; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G020450 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G020450
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-protein homolog
Genome locationchr02:26599770..26601415
RNA-Seq ExpressionLsi02G020450
SyntenyLsi02G020450
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOX94034.1 Uncharacterized protein TCM_003121 [Theobroma cacao]1.5e-2242.98Show/hide
Query:  KSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFK-DAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNE
        ++ +++LV+ +C    +SQ     S+ ++  VH+INGF  +  +  HCKSKD+DLG  ++PV GEFQW FRT+FF RT F CH+WW+ G  T   +W ++
Subjt:  KSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFK-DAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNE

Query:  EFKREACGDGHCRWKADARGI
        +F    CG G+CRW++   GI
Subjt:  EFKREACGDGHCRWKADARGI

KAA0050599.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]1.0e-4265.6Show/hide
Query:  MGIHKSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYW
        MG  KS I+LLVI   L+T+L+QVS   + FDK+YVHIINGF +A IG HC+SKD+DL  Q++PV GEFQW+FRTNFFG TLF+CHVWW  G ITYKAYW
Subjt:  MGIHKSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYW

Query:  DNEEFKREACGDGHCRWKADARGIS
           +F+   CGDGHCRWKAD +GIS
Subjt:  DNEEFKREACGDGHCRWKADARGIS

KAE7997940.1 hypothetical protein FH972_002526 [Carpinus fangiana]2.6e-2243.1Show/hide
Query:  LLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKRE
        L L + + L   +SQ S   SL  KY V I NGF++  + + C+S+D+DLG Q++PV GEFQW+FR N++G TL+FC++WW+ G+     +W + +F  +
Subjt:  LLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKRE

Query:  ACGDGHCRWKADARGI
         CGD  CRW     GI
Subjt:  ACGDGHCRWKADARGI

KAE8646226.1 hypothetical protein Csa_016670 [Cucumis sativus]5.8e-5141.16Show/hide
Query:  MGIHKSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYW
        MGI KS I+LLVI I L+ +L+QVS   +LF+K+YVHIINGF +A IG HC+SKD+DLG Q++PV  EF WNFRTNF G TLF+CHVWW  G+ITYKAYW
Subjt:  MGIHKSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYW

Query:  DNEEFKREACGDGHCRWKADARGISNF--------------------------NLSDAFFDKYYVNIINDFD-NMTIEAHCRSKDNDLGNNFIP------
           +F+   CGDGHCRWKAD +G+S++                          N+  AF  +++V +IN  + +  +  HCRS+D+DLG   +P      
Subjt:  DNEEFKREACGDGHCRWKADARGISNF--------------------------NLSDAFFDKYYVNIINDFD-NMTIEAHCRSKDNDLGNNFIP------

Query:  --------------IRIE-----GH----ITYQAYWHEDNFERDVCGDGHCRWKANAQGISSFNVGQNVYQLKFKWE
                       R++     GH      ++ +WH+     D CG  +C W A   GI   N  + + QL + WE
Subjt:  --------------IRIE-----GH----ITYQAYWHEDNFERDVCGDGHCRWKANAQGISSFNVGQNVYQLKFKWE

XP_031745088.1 S-protein homolog 3-like [Cucumis sativus]3.4e-4356.95Show/hide
Query:  MGIHKSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYW
        MGI KS I+LLVI I L+ +L+QVS   +LF+K+YVHIINGF +A IG HC+SKD+DLG Q++PV  EF WNFRTNF G TLF+CHVWW  G+ITYKAYW
Subjt:  MGIHKSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYW

Query:  DNEEFKREACGDGHCRWKADARGISNFNLSDAFF--DKYYVNIINDFDNMT
           +F+   CGDGHCRWKAD +G+S++ +       + + V     FD MT
Subjt:  DNEEFKREACGDGHCRWKADARGISNFNLSDAFF--DKYYVNIINDFDNMT

TrEMBL top hitse value%identityAlignment
A0A061DMI7 S-protein homolog7.3e-2342.98Show/hide
Query:  KSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFK-DAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNE
        ++ +++LV+ +C    +SQ     S+ ++  VH+INGF  +  +  HCKSKD+DLG  ++PV GEFQW FRT+FF RT F CH+WW+ G  T   +W ++
Subjt:  KSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFK-DAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNE

