; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G019260 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G019260
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSNARE associated Golgi protein family
Genome locationchr02:25174789..25175064
RNA-Seq ExpressionLsi02G019260
SyntenyLsi02G019260
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR045014 - Transmembrane protein 41A/B


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607628.1 putative membrane protein, partial [Cucurbita argyrosperma subsp. sororia]7.7e-3488.51Show/hide
Query:  MAASRNVGVRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKYVFFSSA
        MAASRNV VRDEEKLKEDDSPTAKKPK+ERFPLTKWELAAAL IFL+CFTGLVCVYLTMPSAEYQS+KLPRTLSDLRVLK +F + A
Subjt:  MAASRNVGVRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKYVFFSSA

XP_008461958.1 PREDICTED: uncharacterized membrane protein At4g09580-like [Cucumis melo]2.7e-3489.66Show/hide
Query:  MAASRNVGVRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKYVFFSSA
        MAASRNVG+RDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFL+C TGL+CVYLTMPSAEYQSVKLPRTLSDLRVLK +F + A
Subjt:  MAASRNVGVRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKYVFFSSA

XP_022926209.1 uncharacterized membrane protein At4g09580-like [Cucurbita moschata]3.5e-3488.51Show/hide
Query:  MAASRNVGVRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKYVFFSSA
        MAASRNV VRDEEKLKEDDSPTAKKPK+ERFPLTKWELAAAL IFL+CFTGLVCVYLTMPSAEYQS+KLPRTLSDLRVLK +F + A
Subjt:  MAASRNVGVRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKYVFFSSA

XP_031745009.1 uncharacterized membrane protein At4g09580 [Cucumis sativus]1.2e-3490.8Show/hide
Query:  MAASRNVGVRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKYVFFSSA
        MAASRNVG+RDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFL+C TGLVCVYLTMPSAEYQSVKLPRTLSDLRVLK +F + A
Subjt:  MAASRNVGVRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKYVFFSSA

XP_038900052.1 uncharacterized membrane protein At4g09580 [Benincasa hispida]2.0e-3490.8Show/hide
Query:  MAASRNVGVRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKYVFFSSA
        MAASRNVGVRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFL+C  GLVCVYLTMPSAEYQSVKLPRTLSDLRVLK +F + A
Subjt:  MAASRNVGVRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKYVFFSSA

TrEMBL top hitse value%identityAlignment
A0A0A0K623 Uncharacterized protein5.8e-3590.8Show/hide
Query:  MAASRNVGVRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKYVFFSSA
        MAASRNVG+RDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFL+C TGLVCVYLTMPSAEYQSVKLPRTLSDLRVLK +F + A
Subjt:  MAASRNVGVRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKYVFFSSA

A0A1S4E3J1 uncharacterized membrane protein At4g09580-like1.3e-3489.66Show/hide
Query:  MAASRNVGVRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKYVFFSSA
        MAASRNVG+RDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFL+C TGL+CVYLTMPSAEYQSVKLPRTLSDLRVLK +F + A
Subjt:  MAASRNVGVRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKYVFFSSA

A0A5A7U377 Putative membrane protein1.3e-3489.66Show/hide
Query:  MAASRNVGVRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKYVFFSSA
        MAASRNVG+RDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFL+C TGL+CVYLTMPSAEYQSVKLPRTLSDLRVLK +F + A
Subjt:  MAASRNVGVRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKYVFFSSA

A0A6J1EEH6 uncharacterized membrane protein At4g09580-like1.7e-3488.51Show/hide
Query:  MAASRNVGVRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKYVFFSSA
        MAASRNV VRDEEKLKEDDSPTAKKPK+ERFPLTKWELAAAL IFL+CFTGLVCVYLTMPSAEYQS+KLPRTLSDLRVLK +F + A
Subjt:  MAASRNVGVRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKYVFFSSA

A0A6J1IUC8 uncharacterized membrane protein At4g09580-like3.7e-3487.36Show/hide
Query:  MAASRNVGVRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKYVFFSSA
        MAASRNV VRDEEKLKEDDSPTAKKPK+ERFPLT+WELAAAL IFL+CFTGLVCVYLTMPSAEYQS+KLPRTLSDLRVLK +F + A
Subjt:  MAASRNVGVRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKYVFFSSA

SwissProt top hitse value%identityAlignment
Q8L586 Uncharacterized membrane protein At4g095802.3e-1750.52Show/hide
Query:  MAASRNVG--------VRDEEK---------LKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLK
        MAA RN+         V+DEE          L  DDSPT K+ K ERFPL++WE A    +FL+  TGL C+YLTMP+AEY  +K+PRT+SDLR+LK
Subjt:  MAASRNVG--------VRDEEK---------LKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLK

Arabidopsis top hitse value%identityAlignment
AT1G71940.1 SNARE associated Golgi protein family2.2e-1851.85Show/hide
Query:  ASRNVGVRDEEK---LKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLK
        A   +  RDEE      +DDSP+ K+ K +RFPL++WELA +LG+FL+  +GL C+Y+TMP+AE+  +KLPR+L+DLR+LK
Subjt:  ASRNVGVRDEEK---LKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLK

AT1G71940.2 SNARE associated Golgi protein family2.2e-1851.85Show/hide
Query:  ASRNVGVRDEEK---LKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLK
        A   +  RDEE      +DDSP+ K+ K +RFPL++WELA +LG+FL+  +GL C+Y+TMP+AE+  +KLPR+L+DLR+LK
Subjt:  ASRNVGVRDEEK---LKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLK

AT4G09580.1 SNARE associated Golgi protein family1.7e-1850.52Show/hide
Query:  MAASRNVG--------VRDEEK---------LKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLK
        MAA RN+         V+DEE          L  DDSPT K+ K ERFPL++WE A    +FL+  TGL C+YLTMP+AEY  +K+PRT+SDLR+LK
Subjt:  MAASRNVG--------VRDEEK---------LKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLK

AT4G17790.1 SNARE associated Golgi protein family3.2e-0952Show/hide
Query:  FPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLK
        + L+ WE+ AA G+ L    GLVCVYLTMP ++Y  +KLPR L DL++L+
Subjt:  FPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTTCGAGGAATGTGGGGGTGAGGGATGAGGAGAAACTGAAGGAAGATGACTCTCCGACGGCCAAGAAGCCTAAATTTGAGAGGTTTCCATTGACGAAGTGGGA
GCTAGCGGCGGCTCTCGGCATCTTCCTTATCTGCTTCACTGGCCTTGTCTGTGTGTACTTGACGATGCCTTCTGCAGAATACCAGAGCGTTAAGCTCCCACGAACGCTTT
CGGATCTTCGGGTGCTTAAGTATGTGTTCTTCTCTTCGGCTCCTTTTCGTGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCTTCGAGGAATGTGGGGGTGAGGGATGAGGAGAAACTGAAGGAAGATGACTCTCCGACGGCCAAGAAGCCTAAATTTGAGAGGTTTCCATTGACGAAGTGGGA
GCTAGCGGCGGCTCTCGGCATCTTCCTTATCTGCTTCACTGGCCTTGTCTGTGTGTACTTGACGATGCCTTCTGCAGAATACCAGAGCGTTAAGCTCCCACGAACGCTTT
CGGATCTTCGGGTGCTTAAGTATGTGTTCTTCTCTTCGGCTCCTTTTCGTGTGTGA
Protein sequenceShow/hide protein sequence
MAASRNVGVRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLICFTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKYVFFSSAPFRV