; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G019830 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G019830
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAnaphase-promoting complex subunit 11
Genome locationchr02:25743639..25746391
RNA-Seq ExpressionLsi02G019830
SyntenyLsi02G019830
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0031145 - anaphase-promoting complex-dependent catabolic process (biological process)
GO:0045842 - positive regulation of mitotic metaphase/anaphase transition (biological process)
GO:0051301 - cell division (biological process)
GO:0005680 - anaphase-promoting complex (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
GO:0097602 - cullin family protein binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR024991 - Anaphase-promoting complex subunit 11, RING-H2 finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4268922.1 unnamed protein product [Prunus armeniaca]2.1e-4585.11Show/hide
Query:  STAHATEQIPSVNVFSGWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
        S +   E+   VN+   WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Subjt:  STAHATEQIPSVNVFSGWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

KAF4359386.1 hypothetical protein G4B88_024053 [Cannabis sativa]9.6e-4680.58Show/hide
Query:  FNLNWYHPCSTAHATEQIPSVNVFSGWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQ
        F+L    P S + A EQ     +   WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQ
Subjt:  FNLNWYHPCSTAHATEQIPSVNVFSGWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQ

Query:  FKG
        FKG
Subjt:  FKG

KGN44481.1 hypothetical protein Csa_016037 [Cucumis sativus]4.5e-5168.61Show/hide
Query:  NSEVCNHLFLPCQITQSF--AFLLPQFNLNWYHPCSTAHATEQIPSVN--------VFSGWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLI
        NSEV N LF P ++ +    +    Q +LNW +PC T    E    ++        V+  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLI
Subjt:  NSEVCNHLFLPCQITQSF--AFLLPQFNLNWYHPCSTAHATEQIPSVN--------VFSGWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLI

Query:  WGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
        WGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Subjt:  WGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

XP_022143644.1 uncharacterized protein LOC111013505 [Momordica charantia]1.5e-4679.61Show/hide
Query:  FNLNWYHPCSTAHATEQIPSVNVFSGWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQ
        F L+W H C      ++  ++     WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQ
Subjt:  FNLNWYHPCSTAHATEQIPSVNVFSGWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQ

Query:  FKG
        FKG
Subjt:  FKG

XP_027367193.1 anaphase-promoting complex subunit 11 isoform X2 [Abrus precatorius]1.6e-4593.98Show/hide
Query:  VNVFSGWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
        VN+   WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Subjt:  VNVFSGWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

TrEMBL top hitse value%identityAlignment
A0A0A0K9J6 Anaphase-promoting complex subunit 112.2e-5168.61Show/hide
Query:  NSEVCNHLFLPCQITQSF--AFLLPQFNLNWYHPCSTAHATEQIPSVN--------VFSGWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLI
        NSEV N LF P ++ +    +    Q +LNW +PC T    E    ++        V+  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLI
Subjt:  NSEVCNHLFLPCQITQSF--AFLLPQFNLNWYHPCSTAHATEQIPSVN--------VFSGWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLI

Query:  WGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
        WGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Subjt:  WGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

A0A314ZDG3 Anaphase-promoting complex subunit 111.8e-4589.77Show/hide
Query:  EQIPSVNVFSGWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
        E+   VN+   WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Subjt:  EQIPSVNVFSGWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

A0A6J1CPX8 Anaphase-promoting complex subunit 117.2e-4779.61Show/hide
Query:  FNLNWYHPCSTAHATEQIPSVNVFSGWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQ
        F L+W H C      ++  ++     WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQ
Subjt:  FNLNWYHPCSTAHATEQIPSVNVFSGWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQ

Query:  FKG
        FKG
Subjt:  FKG

A0A6J5WFW1 Anaphase-promoting complex subunit 111.0e-4585.11Show/hide
Query:  STAHATEQIPSVNVFSGWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
        S +   E+   VN+   WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Subjt:  STAHATEQIPSVNVFSGWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

A0A7J6H3H6 Anaphase-promoting complex subunit 114.7e-4680.58Show/hide
Query:  FNLNWYHPCSTAHATEQIPSVNVFSGWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQ
        F+L    P S + A EQ     +   WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQ
Subjt:  FNLNWYHPCSTAHATEQIPSVNVFSGWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQ

Query:  FKG
        FKG
Subjt:  FKG

SwissProt top hitse value%identityAlignment
Q3ZCF6 Anaphase-promoting complex subunit 114.2e-3672.37Show/hide
Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW+N+Q  Q HCPMCR+EW+FK
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