Query:  EFKREACGDGHCRWKADARGI
        +F    CG G+CRW++   GI
Subjt:  EFKREACGDGHCRWKADARGI

A0A0A0K4G8 S-protein homolog7.5e-4458.99Show/hide
Query:  MGIHKSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYW
        MGI KS I+LLVI I L+ +L+QVS   +LF+K+YVHIINGF +A IG HC+SKD+DLG Q++PV  EF WNFRTNF G TLF+CHVWW  G+ITYKAYW
Subjt:  MGIHKSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYW

Query:  DNEEFKREACGDGHCRWKADARGISNFNLSDAFFDKYYV
           +F+   CGDGHCRWKAD +G+S++ +    +   Y+
Subjt:  DNEEFKREACGDGHCRWKADARGISNFNLSDAFFDKYYV

A0A5A7UAS5 S-protein homolog4.8e-4365.6Show/hide
Query:  MGIHKSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYW
        MG  KS I+LLVI   L+T+L+QVS   + FDK+YVHIINGF +A IG HC+SKD+DL  Q++PV GEFQW+FRTNFFG TLF+CHVWW  G ITYKAYW
Subjt:  MGIHKSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYW

Query:  DNEEFKREACGDGHCRWKADARGIS
           +F+   CGDGHCRWKAD +GIS
Subjt:  DNEEFKREACGDGHCRWKADARGIS

A0A5N6QH10 S-protein homolog1.6e-2242.24Show/hide
Query:  LLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKRE
        L L + + L   +SQ S   SL  KY V + NGF++  + + C+S+D+DLG Q++PV GEFQW+FR N++G TL+FC++WW+ G+     +W + +F  +
Subjt:  LLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKRE

Query:  ACGDGHCRWKADARGI
         CGD  CRW     GI
Subjt:  ACGDGHCRWKADARGI

A0A5N6QIK7 S-protein homolog1.2e-2243.1Show/hide
Query:  LLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKRE
        L L + + L   +SQ S   SL  KY V I NGF++  + + C+S+D+DLG Q++PV GEFQW+FR N++G TL+FC++WW+ G+     +W + +F  +
Subjt:  LLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKRE

Query:  ACGDGHCRWKADARGI
         CGD  CRW     GI
Subjt:  ACGDGHCRWKADARGI

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 21.2e-0931.17Show/hide
Query:  MGIHKSCILLLVICICLNTQLSQV------------SGEISLF--DKYYVHIINGFKDAM-IGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFC
        M I K  + L ++ I + T+LSQ             S   S+F   K  V I N   + + +  HCKSKD+DLG + +  G  + ++F   FFGRTL+FC
Subjt:  MGIHKSCILLLVICICLNTQLSQV------------SGEISLF--DKYYVHIINGFKDAM-IGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFC

Query:  HVWWNEGYITYKAYWDNEEFKRE-ACGDGHCRWKADARGISNFNLSDAFFDKYY
           W     ++  Y D+ +   +  C    C WK    G   FN     FD  Y
Subjt:  HVWWNEGYITYKAYWDNEEFKRE-ACGDGHCRWKADARGISNFNLSDAFFDKYY

F4JLS0 S-protein homolog 19.8e-0927.41Show/hide
Query:  SCILLLVICICLNTQLS-----QVSGE------ISLFDKYYVHIINGFKDA-MIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGY
        +CI   ++ IC +  L+      V G       +    ++ V ++NG      + +HCKSK++DLGE  +     F WNF  N    T F+C++  + G+
Subjt:  SCILLLVICICLNTQLS-----QVSGE------ISLFDKYYVHIINGFKDA-MIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGY

Query:  ITYKAYWDNEEFKREACGDGHCRWKADARGISNFN
        +    +WD +      CG  +C W A   G+  +N
Subjt:  ITYKAYWDNEEFKREACGDGHCRWKADARGISNFN

Q2HQ46 S-protein homolog 741.3e-0831.96Show/hide
Query:  KYYVHIINGFKDA-MIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKREACGDGHCRWKADARGISNFN
        ++ V + NG      + +HCKSK+NDLG+  +     F WNF  N    TLF+C++  ++G++  K +WD +      C   +C W A   G+  +N
Subjt:  KYYVHIINGFKDA-MIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKREACGDGHCRWKADARGISNFN

Q40975 Self-incompatibility protein S12.2e-0830.37Show/hide
Query:  LLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDA-MIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNE----GYITYKAYWDNEE
        +  + + L+  LS+ SG    F    V I+N   +   IG+HC+SKDNDL  Q V  G +  ++FR +FF  T F+C + W++    G+ +Y+A  D++ 
Subjt:  LLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDA-MIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNE----GYITYKAYWDNEE

Query:  FKREACGDGHCRWKADARGISNFNLSDAFFDKYYV
             C    C WK    G+  F+     +  Y++
Subjt:  FKREACGDGHCRWKADARGISNFNLSDAFFDKYYV

Q9FMQ4 S-protein homolog 32.6e-0929.5Show/hide
Query:  IHKSCILLLVICICLNTQLSQVSG--EISLFDKYYVHIINGFKDAM-IGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAY
        I K+ + ++VI + +    SQV    +++      V I N   D + + +HCKS D+DLG + +   G + + FRT+  G TLF+CH  W      +  Y
Subjt:  IHKSCILLLVICICLNTQLSQVSG--EISLFDKYYVHIINGFKDAM-IGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAY

Query:  WDNEEFKREACGDGHCRWKADARGISNFNLSDAFFDKYY
         D+ +  R      +C W    +G   F+ SD  F+  Y
Subjt:  WDNEEFKREACGDGHCRWKADARGISNFNLSDAFFDKYY

Arabidopsis top hitse value%identityAlignment
AT3G17080.1 Plant self-incompatibility protein S1 family4.1e-1026.09Show/hide
Query:  MGIHKSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYW
        MG  ++C+L  V+ + ++  +S+ S  + +++      + G     +  HCKS+++DLG Q +  G  + + F  + FGRTLF+C   W      +  Y 
Subjt:  MGIHKSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYW

Query:  DNEEFKREACGDGHCRWKADARGISNFNLSDAFFDKYY
         + + + +  G   C WK    G   F      FD  Y
Subjt:  DNEEFKREACGDGHCRWKADARGISNFNLSDAFFDKYY

AT4G16195.1 Plant self-incompatibility protein S1 family8.2e-1131.17Show/hide
Query:  MGIHKSCILLLVICICLNTQLSQV------------SGEISLF--DKYYVHIINGFKDAM-IGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFC
        M I K  + L ++ I + T+LSQ             S   S+F   K  V I N   + + +  HCKSKD+DLG + +  G  + ++F   FFGRTL+FC
Subjt:  MGIHKSCILLLVICICLNTQLSQV------------SGEISLF--DKYYVHIINGFKDAM-IGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFC

Query:  HVWWNEGYITYKAYWDNEEFKRE-ACGDGHCRWKADARGISNFNLSDAFFDKYY
           W     ++  Y D+ +   +  C    C WK    G   FN     FD  Y
Subjt:  HVWWNEGYITYKAYWDNEEFKRE-ACGDGHCRWKADARGISNFNLSDAFFDKYY

AT4G16295.1 S-protein homologue 17.0e-1027.41Show/hide
Query:  SCILLLVICICLNTQLS-----QVSGE------ISLFDKYYVHIINGFKDA-MIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGY
        +CI   ++ IC +  L+      V G       +    ++ V ++NG      + +HCKSK++DLGE  +     F WNF  N    T F+C++  + G+
Subjt:  SCILLLVICICLNTQLS-----QVSGE------ISLFDKYYVHIINGFKDA-MIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGY

Query:  ITYKAYWDNEEFKREACGDGHCRWKADARGISNFN
        +    +WD +      CG  +C W A   G+  +N
Subjt:  ITYKAYWDNEEFKREACGDGHCRWKADARGISNFN

AT4G29035.1 Plant self-incompatibility protein S1 family9.1e-1031.96Show/hide
Query:  KYYVHIINGFKDA-MIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKREACGDGHCRWKADARGISNFN
        ++ V + NG      + +HCKSK+NDLG+  +     F WNF  N    TLF+C++  ++G++  K +WD +      C   +C W A   G+  +N
Subjt:  KYYVHIINGFKDA-MIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKREACGDGHCRWKADARGISNFN

AT5G12060.1 Plant self-incompatibility protein S1 family1.8e-1029.5Show/hide
Query:  IHKSCILLLVICICLNTQLSQVSG--EISLFDKYYVHIINGFKDAM-IGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAY
        I K+ + ++VI + +    SQV    +++      V I N   D + + +HCKS D+DLG + +   G + + FRT+  G TLF+CH  W      +  Y
Subjt:  IHKSCILLLVICICLNTQLSQVSG--EISLFDKYYVHIINGFKDAM-IGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAY

Query:  WDNEEFKREACGDGHCRWKADARGISNFNLSDAFFDKYY
         D+ +  R      +C W    +G   F+ SD  F+  Y
Subjt:  WDNEEFKREACGDGHCRWKADARGISNFNLSDAFFDKYY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCATCCACAAGAGCTGCATTCTCTTGCTTGTAATATGCATTTGTTTGAACACTCAACTTTCACAAGTGAGCGGTGAAATATCGTTGTTCGATAAGTATTACGTTCA
TATCATCAACGGCTTCAAAGACGCGATGATCGGAGTTCATTGCAAGTCAAAAGACAATGATTTGGGCGAACAATACGTCCCGGTTGGGGGCGAATTCCAATGGAATTTTC
GAACAAACTTCTTTGGGAGGACGTTGTTCTTTTGTCATGTTTGGTGGAATGAAGGATACATAACGTATAAGGCGTATTGGGATAACGAAGAGTTTAAGAGAGAAGCATGT
GGAGATGGACATTGTAGATGGAAAGCTGATGCTCGGGGAATTTCTAATTTTAATTTGAGCGATGCATTTTTCGATAAATATTACGTTAACATCATCAATGACTTCGATAA
CATGACAATTGAAGCCCATTGCAGGTCGAAAGATAACGATCTCGGCAACAATTTCATCCCGATAAGGATTGAAGGGCACATTACATATCAGGCCTATTGGCATGAGGATA
ACTTTGAGAGAGATGTATGTGGAGATGGACATTGCAGATGGAAAGCAAATGCTCAGGGAATTTCTAGTTTCAATGTTGGCCAAAATGTGTATCAATTAAAATTCAAATGG
GAACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCATCCACAAGAGCTGCATTCTCTTGCTTGTAATATGCATTTGTTTGAACACTCAACTTTCACAAGTGAGCGGTGAAATATCGTTGTTCGATAAGTATTACGTTCA
TATCATCAACGGCTTCAAAGACGCGATGATCGGAGTTCATTGCAAGTCAAAAGACAATGATTTGGGCGAACAATACGTCCCGGTTGGGGGCGAATTCCAATGGAATTTTC
GAACAAACTTCTTTGGGAGGACGTTGTTCTTTTGTCATGTTTGGTGGAATGAAGGATACATAACGTATAAGGCGTATTGGGATAACGAAGAGTTTAAGAGAGAAGCATGT
GGAGATGGACATTGTAGATGGAAAGCTGATGCTCGGGGAATTTCTAATTTTAATTTGAGCGATGCATTTTTCGATAAATATTACGTTAACATCATCAATGACTTCGATAA
CATGACAATTGAAGCCCATTGCAGGTCGAAAGATAACGATCTCGGCAACAATTTCATCCCGATAAGGATTGAAGGGCACATTACATATCAGGCCTATTGGCATGAGGATA
ACTTTGAGAGAGATGTATGTGGAGATGGACATTGCAGATGGAAAGCAAATGCTCAGGGAATTTCTAGTTTCAATGTTGGCCAAAATGTGTATCAATTAAAATTCAAATGG
GAACATTGA
Protein sequenceShow/hide protein sequence
MGIHKSCILLLVICICLNTQLSQVSGEISLFDKYYVHIINGFKDAMIGVHCKSKDNDLGEQYVPVGGEFQWNFRTNFFGRTLFFCHVWWNEGYITYKAYWDNEEFKREAC
GDGHCRWKADARGISNFNLSDAFFDKYYVNIINDFDNMTIEAHCRSKDNDLGNNFIPIRIEGHITYQAYWHEDNFERDVCGDGHCRWKANAQGISSFNVGQNVYQLKFKW
EH