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Lsi02G020070 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G020070
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptiontracheary element differentiation-related 7
Genome locationchr02:26019471..26019926
RNA-Seq ExpressionLsi02G020070
SyntenyLsi02G020070
Gene Ontology termsGO:0009834 - plant-type secondary cell wall biogenesis (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016301 - kinase activity (molecular function)
InterPro domainsIPR044950 - Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6/7


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646200.1 hypothetical protein Csa_016148 [Cucumis sativus]5.5e-5387.2Show/hide
Query:  MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVM
        MA EN SNL RI PPPPFKPSPL PPPSPDGHTAIIVIVFISLGSCLFFV F+AAAVCCFIKKRKKKS PQEV EAI IDGHRKVHE+VAE  HGQ+AV+
Subjt:  MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVM

Query:  VTIEDDVHIDEIVKKKEHGHGHGLH
        VTIEDD+HIDEIVKKKEHGHGHGLH
Subjt:  VTIEDDVHIDEIVKKKEHGHGHGLH

KAG6607661.1 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6, partial [Cucurbita argyrosperma subsp. sororia]9.8e-4268.87Show/hide
Query:  MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAA-VCCFIKKRKKKSSPQ-EVAEAIRIDGHRKVHENVAEGSHGQKA
        MAA+N SNL RISPPP       PP PSP+GHTA+IVIVFISLGSCL F  F+AAA  CCFIKKR KK  P+ EVAE I +DGHRKVHE+VA+ +HG++A
Subjt:  MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAA-VCCFIKKRKKKSSPQ-EVAEAIRIDGHRKVHENVAEGSHGQKA

Query:  VMVTIEDDVHIDEIVKKKEHGHGHGLHGKQHEGGSHNNNSTTMEVAASSST
        VMVTIEDDVHIDEI KKKEH HG GLHGK HEG    +NS+T++V  SSST
Subjt:  VMVTIEDDVHIDEIVKKKEHGHGHGLHGKQHEGGSHNNNSTTMEVAASSST

TYK04341.1 proline-rich receptor-like protein kinase PERK2 [Cucumis melo var. makuwa]2.0e-6688.74Show/hide
Query:  MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVM
        MA EN SNL RI PPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFV F+A  VCCFIKKRKKKS PQEV EAIRIDGHRKVHE+VAE  HGQ+A++
Subjt:  MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVM

Query:  VTIEDDVHIDEIVKKKEHGHGHGLHGKQHEGGSHNNNSTTMEVAASSSTTS
        VTIEDDVHIDEIVKKKEHGHGHGLHGKQHEGGSHNNNSTTMEVAASSS+TS
Subjt:  VTIEDDVHIDEIVKKKEHGHGHGLHGKQHEGGSHNNNSTTMEVAASSSTTS

XP_022981645.1 uncharacterized protein LOC111480702 [Cucurbita maxima]4.9e-4168.21Show/hide
Query:  MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAA-VCCFIKKRKKKSSPQ-EVAEAIRIDGHRKVHENVAEGSHGQKA
        MAA+N SNL RI PPP       PP PSP+GHTA+IVIVFISLGSCL F  F+AAA  CCFIKKR KK  P+ EVAE IR+DGHRKVHE+VA+ +HG++A
Subjt:  MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAA-VCCFIKKRKKKSSPQ-EVAEAIRIDGHRKVHENVAEGSHGQKA

Query:  VMVTIEDDVHIDEIVKKKEHGHGHGLHGKQHEGGSHNNNSTTMEVAASSST
        V VTIEDDVHIDEI KKKEH HG GLHGK HEG    +NS+T++V  SSST
Subjt:  VMVTIEDDVHIDEIVKKKEHGHGHGLHGKQHEGGSHNNNSTTMEVAASSST

XP_023521688.1 uncharacterized protein LOC111785526 [Cucurbita pepo subsp. pepo]7.5e-4268.87Show/hide
Query:  MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAA-VCCFIKKRKKKSSPQ-EVAEAIRIDGHRKVHENVAEGSHGQKA
        MAA+N SNLARISPPP       PP PSP+GHTA+IVIVFISLGSCL F  F+AAA  CCFIKKR KK  P+ +VAE I +DGHRKVHE+VA+ +HG++A
Subjt:  MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAA-VCCFIKKRKKKSSPQ-EVAEAIRIDGHRKVHENVAEGSHGQKA

