; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G019000 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G019000
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein of unknown function, DUF584
Genome locationchr02:24934301..24934873
RNA-Seq ExpressionLsi02G019000
SyntenyLsi02G019000
Gene Ontology termsNA
InterPro domainsIPR007608 - Senescence regulator S40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025150.1 casein kinase II subunit beta-2 [Cucumis melo var. makuwa]1.3e-5468.53Show/hide
Query:  MDGGRIGLSTALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTD-HSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKRE
        MDG R  L+TALWRSFRNGDFEE+DVWNVLND  +TTTSTTT  HSNF T     +SSFLP ASRMIPRPNG  GG  G             IPQW K E
Subjt:  MDGGRIGLSTALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTD-HSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKRE

Query:  GSKNPRK-----LGSEQDDEDGSGGDGGDSEEEEEEEGE-EGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLESL
         SKNPR         E+DDEDG  G G   EEEEEEE E EG E RVPPHEL+AKRLARAQISSFSVFEG GRTLKGRDLSKVRNAVL KTGFLES+
Subjt:  GSKNPRK-----LGSEQDDEDGSGGDGGDSEEEEEEEGE-EGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLESL

KAG6592046.1 hypothetical protein SDJN03_14392, partial [Cucurbita argyrosperma subsp. sororia]6.7e-5667.17Show/hide
Query:  MDGGRIGL---STALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESS----FLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIP
        M GGR G+   S+ALWRSFRNGDFEEEDVW VL +KS  TTS T+D S+F +DS I+ES+     LP ASRMIPR NG G        QI  RSAPRSIP
Subjt:  MDGGRIGL---STALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESS----FLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIP

Query:  QWFKREGSKNPRKLGSEQDD--EDGSGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLES
        QWFK  GSKNPR   SE DD   DG   DGGDS+       +EGF+NR+PPHEL+AKR ARAQISSFSVFEG+GRTLKGRDLSKVRNAVLNKTGFLES
Subjt:  QWFKREGSKNPRKLGSEQDD--EDGSGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLES

KAG7024924.1 hypothetical protein SDJN02_13744, partial [Cucurbita argyrosperma subsp. argyrosperma]8.8e-5667.17Show/hide
Query:  MDGGRIGL---STALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESS----FLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIP
        M GGR G+   S+ALWRSFRNGDFEEEDVW VL +KS  TTS T+D S+F +DS I+ES+     LP ASRMIPR NG G        QI  RSAPRSIP
Subjt:  MDGGRIGL---STALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESS----FLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIP

Query:  QWFKREGSKNPRKLGSEQDD--EDGSGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLES
        QWFK  GSKNPR   SE DD   DG   DGGDS+       +EGF+NR+PPHEL+AKR ARAQISSFSVFEG+GRTLKGRDLSKVRNAVLNKTGFLES
Subjt:  QWFKREGSKNPRKLGSEQDD--EDGSGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLES

XP_022139627.1 uncharacterized protein LOC111010482 [Momordica charantia]2.5e-5869.04Show/hide
Query:  MDGGRIGL---STALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIES----SFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIP
        M+GG  GL   S+ALWRSFRNGDFEEEDVW+VL +KSTTT S ++D S F TDSSI+ S    +  P A  MIPRPNGSG        QI PRSAPRSIP
Subjt:  MDGGRIGL---STALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIES----SFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIP

Query:  QWFKREGSKNPRKLGSEQDDEDGSGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLESL
        QWF   G+KNPRK   E DD+ G G D GDSE+E+    EEGF+ RVPPHEL+AKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVL KTGFLESL
Subjt:  QWFKREGSKNPRKLGSEQDDEDGSGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLESL

XP_038898769.1 uncharacterized protein LOC120086282 [Benincasa hispida]1.9e-7481.68Show/hide
Query:  MDGGRIGLSTALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREG
        MDGGRIGLS+ALWRSFRNGDFEEEDVW+VLNDKS TTTS T DHS F +DS + ES FLP ASRMIPRPN      GG Y QIVPRSAPRSIPQWFKREG
Subjt:  MDGGRIGLSTALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREG

Query:  SKNPRKLGSEQDDEDGSGGDGGD-SEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLESL
        S+NPR +G EQDDEDG  GDGGD S+  EE+E EEGF+NRVPPHEL+AKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLESL
Subjt:  SKNPRKLGSEQDDEDGSGGDGGD-SEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLESL

TrEMBL top hitse value%identityAlignment
A0A0A0K3A6 Uncharacterized protein7.3e-5669.23Show/hide
Query:  MDGGRIGLSTALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREG
        MDGGR  L+TALWRSFRNGDFEEEDVWNVLN+KS     TT+ HS+F TDSSI+ES FLP ASRMIPRPNG  G   G            SIPQW K E 
Subjt:  MDGGRIGLSTALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREG

Query:  SKNPRK---LGSEQDDEDG--SGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLESL
         KNPR       E+DDEDG   GG   + EEEEEEE EEG   RVPPHEL+AKRLARAQISSFSVFEG GRTLKGRDLSKVRNAVL KTGFLESL
Subjt:  SKNPRK---LGSEQDDEDG--SGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLESL

A0A1S3BIQ4 casein kinase II subunit beta-22.3e-5466.83Show/hide
Query:  MDGGRIGLSTALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTD-HSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKRE
        MDG R  L+TALWRSFRNGDFEE+DVWNVLND  +TTTSTTT  HSNF T     +SSFLP ASRMIPRPNG  GG  G             IPQW K E
Subjt:  MDGGRIGLSTALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTD-HSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKRE

Query:  GSKNPRK-----LGSEQDDEDGSGGDGGDSEEEEEEEGE------EGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLE
         SKNPR         E+DDEDG  G G   EEEEEEE E      EG E RVPPHEL+AKRLARAQISSFSVFEG GRTLKGRDLSKVRNAVL KTGFLE
Subjt:  GSKNPRK-----LGSEQDDEDGSGGDGGDSEEEEEEEGE------EGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLE

Query:  SL
        S+
Subjt:  SL

A0A5A7SG90 Casein kinase II subunit beta-26.1e-5568.53Show/hide
Query:  MDGGRIGLSTALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTD-HSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKRE
        MDG R  L+TALWRSFRNGDFEE+DVWNVLND  +TTTSTTT  HSNF T     +SSFLP ASRMIPRPNG  GG  G             IPQW K E
Subjt:  MDGGRIGLSTALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTD-HSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKRE

Query:  GSKNPRK-----LGSEQDDEDGSGGDGGDSEEEEEEEGE-EGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLESL
         SKNPR         E+DDEDG  G G   EEEEEEE E EG E RVPPHEL+AKRLARAQISSFSVFEG GRTLKGRDLSKVRNAVL KTGFLES+
Subjt:  GSKNPRK-----LGSEQDDEDGSGGDGGDSEEEEEEEGE-EGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLESL

A0A6J1CEH3 uncharacterized protein LOC1110104821.2e-5869.04Show/hide
Query:  MDGGRIGL---STALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIES----SFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIP
        M+GG  GL   S+ALWRSFRNGDFEEEDVW+VL +KSTTT S ++D S F TDSSI+ S    +  P A  MIPRPNGSG        QI PRSAPRSIP
Subjt:  MDGGRIGL---STALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIES----SFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIP

Query:  QWFKREGSKNPRKLGSEQDDEDGSGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLESL
        QWF   G+KNPRK   E DD+ G G D GDSE+E+    EEGF+ RVPPHEL+AKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVL KTGFLESL
Subjt:  QWFKREGSKNPRKLGSEQDDEDGSGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLESL

A0A6J1F7L6 uncharacterized protein LOC1114428619.8e-5365.66Show/hide
Query:  MDGGRIG---LSTALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESS----FLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIP
        M GGR G    S+ALWRSFRNGDFEEEDVW VL +KS  TTS T+D S+F +DS I+ES+     LP ASRMIPR NG G        QI  RSAPRSIP
Subjt:  MDGGRIG---LSTALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESS----FLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIP

Query:  QWFKREGSKNPRKLGSEQDD--EDGSGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLES
        QWFK  G KN R   SE DD   DG   DG D       E EEGF+NR+PPHEL+AKR ARAQISSFSVFEG+GRTLKGRDLS+VRNAVLNKTGFLES
Subjt:  QWFKREGSKNPRKLGSEQDD--EDGSGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G45210.1 Protein of unknown function, DUF5845.8e-1340.95Show/hide
Query:  VPRSAPRSIPQWFKREGSKNPRKLGSEQDDEDGSGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNK
        V  S P ++  W K  G +N + +  E DD+ G G                    ++PPHE     LA+ +++SFSV EG+GRTLKGRD+S+VRNA+L K
Subjt:  VPRSAPRSIPQWFKREGSKNPRKLGSEQDDEDGSGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNK

Query:  TGFLE
        TGFL+
Subjt:  TGFLE

AT4G04630.1 Protein of unknown function, DUF5841.2e-2143.93Show/hide
Query:  DFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREG-SKNPRK---LGSEQDDED
        +F+EEDVW+VL +  T++       S+F + SS   SS  P   R     +G           +   SAP ++P W K  G SK+ R+   L S   D+D
Subjt:  DFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREG-SKNPRK---LGSEQDDED

