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Lsi02G020470 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G020470
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-protein homolog
Genome locationchr02:26606260..26609248
RNA-Seq ExpressionLsi02G020470
SyntenyLsi02G020470
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV63841.1 Self-incomp_S1 domain-containing protein, partial [Cephalotus follicularis]4.6e-3334.74Show/hide
Query:  FDKYYVHIING-FDNMMIGAHCRSKDNDLGNHFIPIKGEYQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHEDDFERDVCGDGHCRWKADAQGTELIQV
        F KY+V I N    N  +  HC+S+D+DLG H +     Y + FR N FGTTLF+C++W+ + H+ + A+  +D+F    CGD +C W+A   G  L   
Subjt:  FDKYYVHIING-FDNMMIGAHCRSKDNDLGNHFIPIKGEYQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHEDDFERDVCGDGHCRWKADAQGTELIQV

Query:  SNAEKYYVHIINGFKNAMVGAHCRSKDDDLG-NQYIPVGGEFQWHFRSNFFGTTLYFCHIWWMEGHITYRVYWHDDDFERTLCGDGHCRWKADPEGISNY
           E    +   G  +  +  HC+S+DDDLG +     G  +++ F  NF+ TTL+FC+ WW + H  + V+   D F    CG   C W+A  +GI  +
Subjt:  SNAEKYYVHIINGFKNAMVGAHCRSKDDDLG-NQYIPVGGEFQWHFRSNFFGTTLYFCHIWWMEGHITYRVYWHDDDFERTLCGDGHCRWKADPEGISNY

Query:  NVKKGFYELQFKW
        N       L+++W
Subjt:  NVKKGFYELQFKW

GAV70659.1 Self-incomp_S1 domain-containing protein, partial [Cephalotus follicularis]4.7e-3033.02Show/hide
Query:  KYYVHIINGFD-NMMIGAHCRSKDNDLGNHFIPIKGE-YQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHEDDFERDVCGDGHCRWKADAQGTEL---I
        KY+V ++N    N  +  HC+S D+D+G H +P  G+ Y++ F  N FGTTLF+C++W+ +  + + A+  ++ F    CGD  C W+A   G  L   +
Subjt:  KYYVHIINGFD-NMMIGAHCRSKDNDLGNHFIPIKGE-YQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHEDDFERDVCGDGHCRWKADAQGTEL---I

Query:  QVSNAEKYYVHIINGFKNAMVGAHCRSKDDDLGNQYIPVGGE-FQWHFRSNFFGTTLYFCHIWWMEGHITYRVYWHDDDFERTLCGDGHCRWKADPEGIS
           +  KY         N  +  HC+S DDDLG   +P  G+ +++ F  NFFGTTL+FC++W+   H+ +  +   + F    CG+  C W+A  +GI 
Subjt:  QVSNAEKYYVHIINGFKNAMVGAHCRSKDDDLGNQYIPVGGE-FQWHFRSNFFGTTLYFCHIWWMEGHITYRVYWHDDDFERTLCGDGHCRWKADPEGIS

Query:  NYNVKKGFYELQFKW
         +N        ++KW
Subjt:  NYNVKKGFYELQFKW

KAA0050599.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]1.8e-5379.34Show/hide
Query:  MGIHKSYIILLVISISLSTELTQLSDAFFDKYYVHIINGFDNMMIGAHCRSKDNDLGNHFIPIKGEYQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHE
        MG  KS+IILLVIS +LSTELTQ+S+AFFDK+YVHIINGFDN  IGAHCRSKD+DL N FIP+ GE+QWHFRTN FGTTLFYCH+WWI G ITY+AYWHE
Subjt:  MGIHKSYIILLVISISLSTELTQLSDAFFDKYYVHIINGFDNMMIGAHCRSKDNDLGNHFIPIKGEYQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHE

Query:  DDFERDVCGDGHCRWKADAQG
        +DFE  VCGDGHCRWKAD QG
Subjt:  DDFERDVCGDGHCRWKADAQG

KAE8646226.1 hypothetical protein Csa_016670 [Cucumis sativus]5.7e-6849.64Show/hide
Query:  MGIHKSYIILLVISISLSTELTQLSDAFFDKYYVHIINGFDNMMIGAHCRSKDNDLGNHFIPIKGEYQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHE
        MGI KSYIILLVISI+LS ELTQ+S A F+K+YVHIINGFDN  IGAHCRSKD+DLGN FIP+  E+ W+FRTN  GTTLFYCH+WWI GHITY+AYWHE
Subjt:  MGIHKSYIILLVISISLSTELTQLSDAFFDKYYVHIINGFDNMMIGAHCRSKDNDLGNHFIPIKGEYQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHE

Query:  DDFERDVCGDGHCRWKADAQGTELIQVSNAE---------------------------KYYVHIINGFKNAMVG--AHCRSKDDDLGNQYIPVGGEFQWH
        +DFE   CGDGHCRWKAD QG     V                               +++V +IN   NA  G   HCRS+DDDLG Q +P      W 
Subjt:  DDFERDVCGDGHCRWKADAQGTELIQVSNAE---------------------------KYYVHIINGFKNAMVG--AHCRSKDDDLGNQYIPVGGEFQWH

Query:  FRSNFFGTTLYFCHIWWMEG------HITYRVYWHDDD-FERTLCGDGHCRWKADPEGISNYNVKKGFYELQFKWE
        F +NFF +TL++C +    G         ++V+WHD   F++  CG  +C W A  +GI   N  K   +L + WE
Subjt:  FRSNFFGTTLYFCHIWWMEG------HITYRVYWHDDD-FERTLCGDGHCRWKADPEGISNYNVKKGFYELQFKWE

XP_031745088.1 S-protein homolog 3-like [Cucumis sativus]1.7e-5176.86Show/hide
Query:  MGIHKSYIILLVISISLSTELTQLSDAFFDKYYVHIINGFDNMMIGAHCRSKDNDLGNHFIPIKGEYQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHE
        MGI KSYIILLVISI+LS ELTQ+S A F+K+YVHIINGFDN  IGAHCRSKD+DLGN FIP+  E+ W+FRTN  GTTLFYCH+WWI GHITY+AYWHE
Subjt:  MGIHKSYIILLVISISLSTELTQLSDAFFDKYYVHIINGFDNMMIGAHCRSKDNDLGNHFIPIKGEYQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHE

Query:  DDFERDVCGDGHCRWKADAQG
        +DFE   CGDGHCRWKAD QG
Subjt:  DDFERDVCGDGHCRWKADAQG

TrEMBL top hitse value%identityAlignment
A0A0A0K4G8 S-protein homolog8.1e-5276.86Show/hide
Query:  MGIHKSYIILLVISISLSTELTQLSDAFFDKYYVHIINGFDNMMIGAHCRSKDNDLGNHFIPIKGEYQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHE
        MGI KSYIILLVISI+LS ELTQ+S A F+K+YVHIINGFDN  IGAHCRSKD+DLGN FIP+  E+ W+FRTN  GTTLFYCH+WWI GHITY+AYWHE
Subjt:  MGIHKSYIILLVISISLSTELTQLSDAFFDKYYVHIINGFDNMMIGAHCRSKDNDLGNHFIPIKGEYQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHE

Query:  DDFERDVCGDGHCRWKADAQG
        +DFE   CGDGHCRWKAD QG
Subjt:  DDFERDVCGDGHCRWKADAQG

A0A1Q3B732 S-protein homolog (Fragment)2.2e-3334.74Show/hide
Query:  FDKYYVHIING-FDNMMIGAHCRSKDNDLGNHFIPIKGEYQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHEDDFERDVCGDGHCRWKADAQGTELIQV
        F KY+V I N    N  +  HC+S+D+DLG H +     Y + FR N FGTTLF+C++W+ + H+ + A+  +D+F    CGD +C W+A   G  L   
Subjt:  FDKYYVHIING-FDNMMIGAHCRSKDNDLGNHFIPIKGEYQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHEDDFERDVCGDGHCRWKADAQGTELIQV

Query:  SNAEKYYVHIINGFKNAMVGAHCRSKDDDLG-NQYIPVGGEFQWHFRSNFFGTTLYFCHIWWMEGHITYRVYWHDDDFERTLCGDGHCRWKADPEGISNY
           E    +   G  +  +  HC+S+DDDLG +     G  +++ F  NF+ TTL+FC+ WW + H  + V+   D F    CG   C W+A  +GI  +
Subjt:  SNAEKYYVHIINGFKNAMVGAHCRSKDDDLG-NQYIPVGGEFQWHFRSNFFGTTLYFCHIWWMEGHITYRVYWHDDDFERTLCGDGHCRWKADPEGISNY

Query:  NVKKGFYELQFKW
        N       L+++W
Subjt:  NVKKGFYELQFKW

A0A1Q3BRX6 S-protein homolog (Fragment)2.3e-3033.02Show/hide
Query:  KYYVHIINGFD-NMMIGAHCRSKDNDLGNHFIPIKGE-YQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHEDDFERDVCGDGHCRWKADAQGTEL---I
        KY+V ++N    N  +  HC+S D+D+G H +P  G+ Y++ F  N FGTTLF+C++W+ +  + + A+  ++ F    CGD  C W+A   G  L   +
Subjt:  KYYVHIINGFD-NMMIGAHCRSKDNDLGNHFIPIKGE-YQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHEDDFERDVCGDGHCRWKADAQGTEL---I