Query:  VMVTIEDDVHIDEIVKKKEHGHGHGLHGKQHEGGSHNNNSTTMEVAASSST
        VMVTIEDDVHIDEI KKKEH HG GLHGK HEG    +NS+T++V  SSST
Subjt:  VMVTIEDDVHIDEIVKKKEHGHGHGLHGKQHEGGSHNNNSTTMEVAASSST

TrEMBL top hitse value%identityAlignment
A0A0A0K4D1 Uncharacterized protein2.8e-6688.74Show/hide
Query:  MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVM
        MA EN SNL RI PPPPFKPSPL PPPSPDGHTAIIVIVFISLGSCLFFV F+AAAVCCFIKKRKKKS PQEV EAI IDGHRKVHE+VAE  HGQ+AV+
Subjt:  MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVM

Query:  VTIEDDVHIDEIVKKKEHGHGHGLHGKQHEGGSHNNNSTTMEVAASSSTTS
        VTIEDD+HIDEIVKKKEHGHGHGLHGKQHEGGSHNNNSTTMEVAASSS+TS
Subjt:  VTIEDDVHIDEIVKKKEHGHGHGLHGKQHEGGSHNNNSTTMEVAASSSTTS

A0A5D3BXC9 Proline-rich receptor-like protein kinase PERK29.5e-6788.74Show/hide
Query:  MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVM
        MA EN SNL RI PPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFV F+A  VCCFIKKRKKKS PQEV EAIRIDGHRKVHE+VAE  HGQ+A++
Subjt:  MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVM

Query:  VTIEDDVHIDEIVKKKEHGHGHGLHGKQHEGGSHNNNSTTMEVAASSSTTS
        VTIEDDVHIDEIVKKKEHGHGHGLHGKQHEGGSHNNNSTTMEVAASSS+TS
Subjt:  VTIEDDVHIDEIVKKKEHGHGHGLHGKQHEGGSHNNNSTTMEVAASSSTTS

A0A6J1DM43 uncharacterized protein LOC1110217153.9e-2862.6Show/hide
Query:  DGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSS--PQEVAEAIRIDGHRKVHENVA--EGSHGQKAVMVTIEDDVHIDEIVKKKEHGHGHG-L
        +GH A+IVIVFISLG+C FF   + AA+CCFI K+KKK S   QEVAE I +DGHRK+HE  A   G HG +AV+VTIED+V IDE++KKKEHG GHG L
Subjt:  DGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSS--PQEVAEAIRIDGHRKVHENVA--EGSHGQKAVMVTIEDDVHIDEIVKKKEHGHGHG-L

Query:  HGKQHEGGSHNNNSTTMEVAASS
        HGK   GG    NS++MEVA SS
Subjt:  HGKQHEGGSHNNNSTTMEVAASS

A0A6J1EEE4 uncharacterized protein LOC1114334584.4e-4066.23Show/hide
Query:  MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAA-VCCFIKKRKKKSSPQ-EVAEAIRIDGHRKVHENVAEGSHGQKA
        MAA+N SNL RIS           PPPSP+GHTA+IVIVFISLGSCL F  F+AAA  CCFIKKR KK  P+ EVAE I +DGHRKVHE+VA+ +HG++A
Subjt:  MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAA-VCCFIKKRKKKSSPQ-EVAEAIRIDGHRKVHENVAEGSHGQKA

Query:  VMVTIEDDVHIDEIVKKKEHGHGHGLHGKQHEGGSHNNNSTTMEVAASSST
        VMVTIEDDVH+DEI KKKEH HG GLHGK HEG    +NS+T++V  SSST
Subjt:  VMVTIEDDVHIDEIVKKKEHGHGHGLHGKQHEGGSHNNNSTTMEVAASSST

A0A6J1J036 uncharacterized protein LOC1114807022.4e-4168.21Show/hide
Query:  MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAA-VCCFIKKRKKKSSPQ-EVAEAIRIDGHRKVHENVAEGSHGQKA
        MAA+N SNL RI PPP       PP PSP+GHTA+IVIVFISLGSCL F  F+AAA  CCFIKKR KK  P+ EVAE IR+DGHRKVHE+VA+ +HG++A
Subjt:  MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAA-VCCFIKKRKKKSSPQ-EVAEAIRIDGHRKVHENVAEGSHGQKA

Query:  VMVTIEDDVHIDEIVKKKEHGHGHGLHGKQHEGGSHNNNSTTMEVAASSST
        V VTIEDDVHIDEI KKKEH HG GLHGK HEG    +NS+T++V  SSST
Subjt:  VMVTIEDDVHIDEIVKKKEHGHGHGLHGKQHEGGSHNNNSTTMEVAASSST

