-----RGLEESATAEEVIE-----KTEGGLHARGSACGAILGGGSE

Query:  EEIEKMRKYGKLVGMV
        +EIE++RK+ + +G++
Subjt:  EEIEKMRKYGKLVGMV

AT4G38460.1 geranylgeranyl reductase1.2e-2829.85Show/hide
Query:  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFS-APRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAAYTH-EYPPLTARAISRAAVVDR-VY
        +YW  +  +I   L   IP K P  +YE + + + +   + + P +C+AACEL GG R  A   A AL+++HAA+  H + P +    + R    +  VY
Subjt:  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFS-APRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAAYTH-EYPPLTARAISRAAVVDR-VY

Query:  GRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRGLEESA-TAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRK
        G  + +L GD + P+ F+ +       +     + R++ E+AR +G+ G   GQ+  LE        V EK  G +    + CG +LGG +E+E++ +R+
Subjt:  GRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRGLEESA-TAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRK

Query:  YGKLVGMVKGM-------SKNVFGGKENERKKEKIDELKVLAFKELEDFK-----GEKVHEIYGFLDF
        YG+ VGM+  +        K  + G   +   E  +ELK  A KEL+ F      G+ +  +Y F+D+
Subjt:  YGKLVGMVKGM-------SKNVFGGKENERKKEKIDELKVLAFKELEDFK-----GEKVHEIYGFLDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATCTCTCTCAATCTTCTTCAACTTCAAGCAAATCCAGCACTGCCCAAGTTCTTCAAATGGAACCCGGTCCGACCGGCGGTGTATTTCAGAGCTCCGACGAGGTC
AACCATCGTCATGTCGCAGATCACTCCGTCGTACTGGGCGGCCATAAATGAAGATATTGAGGATCATCTCCGGCGGGTCATTCCGGCGAAGGACCCGCCGGCGGTATACG
AGCCGTTGGGTCATTTCATCTTCTCAGCCCCACGAAATTCCGCTCCTGCACTGTGTATTGCCGCCTGCGAGCTCGTCGGCGGCCACCGGGACCAGGCCATGGCGGCAGCT
ATTGCACTCCAACTTATCCACGCGGCGGCGTACACTCACGAATACCCTCCACTGACGGCGCGTGCAATATCACGCGCCGCCGTTGTCGACCGTGTTTATGGCCGCAACAT
CCAGCTGCTGACTGGCGATGGAATAGCTCCGATTGTGTTCGAGATCCTAGCGGGATCTTGCGACTGGAGCGTGAGCGGGTCGGAGCGGGTTCGGCGTGTGATGGTGGAAA
TGGCACGGGCGATGGGGACGGAAGGGTGGATTGGGGGGCAATTTCGGGGATTGGAGGAGTCGGCAACGGCGGAGGAAGTGATCGAGAAGACGGAAGGTGGGCTACACGCG
CGTGGGAGCGCGTGTGGGGCAATATTGGGAGGTGGAAGTGAAGAGGAAATAGAGAAAATGAGGAAATATGGGAAATTGGTGGGAATGGTAAAGGGAATGTCAAAAAATGT
GTTTGGAGGGAAAGAAAATGAGAGAAAGAAAGAGAAAATTGATGAGTTGAAGGTTTTGGCTTTCAAGGAATTGGAAGATTTCAAAGGAGAAAAAGTTCATGAGATCTATG
GATTTCTTGATTTTGAGGGACTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGATCTCTCTCAATCTTCTTCAACTTCAAGCAAATCCAGCACTGCCCAAGTTCTTCAAATGGAACCCGGTCCGACCGGCGGTGTATTTCAGAGCTCCGACGAGGTC
AACCATCGTCATGTCGCAGATCACTCCGTCGTACTGGGCGGCCATAAATGAAGATATTGAGGATCATCTCCGGCGGGTCATTCCGGCGAAGGACCCGCCGGCGGTATACG
AGCCGTTGGGTCATTTCATCTTCTCAGCCCCACGAAATTCCGCTCCTGCACTGTGTATTGCCGCCTGCGAGCTCGTCGGCGGCCACCGGGACCAGGCCATGGCGGCAGCT
ATTGCACTCCAACTTATCCACGCGGCGGCGTACACTCACGAATACCCTCCACTGACGGCGCGTGCAATATCACGCGCCGCCGTTGTCGACCGTGTTTATGGCCGCAACAT
CCAGCTGCTGACTGGCGATGGAATAGCTCCGATTGTGTTCGAGATCCTAGCGGGATCTTGCGACTGGAGCGTGAGCGGGTCGGAGCGGGTTCGGCGTGTGATGGTGGAAA
TGGCACGGGCGATGGGGACGGAAGGGTGGATTGGGGGGCAATTTCGGGGATTGGAGGAGTCGGCAACGGCGGAGGAAGTGATCGAGAAGACGGAAGGTGGGCTACACGCG
CGTGGGAGCGCGTGTGGGGCAATATTGGGAGGTGGAAGTGAAGAGGAAATAGAGAAAATGAGGAAATATGGGAAATTGGTGGGAATGGTAAAGGGAATGTCAAAAAATGT
GTTTGGAGGGAAAGAAAATGAGAGAAAGAAAGAGAAAATTGATGAGTTGAAGGTTTTGGCTTTCAAGGAATTGGAAGATTTCAAAGGAGAAAAAGTTCATGAGATCTATG
GATTTCTTGATTTTGAGGGACTTTAG
Protein sequenceShow/hide protein sequence
MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAA
IALQLIHAAAYTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRGLEESATAEEVIEKTEGGLHA
RGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIDELKVLAFKELEDFKGEKVHEIYGFLDFEGL