Query:  QVSNAEKYYVHIINGFKNAMVGAHCRSKDDDLGNQYIPVGGE-FQWHFRSNFFGTTLYFCHIWWMEGHITYRVYWHDDDFERTLCGDGHCRWKADPEGIS
           +  KY         N  +  HC+S DDDLG   +P  G+ +++ F  NFFGTTL+FC++W+   H+ +  +   + F    CG+  C W+A  +GI 
Subjt:  QVSNAEKYYVHIINGFKNAMVGAHCRSKDDDLGNQYIPVGGE-FQWHFRSNFFGTTLYFCHIWWMEGHITYRVYWHDDDFERTLCGDGHCRWKADPEGIS

Query:  NYNVKKGFYELQFKW
         +N        ++KW
Subjt:  NYNVKKGFYELQFKW

A0A5A7UAS5 S-protein homolog8.6e-5479.34Show/hide
Query:  MGIHKSYIILLVISISLSTELTQLSDAFFDKYYVHIINGFDNMMIGAHCRSKDNDLGNHFIPIKGEYQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHE
        MG  KS+IILLVIS +LSTELTQ+S+AFFDK+YVHIINGFDN  IGAHCRSKD+DL N FIP+ GE+QWHFRTN FGTTLFYCH+WWI G ITY+AYWHE
Subjt:  MGIHKSYIILLVISISLSTELTQLSDAFFDKYYVHIINGFDNMMIGAHCRSKDNDLGNHFIPIKGEYQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHE

Query:  DDFERDVCGDGHCRWKADAQG
        +DFE  VCGDGHCRWKAD QG
Subjt:  DDFERDVCGDGHCRWKADAQG

A0A5N6QIK7 S-protein homolog8.1e-2852.73Show/hide
Query:  EKYYVHIINGFKNAMVGAHCRSKDDDLGNQYIPVGGEFQWHFRSNFFGTTLYFCHIWWMEGHITYRVYWHDDDFERTLCGDGHCRWKADPEGISNYNVKK
        +KY V I NGF+N  +   C+S+DDDLG Q+IPV GEFQWHFR N++GTTLYFC++WW  GH    V+W D+ F    CGD  CRW    +GI  Y  K 
Subjt:  EKYYVHIINGFKNAMVGAHCRSKDDDLGNQYIPVGGEFQWHFRSNFFGTTLYFCHIWWMEGHITYRVYWHDDDFERTLCGDGHCRWKADPEGISNYNVKK

Query:  GFYELQFKWE
          Y LQ +WE
Subjt:  GFYELQFKWE

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 24.3e-1034.78Show/hide
Query:  HCRSKDDDLGNQYIPVGGEFQWHFRSNFFGTTLYFCHIWWMEGHITYRVYW-HDDDFERTLCGDGHCRWKADPEGISNYNVKKGFYELQFKW
        HC+SKDDDLGN+ +  G  + + F   FFG TLYFC   W     ++ +Y  H D      C    C WK    G   +N +   ++L + W
Subjt:  HCRSKDDDLGNQYIPVGGEFQWHFRSNFFGTTLYFCHIWWMEGHITYRVYW-HDDDFERTLCGDGHCRWKADPEGISNYNVKKGFYELQFKW

F4JLS0 S-protein homolog 11.3e-1131.67Show/hide
Query:  TELIQVSNAEKYYVHIINGFKNA-MVGAHCRSKDDDLGNQYIPVGGEFQWHFRSNFFGTTLYFCHIWWMEGHITYRVYWHDDDFERTLCGDGHCRWKADP
        T  I V    ++ V ++NG      +  HC+SK+DDLG   +     F W+F  N   +T ++C++    GH+   V+W DD      CG  +C W A  
Subjt:  TELIQVSNAEKYYVHIINGFKNA-MVGAHCRSKDDDLGNQYIPVGGEFQWHFRSNFFGTTLYFCHIWWMEGHITYRVYWHDDDFERTLCGDGHCRWKADP

