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Lsi02G019420 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G019420
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPco128534b
Genome locationchr02:25327231..25328204
RNA-Seq ExpressionLsi02G019420
SyntenyLsi02G019420
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RWW00591.1 hypothetical protein GW17_00036438 [Ensete ventricosum]1.8e-0451.81Show/hide
Query:  VNGTVVPNSRDG-AGFTPPP-------GAETELAAAEAAASTSLATILPNGPVPTTVANSTFNSLASFFAYGDATILFPPSDA
        +NGT VPNS  G  G    P       GA    AA  AA STSL TILP GP       S F SLA+F AYG ATI  PPSDA
Subjt:  VNGTVVPNSRDG-AGFTPPP-------GAETELAAAEAAASTSLATILPNGPVPTTVANSTFNSLASFFAYGDATILFPPSDA
RWW59523.1 hypothetical protein BHE74_00033536 [Ensete ventricosum]5.6e-0654.22Show/hide
Query:  VNGTVVPNSRDG-AGFTPPP-------GAETELAAAEAAASTSLATILPNGPVPTTVANSTFNSLASFFAYGDATILFPPSDA
        +NGT VPNS  G  G    P       GA    AA  AA STSLATILP GP P     S F SLA+F AYG ATI  PPSDA
Subjt:  VNGTVVPNSRDG-AGFTPPP-------GAETELAAAEAAASTSLATILPNGPVPTTVANSTFNSLASFFAYGDATILFPPSDA
XP_021910197.1 ACD11 homolog protein-like [Carica papaya]2.3e-1252.11Show/hide
Query:  NHNGSKIAIIESLDVHIGLIGLNDDNTLALGELVAFSLDPGHNLALGHGGAESRHEDLADLGLDLKRPPCR
        +++G K  ++E LDVH+GL+  +D + LALGE VA   DPG++L+LGHGG E  HEDL DLG D + P  R
Subjt:  NHNGSKIAIIESLDVHIGLIGLNDDNTLALGELVAFSLDPGHNLALGHGGAESRHEDLADLGLDLKRPPCR
TrEMBL top hitse value%identityAlignment
A0A0A9J3S3 Pco128534b4.3e-1259.77Show/hide
Query:  MVYPTLKVGTARLSTIFLLTAPCIVVNGTVVPNSRDGAGFTPPPGAETELAAAEAAASTSLATILPNGPVPTTVANSTFNSLASFFA
        MVYPTL VGTARLS +FLLTAPCIVVNGTV PN   G               A A  STSLATI P GP P T   ST  SLASF A
Subjt:  MVYPTLKVGTARLSTIFLLTAPCIVVNGTVVPNSRDGAGFTPPPGAETELAAAEAAASTSLATILPNGPVPTTVANSTFNSLASFFA
A0A2N9EDX8 Uncharacterized protein7.8e-0662.79Show/hide
Query:  LIGLNDDNTLALGELVAFSLDPGHNLALGHGGAESRHEDLADL
        ++ L  D+ LA GEL+AF  DP ++LALGHGGAESRHED+ DL
Subjt:  LIGLNDDNTLALGELVAFSLDPGHNLALGHGGAESRHEDLADL
A0A2N9GGN3 Uncharacterized protein9.2e-1551.69Show/hide
Query:  FRLSLRNLILSLSQKRDCRSNRRNASFINHNGSKIAIIESLDVHIGLIGLNDDNTLALGELVAFSLDPGHNLALGHGGAESRHEDLADL
        +R  LR+ +   S+ R     R   +  + NG + +I++ LDVH+G IGL+DD+ LA GEL+AF  DPG++LALGHGGAESRHEDL DL
Subjt:  FRLSLRNLILSLSQKRDCRSNRRNASFINHNGSKIAIIESLDVHIGLIGLNDDNTLALGELVAFSLDPGHNLALGHGGAESRHEDLADL
A0A2P2LTU8 Uncharacterized protein1.9e-0444.21Show/hide
Query:  IFLLTAPCIVVNGTVV-PNSRDGAGFTPPPGAETELAAA-----------EAAASTSLATILPNGPVPTTVANSTFNSLASFFAYGDATILFPPS
        +FL TA C+VV GT V P SR G G           AAA            AAASTS   ILP GPVP ++  S     A+FFAYG AT+   PS