Q5R8A2 Anaphase-promoting complex subunit 111.6e-3571.05Show/hide
Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW+++Q  Q HCPMCR+EW+FK
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

Q9CPX9 Anaphase-promoting complex subunit 114.2e-3672.37Show/hide
Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW+N+Q  Q HCPMCR+EW+FK
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

Q9M9L0 Anaphase-promoting complex subunit 111.5e-4698.68Show/hide
Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

Q9NYG5 Anaphase-promoting complex subunit 111.6e-3571.05Show/hide
Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW+++Q  Q HCPMCR+EW+FK
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

Arabidopsis top hitse value%identityAlignment
AT3G05870.1 anaphase-promoting complex/cyclosome 111.1e-4798.68Show/hide
Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

AT3G05870.2 anaphase-promoting complex/cyclosome 111.1e-4798.68Show/hide
Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

AT3G42830.1 RING/U-box superfamily protein7.9e-1439.51Show/hide
Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDC-----KLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        W AVA W W+   + C ICR      C +C         ++C + WG CNHAFH HCI +W+  +T Q  CP+   EW+F+
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDC-----KLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

AT5G20570.1 RING-box 11.6e-1439.51Show/hide
Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCK-----LPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        W AVA W W+   + C ICR      C +C+        ++C + WG CNHAFH HCI +W+  +T Q  CP+   EW+F+
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCK-----LPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

AT5G26640.1 BEST Arabidopsis thaliana protein match is: anaphase-promoting complex/cyclosome 11 (TAIR:AT3G05870.2)4.4e-1281.25Show/hide
Query:  TWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
        TW+AQDETCG+CRM FD  CPDCKLP DDCPL
Subjt:  TWNAQDETCGICRMAFDGCCPDCKLPGDDCPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAAGAATTCAGAGGTTTGCAATCATCTCTTTCTACCCTGTCAAATTACTCAGTCTTTCGCTTTCCTCTTACCACAATTCAACTTGAATTGGTATCATCCATGTTC
CACAGCTCATGCCACTGAGCAGATTCCCTCCGTAAACGTATTTTCGGGGTGGCATGCTGTTGCATCATGGACTTGGAATGCCCAAGACGAAACTTGTGGAATCTGTAGGA
TGGCCTTTGATGGTTGTTGCCCTGATTGCAAGCTCCCTGGGGATGATTGTCCATTGATTTGGGGTGCATGCAACCATGCTTTCCATCTTCATTGCATCCTAAAATGGGTG
AATTCACAGACTTCTCAGGCTCATTGCCCCATGTGCCGCAGAGAATGGCAATTCAAGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAAGAATTCAGAGGTTTGCAATCATCTCTTTCTACCCTGTCAAATTACTCAGTCTTTCGCTTTCCTCTTACCACAATTCAACTTGAATTGGTATCATCCATGTTC
CACAGCTCATGCCACTGAGCAGATTCCCTCCGTAAACGTATTTTCGGGGTGGCATGCTGTTGCATCATGGACTTGGAATGCCCAAGACGAAACTTGTGGAATCTGTAGGA
TGGCCTTTGATGGTTGTTGCCCTGATTGCAAGCTCCCTGGGGATGATTGTCCATTGATTTGGGGTGCATGCAACCATGCTTTCCATCTTCATTGCATCCTAAAATGGGTG
AATTCACAGACTTCTCAGGCTCATTGCCCCATGTGCCGCAGAGAATGGCAATTCAAGGGGTGAGACCACAATTGTATTACTTGTGAGTAGTAATAATTGTTACATTTTTT
TCACTCACCCAAGGCCTAGAGACATTAAAGATTTTCCATATTAAATTCACCGACGATTTGAACGTTTGACACCTAGTTAGGTGTTACTGAGAGACAGCCGGCCTTAGCTA
ACGGGGCAACTTCTTGGGGCTATTTTAAGGTTACATTTTTTTCCAATGTATAATATTTGAGAACTGAAGCAGAGTGTGTGTTTCTCAAGTCTTGAAGTTTAATCCTATCA
GGTTTAGATGATATGTGAAATAACCATTAAATCTTTGTTTTCTTTCTGTCATTGGGTGCTATAGAGAAAGTGGAATTGTGG
Protein sequenceShow/hide protein sequence
MGKNSEVCNHLFLPCQITQSFAFLLPQFNLNWYHPCSTAHATEQIPSVNVFSGWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWV
NSQTSQAHCPMCRREWQFKG