Query:  EGISNYNVKKGFYELQFKWE
        +G+  +N   G   L  KWE
Subjt:  EGISNYNVKKGFYELQFKWE

O23020 S-protein homolog 54.0e-0838.16Show/hide
Query:  HCRSKDNDLGNHFIPIKGEYQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHEDDFERD--VCGDGHCRWKADAQG
        HC+SK +DLG H +P K EY + F+ NL+ +TLF+C   W     ++  Y    D +RD  +C D  C+W+    G
Subjt:  HCRSKDNDLGNHFIPIKGEYQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHEDDFERD--VCGDGHCRWKADAQG

P0DN92 S-protein homolog 241.1e-0837.21Show/hide
Query:  MVGAHCRSKDDDLGNQYIPVGGEFQWHFRSNFFGTTLYFCHIWWMEGHI---TYRVYWHDDDFERTLCGDGHCRWKADPEGISNYN
        ++G HC+S+DDDLG   +  G  F W F  NF  +TLYFC   + +G +    + +Y  + DF R      +C WKA+ +GI  Y+
Subjt:  MVGAHCRSKDDDLGNQYIPVGGEFQWHFRSNFFGTTLYFCHIWWMEGHI---TYRVYWHDDDFERTLCGDGHCRWKADPEGISNYN

Q9FMQ4 S-protein homolog 34.8e-0932.17Show/hide
Query:  IILLVISISLSTELTQLSDAFFDKYYVHIINGF-DNMMIGAHCRSKDNDLGNHFIPIKGEYQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHEDDFERD
        +I L+I I+ S   T     +     V I N   D + +  HC+S D+DLG   +   G + + FRT++ GTTLFYCH  W      +  Y  + D  R 
Subjt:  IILLVISISLSTELTQLSDAFFDKYYVHIINGF-DNMMIGAHCRSKDNDLGNHFIPIKGEYQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHEDDFERD

Query:  VCGDGHCRWKADAQG
             +C W    QG
Subjt:  VCGDGHCRWKADAQG

Arabidopsis top hitse value%identityAlignment
AT3G16970.1 Plant self-incompatibility protein S1 family3.4e-1031.87Show/hide
Query:  HCRSKDDDLGNQYIPVGGEFQWHFRSNFFGTTLYFCHIWWMEGHITYRVYWHDDDFERTLCGDGHCRWKADPEGISNYNVKKGFYELQFKW
        HC+SK+DDLG++ + V G + + FR + FG TL+FC   W +    + +Y    D E    G   C WK   +G    N     +++   W
Subjt:  HCRSKDDDLGNQYIPVGGEFQWHFRSNFFGTTLYFCHIWWMEGHITYRVYWHDDDFERTLCGDGHCRWKADPEGISNYNVKKGFYELQFKW

AT3G17080.1 Plant self-incompatibility protein S1 family1.3e-0932.26Show/hide
Query:  HCRSKDDDLGNQYIPVGGEFQWHFRSNFFGTTLYFCHI-WWMEGHITYRVYWHDDDFERTLCGDGHCRWKADPEGISNYNVKKGFYELQFKWE
        HC+S++DDLG Q +  G  + + F  + FG TL++C   W  E HI + +Y    D E    G   C WK    G   +  K G ++  + W+
Subjt:  HCRSKDDDLGNQYIPVGGEFQWHFRSNFFGTTLYFCHI-WWMEGHITYRVYWHDDDFERTLCGDGHCRWKADPEGISNYNVKKGFYELQFKWE

AT4G16195.1 Plant self-incompatibility protein S1 family3.1e-1134.78Show/hide
Query:  HCRSKDDDLGNQYIPVGGEFQWHFRSNFFGTTLYFCHIWWMEGHITYRVYW-HDDDFERTLCGDGHCRWKADPEGISNYNVKKGFYELQFKW
        HC+SKDDDLGN+ +  G  + + F   FFG TLYFC   W     ++ +Y  H D      C    C WK    G   +N +   ++L + W
Subjt:  HCRSKDDDLGNQYIPVGGEFQWHFRSNFFGTTLYFCHIWWMEGHITYRVYW-HDDDFERTLCGDGHCRWKADPEGISNYNVKKGFYELQFKW

AT4G16295.1 S-protein homologue 19.5e-1331.67Show/hide
Query:  TELIQVSNAEKYYVHIINGFKNA-MVGAHCRSKDDDLGNQYIPVGGEFQWHFRSNFFGTTLYFCHIWWMEGHITYRVYWHDDDFERTLCGDGHCRWKADP
        T  I V    ++ V ++NG      +  HC+SK+DDLG   +     F W+F  N   +T ++C++    GH+   V+W DD      CG  +C W A  
Subjt:  TELIQVSNAEKYYVHIINGFKNA-MVGAHCRSKDDDLGNQYIPVGGEFQWHFRSNFFGTTLYFCHIWWMEGHITYRVYWHDDDFERTLCGDGHCRWKADP

Query:  EGISNYNVKKGFYELQFKWE
        +G+  +N   G   L  KWE
Subjt:  EGISNYNVKKGFYELQFKWE

AT5G12060.1 Plant self-incompatibility protein S1 family3.4e-1032.17Show/hide
Query:  IILLVISISLSTELTQLSDAFFDKYYVHIINGF-DNMMIGAHCRSKDNDLGNHFIPIKGEYQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHEDDFERD
        +I L+I I+ S   T     +     V I N   D + +  HC+S D+DLG   +   G + + FRT++ GTTLFYCH  W      +  Y  + D  R 
Subjt:  IILLVISISLSTELTQLSDAFFDKYYVHIINGF-DNMMIGAHCRSKDNDLGNHFIPIKGEYQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHEDDFERD

Query:  VCGDGHCRWKADAQG
             +C W    QG
Subjt:  VCGDGHCRWKADAQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCATCCACAAGAGCTACATTATCTTGCTTGTGATATCCATTTCTTTGAGCACAGAACTAACACAGTTGAGCGATGCATTTTTCGATAAATATTATGTTCACATCAT
CAATGGTTTTGATAACATGATGATTGGAGCTCATTGCAGGTCGAAAGACAACGATCTGGGCAACCATTTCATCCCGATAAAGGGCGAGTACCAATGGCATTTCCGAACAA
ACTTGTTCGGGACGACACTGTTCTATTGTCATATTTGGTGGATTGAAGGGCACATTACATATCAGGCTTATTGGCATGAGGATGACTTTGAGAGAGATGTATGTGGAGAT
GGACATTGCAGATGGAAAGCAGATGCTCAGGGCACTGAACTAATACAAGTGAGCAATGCAGAAAAGTATTATGTTCACATCATCAATGGGTTTAAGAATGCAATGGTCGG
AGCTCATTGTAGGTCAAAAGACGACGATCTCGGGAACCAATACATCCCGGTCGGGGGTGAGTTCCAGTGGCATTTTCGATCCAACTTCTTCGGGACGACGTTGTACTTCT
GTCATATTTGGTGGATGGAAGGACACATTACGTATCGAGTGTATTGGCACGACGACGATTTTGAGAGGACACTATGTGGAGATGGACATTGCAGATGGAAAGCAGATCCT
GAGGGAATTTCTAATTACAATGTTAAGAAAGGTTTCTATGAATTGCAATTTAAATGGGAACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCATCCACAAGAGCTACATTATCTTGCTTGTGATATCCATTTCTTTGAGCACAGAACTAACACAGTTGAGCGATGCATTTTTCGATAAATATTATGTTCACATCAT
CAATGGTTTTGATAACATGATGATTGGAGCTCATTGCAGGTCGAAAGACAACGATCTGGGCAACCATTTCATCCCGATAAAGGGCGAGTACCAATGGCATTTCCGAACAA
ACTTGTTCGGGACGACACTGTTCTATTGTCATATTTGGTGGATTGAAGGGCACATTACATATCAGGCTTATTGGCATGAGGATGACTTTGAGAGAGATGTATGTGGAGAT
GGACATTGCAGATGGAAAGCAGATGCTCAGGGCACTGAACTAATACAAGTGAGCAATGCAGAAAAGTATTATGTTCACATCATCAATGGGTTTAAGAATGCAATGGTCGG
AGCTCATTGTAGGTCAAAAGACGACGATCTCGGGAACCAATACATCCCGGTCGGGGGTGAGTTCCAGTGGCATTTTCGATCCAACTTCTTCGGGACGACGTTGTACTTCT
GTCATATTTGGTGGATGGAAGGACACATTACGTATCGAGTGTATTGGCACGACGACGATTTTGAGAGGACACTATGTGGAGATGGACATTGCAGATGGAAAGCAGATCCT
GAGGGAATTTCTAATTACAATGTTAAGAAAGGTTTCTATGAATTGCAATTTAAATGGGAACATTGA
Protein sequenceShow/hide protein sequence
MGIHKSYIILLVISISLSTELTQLSDAFFDKYYVHIINGFDNMMIGAHCRSKDNDLGNHFIPIKGEYQWHFRTNLFGTTLFYCHIWWIEGHITYQAYWHEDDFERDVCGD
GHCRWKADAQGTELIQVSNAEKYYVHIINGFKNAMVGAHCRSKDDDLGNQYIPVGGEFQWHFRSNFFGTTLYFCHIWWMEGHITYRVYWHDDDFERTLCGDGHCRWKADP
EGISNYNVKKGFYELQFKWEH