Subjt:  IFLLTAPCIVVNGTVV-PNSRDGAGFTPPPGAETELAAA-----------EAAASTSLATILPNGPVPTTVANSTFNSLASFFAYGDATILFPPS
A0A444DR55 Uncharacterized protein8.7e-0551.81Show/hide
Query:  VNGTVVPNSRDG-AGFTPPP-------GAETELAAAEAAASTSLATILPNGPVPTTVANSTFNSLASFFAYGDATILFPPSDA
        +NGT VPNS  G  G    P       GA    AA  AA STSL TILP GP       S F SLA+F AYG ATI  PPSDA
Subjt:  VNGTVVPNSRDG-AGFTPPP-------GAETELAAAEAAASTSLATILPNGPVPTTVANSTFNSLASFFAYGDATILFPPSDA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAATCAAGCGCATCTGTTGTAATGGTATACCCCACTCTGAAAGTGGGCACCGCGAGACTCTCAACCATATTCCTACTCACCGCCCCTTGCATTGTGGTAAACGG
CACAGTGGTTCCCAACTCCAGGGATGGGGCGGGCTTCACACCGCCTCCCGGAGCCGAAACTGAGCTAGCAGCAGCAGAAGCCGCAGCTTCAACATCCTTAGCCACAATTC
TCCCCAATGGCCCAGTCCCCACCACCGTCGCCAACTCCACATTCAACTCCTTAGCCAGCTTCTTCGCATACGGAGACGCCACAATTCTCTTCCCCCCTTCAGATGCAGGC
CACTACCACCTTCGCCACCTTCGCCGCCTTCGCCACCGAAACTGGTGCCGCCGCTGCAACCGGTACTGCCGCTGCATTGTCAGGACTCTTCTCCGGCGGAGGTGCCGAAG
CCGGAGAAGCAGAAGAGATGGCAGCTTTAGACTTAGCCTCAGAAATCTCATCCTCAGTCTCAGCCAAAAGCGCGATTGCAGATCCAACAGGCGCAACGCCTCCTTCATCA
ACCATAATGGCAGCAAGATAGCCATCATAGAAAGTCTCGACGTCCATATCGGCCTTATCGGACTCAACGACGACAACACTCTCGCCCTTGGCGAGCTTGTCGCCTTCAGT
CTTGATCCAGGACACAATCTTGCCCTCGGTCATGGTGGAGCTGAGAGCAGGCATGAAGATCTCGCGGATCTTGGCCTGGACTTGAAGAGACCGCCGTGTAGGGTGAAATG
GGTGTCGGAGAAAAGGCCTCCGCCGGAGAGATGGGGAGGAGGCGGCGACGAAGGAGGTGTTGAGAAGATGAGCCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAATCAAGCGCATCTGTTGTAATGGTATACCCCACTCTGAAAGTGGGCACCGCGAGACTCTCAACCATATTCCTACTCACCGCCCCTTGCATTGTGGTAAACGG
CACAGTGGTTCCCAACTCCAGGGATGGGGCGGGCTTCACACCGCCTCCCGGAGCCGAAACTGAGCTAGCAGCAGCAGAAGCCGCAGCTTCAACATCCTTAGCCACAATTC
TCCCCAATGGCCCAGTCCCCACCACCGTCGCCAACTCCACATTCAACTCCTTAGCCAGCTTCTTCGCATACGGAGACGCCACAATTCTCTTCCCCCCTTCAGATGCAGGC
CACTACCACCTTCGCCACCTTCGCCGCCTTCGCCACCGAAACTGGTGCCGCCGCTGCAACCGGTACTGCCGCTGCATTGTCAGGACTCTTCTCCGGCGGAGGTGCCGAAG
CCGGAGAAGCAGAAGAGATGGCAGCTTTAGACTTAGCCTCAGAAATCTCATCCTCAGTCTCAGCCAAAAGCGCGATTGCAGATCCAACAGGCGCAACGCCTCCTTCATCA
ACCATAATGGCAGCAAGATAGCCATCATAGAAAGTCTCGACGTCCATATCGGCCTTATCGGACTCAACGACGACAACACTCTCGCCCTTGGCGAGCTTGTCGCCTTCAGT
CTTGATCCAGGACACAATCTTGCCCTCGGTCATGGTGGAGCTGAGAGCAGGCATGAAGATCTCGCGGATCTTGGCCTGGACTTGAAGAGACCGCCGTGTAGGGTGAAATG
GGTGTCGGAGAAAAGGCCTCCGCCGGAGAGATGGGGAGGAGGCGGCGACGAAGGAGGTGTTGAGAAGATGAGCCATTGA
Protein sequenceShow/hide protein sequence
MKESSASVVMVYPTLKVGTARLSTIFLLTAPCIVVNGTVVPNSRDGAGFTPPPGAETELAAAEAAASTSLATILPNGPVPTTVANSTFNSLASFFAYGDATILFPPSDAG
HYHLRHLRRLRHRNWCRRCNRYCRCIVRTLLRRRCRSRRSRRDGSFRLSLRNLILSLSQKRDCRSNRRNASFINHNGSKIAIIESLDVHIGLIGLNDDNTLALGELVAFS
LDPGHNLALGHGGAESRHEDLADLGLDLKRPPCRVKWVSEKRPPPERWGGGGDEGGVEKMSH