Query:  GSGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLE
            DG                  VPPHE VA++LAR QISSFS+ EGVGRTLKGRDLSKVRNAVL+KTGFLE
Subjt:  GSGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLE

AT4G21970.1 Protein of unknown function, DUF5841.2e-2144.51Show/hide
Query:  DFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREG--SKNPRK-LGSEQDDEDG
        +F+EE+VW+VL +  T         SN    +S   S      +R IP+ N   GG   S       SAP +IP W K  G   KN    L S   D+D 
Subjt:  DFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREG--SKNPRK-LGSEQDDEDG

Query:  SGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLES
         G                   + VPPHELVAKRLAR QISSFS+ EG+GRTLKGRDLSK RNAVL +TGFLES
Subjt:  SGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLES

AT4G26950.1 Protein of unknown function, DUF5842.0e-1335.09Show/hide
Query:  NGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREGSKNPRKLGSEQDDEDGS
        +GDF+E+DVW+VL+       S     SN  T  S    + LP   RMIP    + G        +  +S P ++P W   +  K  + +    DDE+  
Subjt:  NGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREGSKNPRKLGSEQDDEDGS

Query:  GGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLE
                              V P E   +R   +  SS SV EGVGR LKGRDLSKVRNA+L +TGFLE
Subjt:  GGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLE

AT4G26950.2 Protein of unknown function, DUF5842.0e-1335.09Show/hide
Query:  NGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREGSKNPRKLGSEQDDEDGS
        +GDF+E+DVW+VL+       S     SN  T  S    + LP   RMIP    + G        +  +S P ++P W   +  K  + +    DDE+  
Subjt:  NGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREGSKNPRKLGSEQDDEDGS

Query:  GGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLE
                              V P E   +R   +  SS SV EGVGR LKGRDLSKVRNA+L +TGFLE
Subjt:  GGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGCGGCAGAATTGGCCTGAGCACCGCTCTGTGGCGGTCGTTCAGAAACGGCGATTTCGAAGAAGAAGACGTCTGGAACGTTCTCAACGACAAATCCACAACAAC
CACTTCAACAACCACCGATCATTCAAACTTCTGCACCGATTCATCCATTATCGAATCCTCTTTTCTTCCATGCGCTTCCAGAATGATTCCGAGGCCGAACGGCAGCGGCG
GCGGCGGTGGCGGCAGCTATGTTCAGATTGTGCCGAGATCGGCTCCTCGCTCGATTCCACAGTGGTTCAAACGTGAGGGAAGTAAAAACCCTAGGAAACTGGGATCGGAG
CAGGATGATGAGGATGGAAGTGGCGGTGACGGCGGCGATAGCGAGGAGGAGGAGGAGGAGGAGGGAGAAGAAGGATTTGAAAACAGAGTTCCGCCGCATGAATTGGTAGC
GAAGAGATTGGCTAGGGCTCAGATTTCGTCGTTCTCTGTGTTTGAAGGAGTTGGAAGAACTTTGAAAGGGAGGGATCTGAGTAAAGTAAGAAATGCTGTTCTTAACAAAA
CTGGATTTCTTGAATCGCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGGCGGCAGAATTGGCCTGAGCACCGCTCTGTGGCGGTCGTTCAGAAACGGCGATTTCGAAGAAGAAGACGTCTGGAACGTTCTCAACGACAAATCCACAACAAC
CACTTCAACAACCACCGATCATTCAAACTTCTGCACCGATTCATCCATTATCGAATCCTCTTTTCTTCCATGCGCTTCCAGAATGATTCCGAGGCCGAACGGCAGCGGCG
GCGGCGGTGGCGGCAGCTATGTTCAGATTGTGCCGAGATCGGCTCCTCGCTCGATTCCACAGTGGTTCAAACGTGAGGGAAGTAAAAACCCTAGGAAACTGGGATCGGAG
CAGGATGATGAGGATGGAAGTGGCGGTGACGGCGGCGATAGCGAGGAGGAGGAGGAGGAGGAGGGAGAAGAAGGATTTGAAAACAGAGTTCCGCCGCATGAATTGGTAGC
GAAGAGATTGGCTAGGGCTCAGATTTCGTCGTTCTCTGTGTTTGAAGGAGTTGGAAGAACTTTGAAAGGGAGGGATCTGAGTAAAGTAAGAAATGCTGTTCTTAACAAAA
CTGGATTTCTTGAATCGCTATGA
Protein sequenceShow/hide protein sequence
MDGGRIGLSTALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREGSKNPRKLGSE
QDDEDGSGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLESL