; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G019480 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G019480
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRibonuclease P
Genome locationchr02:25373868..25377407
RNA-Seq ExpressionLsi02G019480
SyntenyLsi02G019480
Gene Ontology termsGO:0001682 - tRNA 5'-leader removal (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030677 - ribonuclease P complex (cellular component)
GO:0004526 - ribonuclease P activity (molecular function)
GO:0033204 - ribonuclease P RNA binding (molecular function)
InterPro domainsIPR002759 - RNase P subunit Pop5/Rpp14/Rnp2-like
IPR038085 - RNase P subunit Pop5/Rpp14/Rnp2-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061295.1 putative ribonuclease P/MRP protein subunit POP5 [Cucumis melo var. makuwa]9.0e-7592.21Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        MVRFKNRYMV EVLLDPNK+LKTDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITTLEN
        LLDLSGNTRACKNTAL+LD L+FEQYKLMVGH LPDNV +QMQNCLEKI  LEN
Subjt:  LLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITTLEN

XP_004139703.1 probable ribonuclease P/MRP protein subunit POP5 [Cucumis sativus]3.6e-7693.51Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        MVRFKNRYMV EVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQVKYVNPITK+CIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITTLEN
        LLDLSGNTRACKNTAL+L+ L+FEQYKLMVGH LPDNVNLQMQNCLEKI TLEN
Subjt:  LLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITTLEN

XP_008461474.1 PREDICTED: probable ribonuclease P/MRP protein subunit POP5 [Cucumis melo]3.4e-7491.56Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        MVRFKNRYMV EVLLDPNK+LKTDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITTLEN
        LLDLSGNTRACKNTAL+LD L+FEQYKLMVGH LPDNV + MQNCLEKI  LEN
Subjt:  LLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITTLEN

XP_022972913.1 probable ribonuclease P/MRP protein subunit POP5 [Cucurbita maxima]7.1e-7288.31Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        MV FKNRY+V EV+LDPNKD+ TDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITTLEN
        LLDL+GN+RACKNTAL++DEL+FEQYKLMVG R+ D VNLQMQNCLEKI TL+N
Subjt:  LLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITTLEN

XP_038899949.1 probable ribonuclease P/MRP protein subunit POP5 [Benincasa hispida]7.8e-7996.75Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITTLEN
        LLDLSGNTRACKNTAL+LD+L+FEQYKLMVGHRLPDNVNLQMQNCLEKI TLE+
Subjt:  LLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITTLEN

TrEMBL top hitse value%identityAlignment
A0A1S3CEI9 Ribonuclease P1.6e-7491.56Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        MVRFKNRYMV EVLLDPNK+LKTDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITTLEN
        LLDLSGNTRACKNTAL+LD L+FEQYKLMVGH LPDNV + MQNCLEKI  LEN
Subjt:  LLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITTLEN

A0A5D3CDD4 Ribonuclease P4.3e-7592.21Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        MVRFKNRYMV EVLLDPNK+LKTDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITTLEN
        LLDLSGNTRACKNTAL+LD L+FEQYKLMVGH LPDNV +QMQNCLEKI  LEN
Subjt:  LLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITTLEN

A0A6J1CLH1 Ribonuclease P3.3e-6782.78Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        MVR++NRY++LEV+LDP KD  TDD IIITQYN+SKAIKDSILLNFGECGFAS+LGSFQV+YVNPITKLCIIR S+EDYQ VWAAITMVRTI NCPV+FN
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITT
        LLDL+GNTRACKNTAL+ +EL+FEQYKLMVG RL D+VNLQMQNCLEKI T
Subjt:  LLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITT

A0A6J1EVL4 Ribonuclease P1.0e-7187.66Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        MV FKNRY+V EV+LDPNKD+ TDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQV+YVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITTLEN
        LLDL+GN+RACKNTAL+LDEL+FEQYKLMVG R+ D VNLQMQNCLEKI +L+N
Subjt:  LLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITTLEN

A0A6J1IBH7 Ribonuclease P3.4e-7288.31Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        MV FKNRY+V EV+LDPNKD+ TDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITTLEN
        LLDL+GN+RACKNTAL++DEL+FEQYKLMVG R+ D VNLQMQNCLEKI TL+N
Subjt:  LLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITTLEN

SwissProt top hitse value%identityAlignment
Q1JQ92 Ribonuclease P/MRP protein subunit POP51.2e-0831.62Show/hide
Query:  MVRFKNRYMVLEVLL-DPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISN----C
        MVRFK+RY++ EV+  DP   L  +D ++ T       ++D+I    G  G A+    F V+Y+N  T + ++R  +E Y+ VW+A+  + ++ N     
Subjt:  MVRFKNRYMVLEVLL-DPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISN----C

Query:  PVVFNLLDLSGNTRACK
        P   N L + G  R C+
Subjt:  PVVFNLLDLSGNTRACK

Q54EP3 Probable ribonuclease P/MRP protein subunit POP51.5e-1130.51Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        MVR KNRY++ EV+   N+         + Q+ +S  +K+ +    GE  + +   + ++ YVNP T + IIR S E Y+++W A+T++ +    P+ F 
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALKL
        ++ + G+ R C+  A+K+
Subjt:  LLDLSGNTRACKNTALKL

Q6AWV1 Probable ribonuclease P/MRP protein subunit POP52.0e-4863.23Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTD-DPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVF
        MV FKNRYM++EV LDP+KDL  +  PII+TQ+N+SKAIKDSIL+NFGECG  SSLGSFQVKYVNPITKLCI+R+SRE+++ VW AIT+V++I NCPV+ 
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTD-DPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVF

Query:  NLLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITTLEN
        NLLD+SG  RAC++TALK D+ +FEQ        L +    QM   LEKI  LEN
Subjt:  NLLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITTLEN

Q969H6 Ribonuclease P/MRP protein subunit POP53.6e-1033.33Show/hide
Query:  MVRFKNRYMVLEVLL-DPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISN----C
        MVRFK+RY++ E++  DP   L  DD ++      S  ++D+I    G  G A+    F V+Y+N  T + ++R  +E YQ VW+A+  +  + N     
Subjt:  MVRFKNRYMVLEVLL-DPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISN----C

Query:  PVVFNLLDLSGNTRACK
        P  FN L + G  R C+
Subjt:  PVVFNLLDLSGNTRACK

Q9UU90 Ribonuclease P/MRP protein subunit POP51.2e-1332.84Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPII-----ITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNC
        MVRFK+RY++ EVL    K+   D P I     IT  ++SK I+  +  NFG+ G      S  VKY +P T   I+R SR+ ++  WAA+ ++R +   
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPII-----ITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNC

Query:  PVVFNLLDLSGNTRACKNTALKLDELRFEQYKLM
        PV+  ++ +SG  +  +  A++ ++       LM
Subjt:  PVVFNLLDLSGNTRACKNTALKLDELRFEQYKLM

Arabidopsis top hitse value%identityAlignment
AT1G04635.1 ribonuclease P family protein / Rpp14 family protein1.4e-4963.23Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTD-DPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVF
        MV FKNRYM++EV LDP+KDL  +  PII+TQ+N+SKAIKDSIL+NFGECG  SSLGSFQVKYVNPITKLCI+R+SRE+++ VW AIT+V++I NCPV+ 
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTD-DPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVF

Query:  NLLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITTLEN
        NLLD+SG  RAC++TALK D+ +FEQ        L +    QM   LEKI  LEN
Subjt:  NLLDLSGNTRACKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITTLEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGGTTTAAAAACCGATACATGGTGCTTGAAGTTCTTTTGGATCCCAATAAAGACCTTAAAACAGATGATCCTATTATCATTACCCAATATAATGTTTCAAAAGC
AATCAAGGACAGTATTCTTCTCAACTTCGGGGAATGTGGTTTTGCTTCCTCACTTGGGTCTTTTCAAGTTAAGTATGTAAATCCAATCACGAAGTTGTGTATTATTAGAG
CCTCCAGAGAGGACTACCAAAATGTCTGGGCTGCAATTACTATGGTGAGGACTATCAGCAATTGCCCCGTTGTATTCAATCTACTGGACCTAAGTGGAAATACAAGGGCT
TGCAAAAACACCGCTTTAAAGCTCGATGAATTGAGGTTTGAGCAATACAAGCTTATGGTTGGACATCGTCTACCAGATAATGTGAATCTGCAAATGCAGAACTGTCTTGA
GAAGATTACAACTTTAGAAAACTGA
mRNA sequenceShow/hide mRNA sequence
GGAAAACCCCAAAAACAAAAAAGGAACCCAGCTTCATCTTCTCCCCCTCTCCCTCACACAGCCGCCGCCGCCCCCTTGCTCAATCTCGTTCGCCGGCGACTACACAGCAA
ACCCACAAGCAGCGGCGGTGGCCATAGACTCCGGCGAACTGTCTTTGTGCATCAGACGTAGCGCTCTTGCGCGTTCCCTTGCTCAACGATCGACGGCGGTGGTTCGGTGT
CGGAAGCGCACGGATCTAGCGTGCGACGCGGGCACCACTTCAGACGCCCTTGCTCGGACCTTCGCAACAACGTTTCTCTCCGTTTCGACGAGTTTCGGCGCTGACCCACA
CCCCAATTGGTCTCAAATCAGTTTACCCATAACGTTTAAGGTTCAGTTCGGCTAGCTCGATCGTTTTTGAACACCAACCAGCAAGGATCAGAGCCTCTTCGGCATATTTT
GTTATCGAAATTAGAAGGAACAAAGCAATGGTGAGGTTTAAAAACCGATACATGGTGCTTGAAGTTCTTTTGGATCCCAATAAAGACCTTAAAACAGATGATCCTATTAT
CATTACCCAATATAATGTTTCAAAAGCAATCAAGGACAGTATTCTTCTCAACTTCGGGGAATGTGGTTTTGCTTCCTCACTTGGGTCTTTTCAAGTTAAGTATGTAAATC
CAATCACGAAGTTGTGTATTATTAGAGCCTCCAGAGAGGACTACCAAAATGTCTGGGCTGCAATTACTATGGTGAGGACTATCAGCAATTGCCCCGTTGTATTCAATCTA
CTGGACCTAAGTGGAAATACAAGGGCTTGCAAAAACACCGCTTTAAAGCTCGATGAATTGAGGTTTGAGCAATACAAGCTTATGGTTGGACATCGTCTACCAGATAATGT
GAATCTGCAAATGCAGAACTGTCTTGAGAAGATTACAACTTTAGAAAACTGATTGTATTGTTGGCATGTATATATTAAGTCCATTCCAAGTGAAATTTTAGTTAGATAGA
TTACTTCATTCCCAGACATTTTTATTCCTTGCACTAGTTGCCCTTTGTATTTATTTCGTTTTGTTTAGATGTATGAGATAATTATCTTGAATTTATATCTAGTAGTTGTT
AAAGATATGAAATTCACATTCACAGATGAGACGGTCACATTGTGACAACTTCATTGAATAAATTTTCATTGTTTG
Protein sequenceShow/hide protein sequence
MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFNLLDLSGNTRA
CKNTALKLDELRFEQYKLMVGHRLPDNVNLQMQNCLEKITTLEN