; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G020480 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G020480
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-protein homolog
Genome locationchr02:26637097..26637522
RNA-Seq ExpressionLsi02G020480
SyntenyLsi02G020480
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050661.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]2.2e-5670.34Show/hide
Query:  MMMRNVVVLWLVTTTLVMADRDPW--------SYDIYIVNGLSNVEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESF
        MMMRNVVVLWL T  LV  +   W         Y +++VNGLS   + VHCQSK+DDLGYHHLVN GD Y W+F EN WGTTLFWC+LEKPDAYV+FESF
Subjt:  MMMRNVVVLWLVTTTLVMADRDPW--------SYDIYIVNGLSNVEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESF

Query:  WPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWI
        WPE+KN WLR RCG QG CIWTAKDDGIYLRN P NVDEFVHKWI
Subjt:  WPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWI

XP_004139726.1 S-protein homolog 74-like [Cucumis sativus]2.3e-5366.9Show/hide
Query:  MMRNVVVLWLVTTTLVMADR---------DPWSYDIYIVNGLSNVEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESF
        M+RNVVV W  T  LV ADR         +P  Y +++VNGLSN ++ VHCQSKD+DLGY HL+N GD++ W+F  N +GTTLFWCKLEK DAYVSFESF
Subjt:  MMRNVVVLWLVTTTLVMADR---------DPWSYDIYIVNGLSNVEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESF

Query:  WPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWI
        WPES+N WLR RCG QG+CIWTAKDDGIYLRNNP NVDE+VHKW+
Subjt:  WPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWI

XP_016903452.1 PREDICTED: uncharacterized protein LOC103503421 [Cucumis melo]1.9e-5568.97Show/hide
Query:  MMMRNVVVLWLVTTTLVMADRDPWS--------YDIYIVNGLSNVEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESF
        MMMRNVVVLWL    LV      WS        Y +++VNGLS   + VHCQSKDDDLGYH LV  GD + W+F ENFWGTTLFWC+LEKPDAYV+FESF
Subjt:  MMMRNVVVLWLVTTTLVMADRDPWS--------YDIYIVNGLSNVEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESF

Query:  WPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWI
        WPE+KN WLR+RCG QG CIWTAKDDGIYLRN P N DEFVHKWI
Subjt:  WPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWI

XP_038896423.1 S-protein homolog 1-like [Benincasa hispida]7.5e-6075.34Show/hide
Query:  MRNVVVLWLVTTTLVMADRDPWS--------YDIYIVNGLSNVEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESFWP
        MRNVVVLWL T  LV A    WS        Y +++VNGLSN +MVVHCQSKDDDLGYHHLVN GD+Y W+F ENFWGTTLFWCKLEKP+AYVSFESFWP
Subjt:  MRNVVVLWLVTTTLVMADRDPWS--------YDIYIVNGLSNVEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESFWP

Query:  ES-KNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWIST
        ES KNTWLR RCG QG CIWTAKDDGIYLRN P NVDEFVHKW+ T
Subjt:  ES-KNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWIST

XP_038896433.1 S-protein homolog 1-like [Benincasa hispida]4.1e-5872.67Show/hide
Query:  MMMMRNVVVLWLVTTTLVMADR---------DPWSYDIYIVNGLSNVEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFE
        M+  RNV+ LWL+T  LV AD+             Y I+IVNGLS  +MVVHCQSKDDDLGYHHLVN GD+Y W+F+ NFW TTLFWCKLEKPDAYVSFE
Subjt:  MMMMRNVVVLWLVTTTLVMADR---------DPWSYDIYIVNGLSNVEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFE

Query:  SFWPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWISTR
         FWPESK+TWLR RCG QG CIWTAKDDGIYLRN PANVDEFVHKWISTR
Subjt:  SFWPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWISTR

TrEMBL top hitse value%identityAlignment
A0A1S4E5F6 S-protein homolog9.2e-5668.97Show/hide
Query:  MMMRNVVVLWLVTTTLVMADRDPWS--------YDIYIVNGLSNVEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESF
        MMMRNVVVLWL    LV      WS        Y +++VNGLS   + VHCQSKDDDLGYH LV  GD + W+F ENFWGTTLFWC+LEKPDAYV+FESF
Subjt:  MMMRNVVVLWLVTTTLVMADRDPWS--------YDIYIVNGLSNVEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESF

Query:  WPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWI
        WPE+KN WLR+RCG QG CIWTAKDDGIYLRN P N DEFVHKWI
Subjt:  WPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWI

A0A5A7SNG3 S-protein homolog4.3e-5367.36Show/hide
Query:  NVVVLWLVTTTLVMA--------DRDPWSYDIYIVNGLSNVEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESFWPES
        NV+VL LV    V A              Y I+++NGLSN +++VHCQSKDDDLGYHHL N GD+Y W+F ENFW TTLFWCKLEK +A+VSFESFWPES
Subjt:  NVVVLWLVTTTLVMA--------DRDPWSYDIYIVNGLSNVEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESFWPES

Query:  KNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWISTR
        K+TWLR RCG QG CIWTAKDDGIYLRN PAN+DEFVHKWI T+
Subjt:  KNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWISTR

A0A5A7U930 S-protein homolog1.1e-5369.86Show/hide
Query:  MMMRNVVVLWLVTTTLVMADRDPWS--------YDIYIVNGLSNVEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESF
        MMMRNVVVLWL T  LV      WS        Y +++VNGLS   + VHCQSKDDDLGYH LVN GD++ W+F ENFWGTTLFWC+LEK DAYV+FESF
Subjt:  MMMRNVVVLWLVTTTLVMADRDPWS--------YDIYIVNGLSNVEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESF

Query:  WPESKNTWLRYRCGRQ-GDCIWTAKDDGIYLRNNPANVDEFVHKWI
        WPES+N WLRYRCG Q G CIWTAKDDGIYLRN   NVDEFVHKWI
Subjt:  WPESKNTWLRYRCGRQ-GDCIWTAKDDGIYLRNNPANVDEFVHKWI

A0A5A7UAS6 S-protein homolog1.1e-5670.34Show/hide
Query:  MMMRNVVVLWLVTTTLVMADRDPW--------SYDIYIVNGLSNVEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESF
        MMMRNVVVLWL T  LV  +   W         Y +++VNGLS   + VHCQSK+DDLGYHHLVN GD Y W+F EN WGTTLFWC+LEKPDAYV+FESF
Subjt:  MMMRNVVVLWLVTTTLVMADRDPW--------SYDIYIVNGLSNVEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESF

Query:  WPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWI
        WPE+KN WLR RCG QG CIWTAKDDGIYLRN P NVDEFVHKWI
Subjt:  WPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWI

A0A5D3DIG9 S-protein homolog9.2e-5668.97Show/hide
Query:  MMMRNVVVLWLVTTTLVMADRDPWS--------YDIYIVNGLSNVEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESF
        MMMRNVVVLWL    LV      WS        Y +++VNGLS   + VHCQSKDDDLGYH LV  GD + W+F ENFWGTTLFWC+LEKPDAYV+FESF
Subjt:  MMMRNVVVLWLVTTTLVMADRDPWS--------YDIYIVNGLSNVEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESF

Query:  WPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWI
        WPE+KN WLR+RCG QG CIWTAKDDGIYLRN P N DEFVHKWI
Subjt:  WPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWI

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 68.1e-0929.9Show/hide
Query:  VHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESFWPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWI
        VHC+S+DDD G+ H++  G  Y W F  NF  +TL++C   +          +   +++       R  +C W AK+DGIY        +   +KW+
Subjt:  VHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESFWPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWI

F4JLQ5 S-protein homolog 21.8e-0826.35Show/hide
Query:  VVLWLVTTTLVMAD--------RDPWSYD---------IYIVNGLSN-VEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVS
        +++  +TT L  AD         DP S +         + I N L N + ++ HC+SKDDDLG +  + PG+++ +SF   F+G TL++C    P+   S
Subjt:  VVLWLVTTTLVMAD--------RDPWSYD---------IYIVNGLSN-VEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVS

Query:  FESFWPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKW
        F+  + + +++    +C     C+W  + +G    N+     +  + W
Subjt:  FESFWPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKW

F4JLS0 S-protein homolog 12.8e-1735.34Show/hide
Query:  NVVVLWLVTTTLVMADRDPWSYDIYIVNGLSNVE-MVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESFWPESKNTWLRY
        +V+V    T  +++     W   + +VNGL+  E + +HC+SK+DDLG  +L    + + W+F EN   +T FWC + K + +++   FW +     L +
Subjt:  NVVVLWLVTTTLVMADRDPWSYDIYIVNGLSNVE-MVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESFWPESKNTWLRY

Query:  RCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKW
        RCG + +CIWTAK DG+YL N+ +  D    KW
Subjt:  RCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKW

Q2HQ46 S-protein homolog 743.6e-1737.72Show/hide
Query:  YDIYIVNGLSNVE-MVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESFWPESKNTWLRYRCGRQGDCIWTAKDDGIYLRN
        + + + NGL+  E + +HC+SK++DLG  +L    D + W+F EN   +TLFWC + K D +++ + FW +     L +RC  + +C+WTAK+DG+YL N
Subjt:  YDIYIVNGLSNVE-MVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESFWPESKNTWLRYRCGRQGDCIWTAKDDGIYLRN

Query:  NPANVDEFVHKWIS
        +    D    KW S
Subjt:  NPANVDEFVHKWIS

Q9FI84 S-protein homolog 271.1e-0834.69Show/hide
Query:  VHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEK-PDAYVSFESFWPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWI
        +HC+SKDDDLG+ H+   G+ Y W F  NF  +TL++C   +  D    F+    E       YRC    +C W AK D +Y  +N      +  KW+
Subjt:  VHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEK-PDAYVSFESFWPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWI

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family1.3e-0926.35Show/hide
Query:  VVLWLVTTTLVMAD--------RDPWSYD---------IYIVNGLSN-VEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVS
        +++  +TT L  AD         DP S +         + I N L N + ++ HC+SKDDDLG +  + PG+++ +SF   F+G TL++C    P+   S
Subjt:  VVLWLVTTTLVMAD--------RDPWSYD---------IYIVNGLSN-VEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVS

Query:  FESFWPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKW
        F+  + + +++    +C     C+W  + +G    N+     +  + W
Subjt:  FESFWPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKW

AT4G16295.1 S-protein homologue 12.0e-1835.34Show/hide
Query:  NVVVLWLVTTTLVMADRDPWSYDIYIVNGLSNVE-MVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESFWPESKNTWLRY
        +V+V    T  +++     W   + +VNGL+  E + +HC+SK+DDLG  +L    + + W+F EN   +T FWC + K + +++   FW +     L +
Subjt:  NVVVLWLVTTTLVMADRDPWSYDIYIVNGLSNVE-MVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESFWPESKNTWLRY

Query:  RCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKW
        RCG + +CIWTAK DG+YL N+ +  D    KW
Subjt:  RCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKW

AT4G29035.1 Plant self-incompatibility protein S1 family2.6e-1837.72Show/hide
Query:  YDIYIVNGLSNVE-MVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESFWPESKNTWLRYRCGRQGDCIWTAKDDGIYLRN
        + + + NGL+  E + +HC+SK++DLG  +L    D + W+F EN   +TLFWC + K D +++ + FW +     L +RC  + +C+WTAK+DG+YL N
Subjt:  YDIYIVNGLSNVE-MVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESFWPESKNTWLRYRCGRQGDCIWTAKDDGIYLRN

Query:  NPANVDEFVHKWIS
        +    D    KW S
Subjt:  NPANVDEFVHKWIS

AT5G04350.1 Plant self-incompatibility protein S1 family8.9e-1131.68Show/hide
Query:  IYIVNGLSNVEMV-VHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEK-PD-----AYVSFESFWPESKNTWLRYRCGRQGDCIWTAKDDGI
        + + N L + +++ VHC+SKDDDLG  H++  G +Y ++F +N W TT F C++++ P+      +V++E+ W ++           +  C W  ++DGI
Subjt:  IYIVNGLSNVEMV-VHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEK-PD-----AYVSFESFWPESKNTWLRYRCGRQGDCIWTAKDDGI

Query:  Y
        Y
Subjt:  Y

AT5G06020.1 Plant self-incompatibility protein S1 family7.5e-1034.69Show/hide
Query:  VHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEK-PDAYVSFESFWPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWI
        +HC+SKDDDLG+ H+   G+ Y W F  NF  +TL++C   +  D    F+    E       YRC    +C W AK D +Y  +N      +  KW+
Subjt:  VHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEK-PDAYVSFESFWPESKNTWLRYRCGRQGDCIWTAKDDGIYLRNNPANVDEFVHKWI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGATGAGGAATGTGGTTGTTTTGTGGCTCGTGACAACGACTTTGGTCATGGCTGATCGAGATCCTTGGAGCTACGATATTTACATCGTAAACGGGCTAAGCAA
CGTCGAAATGGTTGTGCACTGCCAATCCAAAGACGATGATTTGGGGTATCACCATTTGGTTAATCCTGGAGATAATTACCATTGGTCTTTTAGCGAGAACTTTTGGGGAA
CAACCTTGTTTTGGTGCAAATTGGAGAAGCCGGATGCGTACGTCTCTTTTGAAAGCTTTTGGCCTGAGTCCAAGAACACTTGGCTTCGTTATAGGTGTGGGCGTCAAGGA
GATTGTATTTGGACCGCTAAAGATGATGGAATTTACTTGAGAAACAATCCTGCTAATGTTGATGAGTTTGTTCACAAATGGATCTCTACTAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGATGATGAGGAATGTGGTTGTTTTGTGGCTCGTGACAACGACTTTGGTCATGGCTGATCGAGATCCTTGGAGCTACGATATTTACATCGTAAACGGGCTAAGCAA
CGTCGAAATGGTTGTGCACTGCCAATCCAAAGACGATGATTTGGGGTATCACCATTTGGTTAATCCTGGAGATAATTACCATTGGTCTTTTAGCGAGAACTTTTGGGGAA
CAACCTTGTTTTGGTGCAAATTGGAGAAGCCGGATGCGTACGTCTCTTTTGAAAGCTTTTGGCCTGAGTCCAAGAACACTTGGCTTCGTTATAGGTGTGGGCGTCAAGGA
GATTGTATTTGGACCGCTAAAGATGATGGAATTTACTTGAGAAACAATCCTGCTAATGTTGATGAGTTTGTTCACAAATGGATCTCTACTAGATAA
Protein sequenceShow/hide protein sequence
MMMMRNVVVLWLVTTTLVMADRDPWSYDIYIVNGLSNVEMVVHCQSKDDDLGYHHLVNPGDNYHWSFSENFWGTTLFWCKLEKPDAYVSFESFWPESKNTWLRYRCGRQG
DCIWTAKDDGIYLRNNPANVDEFVHKWISTR