SwissProt top hitse value%identityAlignment
C1PGW0 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 65.1e-0941.57Show/hide
Query:  AIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHI---DEIVKKKEHG
        A I IVF+S G C+F +   A  +CC IKK  K S   E  E + +D H +VHEN+ +G +G K V +T++DD+H+   +E VK ++ G
Subjt:  AIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHI---DEIVKKKEHG

C1PGW1 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7A1.0e-1746.09Show/hide
Query:  ISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHIDE
        +SPPPP      PPPPSP  H+  IV++F+S G  +FF+ F  AA+ CF+KK+KKK    + AE I  D HRKV E + +G HG +  ++++EDD+HI+E
Subjt:  ISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHIDE

Query:  IVKKKE-HGHGHGLH
         +KK E      GLH
Subjt:  IVKKKE-HGHGHGLH

Q8LBX7 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 66.2e-1544.09Show/hide
Query:  PPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHIDEIVKKKE
        P P+PD  T ++V+VF+SLG C+ F+ F+A  +   IKKR +K   +E +EA+R+D H K+ E + EG +GQK+V++++EDDV I++ +K++E
Subjt:  PPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHIDEIVKKKE

Q9FI79 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 72.1e-1546.15Show/hide
Query:  PPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHIDEIV
        PPPP    P PP P+P  H  +I++V ISLGS LFF+ F+AAA+ C++KKR+K S+    AE I  D H KV E + +G HG++  +V +E+D+H+ E +
Subjt:  PPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHIDEIV

Query:  KKKE
         K E
Subjt:  KKKE

Arabidopsis top hitse value%identityAlignment
AT1G43790.1 tracheary element differentiation-related 64.4e-1644.09Show/hide
Query:  PPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHIDEIVKKKE
        P P+PD  T ++V+VF+SLG C+ F+ F+A  +   IKKR +K   +E +EA+R+D H K+ E + EG +GQK+V++++EDDV I++ +K++E
Subjt:  PPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHIDEIVKKKE

AT5G48920.1 tracheary element differentiation-related 71.5e-1646.15Show/hide
Query:  PPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHIDEIV
        PPPP    P PP P+P  H  +I++V ISLGS LFF+ F+AAA+ C++KKR+K S+    AE I  D H KV E + +G HG++  +V +E+D+H+ E +
Subjt:  PPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHIDEIV

Query:  KKKE
         K E
Subjt:  KKKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCGGAAAATGGTTCGAATCTCGCTCGCATCTCTCCGCCTCCGCCGTTTAAGCCATCCCCATTGCCGCCACCGCCATCACCCGACGGTCACACAGCAATCATCGT
AATCGTTTTCATTTCCTTAGGCTCTTGTCTTTTCTTCGTCGTTTTCATTGCAGCTGCCGTTTGTTGTTTTATCAAAAAGAGAAAGAAGAAGTCATCTCCTCAAGAAGTTG
CAGAGGCCATCCGTATCGATGGACATCGGAAAGTCCATGAAAATGTTGCGGAGGGCAGCCATGGGCAGAAGGCGGTGATGGTGACGATCGAGGACGATGTCCATATCGAC
GAAATCGTTAAGAAGAAGGAGCATGGACATGGCCATGGCTTGCATGGTAAGCAACATGAAGGAGGCAGCCATAATAATAATTCTACCACAATGGAAGTAGCAGCTTCTTC
TTCTACTACTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCGGAAAATGGTTCGAATCTCGCTCGCATCTCTCCGCCTCCGCCGTTTAAGCCATCCCCATTGCCGCCACCGCCATCACCCGACGGTCACACAGCAATCATCGT
AATCGTTTTCATTTCCTTAGGCTCTTGTCTTTTCTTCGTCGTTTTCATTGCAGCTGCCGTTTGTTGTTTTATCAAAAAGAGAAAGAAGAAGTCATCTCCTCAAGAAGTTG
CAGAGGCCATCCGTATCGATGGACATCGGAAAGTCCATGAAAATGTTGCGGAGGGCAGCCATGGGCAGAAGGCGGTGATGGTGACGATCGAGGACGATGTCCATATCGAC
GAAATCGTTAAGAAGAAGGAGCATGGACATGGCCATGGCTTGCATGGTAAGCAACATGAAGGAGGCAGCCATAATAATAATTCTACCACAATGGAAGTAGCAGCTTCTTC
TTCTACTACTTCTTGA
Protein sequenceShow/hide protein sequence
MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHID
EIVKKKEHGHGHGLHGKQHEGGSHNNNSTTMEVAASSSTTS