; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G019320 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G019320
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description40S ribosomal protein S4
Genome locationchr02:25252784..25254706
RNA-Seq ExpressionLsi02G019320
SyntenyLsi02G019320
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000876 - Ribosomal protein S4e
IPR002942 - RNA-binding S4 domain
IPR005824 - KOW
IPR013843 - Ribosomal protein S4e, N-terminal
IPR013845 - Ribosomal protein S4e, central region
IPR014722 - Ribosomal protein L2, domain 2
IPR018199 - Ribosomal protein S4e, N-terminal, conserved site
IPR032277 - 40S ribosomal protein S4, C-terminal domain
IPR036986 - RNA-binding S4 domain superfamily
IPR038237 - Ribosomal protein S4e, central domain superfamily
IPR041982 - Ribosomal protein S4, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061270.1 40S ribosomal protein S4-3-like [Cucumis melo var. makuwa]1.7e-14598.86Show/hide
Query:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL
        ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKT+ENFRL
Subjt:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL

Query:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
        LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
Subjt:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH

Query:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA
        KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEA+KRLASQAAVTA
Subjt:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA

XP_004150395.3 40S ribosomal protein S4-3 [Cucumis sativus]1.3e-14598.86Show/hide
Query:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL
        ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL
Subjt:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL

Query:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
        LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
Subjt:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH

Query:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA
        KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEA+KRLASQA VTA
Subjt:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA

XP_022132117.1 40S ribosomal protein S4-3 [Momordica charantia]3.3e-14699.24Show/hide
Query:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL
        ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFRL
Subjt:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL

Query:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
        LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
Subjt:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH

Query:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA
        KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEA+KRLASQAAVTA
Subjt:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA

XP_038899765.1 40S ribosomal protein S4-3-like [Benincasa hispida]1.5e-14699.62Show/hide
Query:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL
        ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL
Subjt:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL

Query:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
        LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
Subjt:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH

Query:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA
        KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEA+KRLASQAAVTA
Subjt:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA

XP_038900121.1 40S ribosomal protein S4-3 [Benincasa hispida]4.4e-14699.24Show/hide
Query:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL
        ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL
Subjt:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL

Query:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
        LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
Subjt:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH

Query:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA
        KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEA+KRLASQAAVTA
Subjt:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA

TrEMBL top hitse value%identityAlignment
A0A0A0K4K7 40S ribosomal protein S41.0e-14598.48Show/hide
Query:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL
        ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKT+ENFRL
Subjt:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL

Query:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
        LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
Subjt:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH

Query:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA
        KGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPKGKGIKLSIIEEA+KRLASQAAVTA
Subjt:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA

A0A5A7UAW2 40S ribosomal protein S41.8e-14598.1Show/hide
Query:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL
        ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMD++SIPKTNENFRL
Subjt:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL

Query:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
        LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNT+DGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
Subjt:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH

Query:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA
        KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEA+KRLASQAAVTA
Subjt:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA

A0A5A7V1R9 40S ribosomal protein S48.0e-14698.86Show/hide
Query:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL
        ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKT+ENFRL
Subjt:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL

Query:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
        LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
Subjt:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH

Query:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA
        KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEA+KRLASQAAVTA
Subjt:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA

A0A6J1BSY6 40S ribosomal protein S41.6e-14699.24Show/hide
Query:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL
        ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFRL
Subjt:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL

Query:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
        LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
Subjt:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH

Query:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA
        KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEA+KRLASQAAVTA
Subjt:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA

A0A6J1D0L7 40S ribosomal protein S41.0e-14598.48Show/hide
Query:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL
        ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVD KVRTDKT+PAGFMDVVSIPKTNENFRL
Subjt:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL

Query:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
        LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
Subjt:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH

Query:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA
        KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKG+KLSIIEEA+KRLASQAAVTA
Subjt:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA

SwissProt top hitse value%identityAlignment
P46299 40S ribosomal protein S49.1e-13992.31Show/hide
Query:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL
        ARGLKKHLKRLNAP+HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHV+VDGKVRTDKT+PAGFMDVVSIPKTNE+FRL
Subjt:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL

Query:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
        LYDTKGRF LH++  +E K+KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKI DFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
Subjt:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH

Query:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAA
        KGSFETIH+QDA GHEFATRLGNVFTIGKGTKPWVSLPK KGIKLSIIEEA+KRLA+Q A
Subjt:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAA

P46300 40S ribosomal protein S47.5e-14191.25Show/hide
Query:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL
        ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++I+RNRLKYALTYREVI+ILMQR V+VDGKVRTDKT+PAGFMDVVSIPKTNENFRL
Subjt:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL

Query:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
        LYDTKGRFRLHS+RDEE+K+KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKI DFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
Subjt:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH

Query:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA
        KGSFET+HIQD+ GHEFATRLGNVFT+GKGTKPWVSLPKGKGIKL+IIE+A+KRLA+Q+A  A
Subjt:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA

P49204 40S ribosomal protein S4-24.4e-14192.31Show/hide
Query:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL
        ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRL
Subjt:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL

Query:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
        LYDTKGRFRLHS++DEEAK+KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREKH
Subjt:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH

Query:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAA
        KGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEA+KRLASQ A
Subjt:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAA

Q8VYK6 40S ribosomal protein S4-33.4e-14192.31Show/hide
Query:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL
        ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRL
Subjt:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL

Query:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
        LYDTKGRFRLHS++DEEAK+KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL++NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREKH
Subjt:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH

Query:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAA
        KGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEA+KRLASQ A
Subjt:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAA

Q93VH9 40S ribosomal protein S4-12.2e-14091.54Show/hide
Query:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL
        ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRL
Subjt:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL

Query:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
        LYDTKGRFRLHS++DEEAK+KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREKH
Subjt:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH

Query:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAA
        KGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEA+KRL++Q A
Subjt:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAA

Arabidopsis top hitse value%identityAlignment
AT2G17360.1 Ribosomal protein S4 (RPS4A) family protein1.5e-14191.54Show/hide
Query:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL
        ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRL
Subjt:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL

Query:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
        LYDTKGRFRLHS++DEEAK+KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREKH
Subjt:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH

Query:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAA
        KGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEA+KRL++Q A
Subjt:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAA

AT2G17360.2 Ribosomal protein S4 (RPS4A) family protein9.8e-9690.56Show/hide
Query:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL
        ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRL
Subjt:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL

Query:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
        LYDTKGRFRLHS++DEEAK+KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVG  V
Subjt:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV

AT5G07090.1 Ribosomal protein S4 (RPS4A) family protein3.1e-14292.31Show/hide
Query:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL
        ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRL
Subjt:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL

Query:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
        LYDTKGRFRLHS++DEEAK+KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREKH
Subjt:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH

Query:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAA
        KGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEA+KRLASQ A
Subjt:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAA

AT5G07090.2 Ribosomal protein S4 (RPS4A) family protein2.5e-13191.77Show/hide
Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
        AK+KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEF
Subjt:  AKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF

Query:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAA
        ATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEA+KRLASQ A
Subjt:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAA

AT5G58420.1 Ribosomal protein S4 (RPS4A) family protein2.4e-14292.31Show/hide
Query:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL
        ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRL
Subjt:  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRL

Query:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH
        LYDTKGRFRLHS++DEEAK+KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL++NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREKH
Subjt:  LYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKH

Query:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAA
        KGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEA+KRLASQ A
Subjt:  KGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCAAGAGGACTGAAGAAGCATTTGAAGAGGCTCAATGCTCCGAAGCATTGGATGCTTGACAAACTTGGTGGTGCATTTGCCCCCAAACCTTCATCTGGACCTCATAAGTC
AAGGGAATGCCTCCCGTTGATCCTTATATTGAGGAACCGATTGAAATATGCTCTCACATATCGTGAGGTAATTGCAATTTTAATGCAACGACATGTTTTGGTCGATGGGA
AGGTCAGGACAGACAAGACTTTCCCTGCTGGTTTCATGGACGTTGTGTCAATTCCCAAGACAAACGAGAATTTTCGGCTTCTTTATGACACAAAAGGTCGATTCCGTCTA
CACTCAGTTAGGGATGAAGAGGCTAAGTATAAGCTGTGCAAAGTTCGGTCAGTGCAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACTTACGATGGACGCACAATCCG
TTATCCCGACCCTCTGATCAAGGCGAATGACACCATCAAGCTGGACCTTGACTCCAACAAGATTGCTGATTTCATCAAGTTTGATGTAGGAAATGTTGTGATGGTGACTG
GTGGAAGAAACAGGGGCAGGGTCGGAGTGATAAAGAACAGGGAGAAGCATAAGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACTGGGCACGAATTTGCAACTCGG
CTGGGCAATGTGTTCACCATTGGCAAAGGGACTAAGCCATGGGTGTCCCTACCCAAGGGCAAGGGTATTAAACTATCCATCATCGAAGAAGCCAAGAAGAGGCTGGCAAG
CCAAGCCGCAGTTACCGCTTAA
mRNA sequenceShow/hide mRNA sequence
GCAAGAGGACTGAAGAAGCATTTGAAGAGGCTCAATGCTCCGAAGCATTGGATGCTTGACAAACTTGGTGGTGCATTTGCCCCCAAACCTTCATCTGGACCTCATAAGTC
AAGGGAATGCCTCCCGTTGATCCTTATATTGAGGAACCGATTGAAATATGCTCTCACATATCGTGAGGTAATTGCAATTTTAATGCAACGACATGTTTTGGTCGATGGGA
AGGTCAGGACAGACAAGACTTTCCCTGCTGGTTTCATGGACGTTGTGTCAATTCCCAAGACAAACGAGAATTTTCGGCTTCTTTATGACACAAAAGGTCGATTCCGTCTA
CACTCAGTTAGGGATGAAGAGGCTAAGTATAAGCTGTGCAAAGTTCGGTCAGTGCAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACTTACGATGGACGCACAATCCG
TTATCCCGACCCTCTGATCAAGGCGAATGACACCATCAAGCTGGACCTTGACTCCAACAAGATTGCTGATTTCATCAAGTTTGATGTAGGAAATGTTGTGATGGTGACTG
GTGGAAGAAACAGGGGCAGGGTCGGAGTGATAAAGAACAGGGAGAAGCATAAGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACTGGGCACGAATTTGCAACTCGG
CTGGGCAATGTGTTCACCATTGGCAAAGGGACTAAGCCATGGGTGTCCCTACCCAAGGGCAAGGGTATTAAACTATCCATCATCGAAGAAGCCAAGAAGAGGCTGGCAAG
CCAAGCCGCAGTTACCGCTTAA
Protein sequenceShow/hide protein sequence
ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRL
HSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATR
LGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA