; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G020490 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G020490
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-protein homolog
Genome locationchr02:26652134..26652583
RNA-Seq ExpressionLsi02G020490
SyntenyLsi02G020490
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026247.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]4.9e-6274.48Show/hide
Query:  NVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPE
        NV+VL LVM   V A ++LR+ LPP    RYY+H++NGLSN D++VHCQSKD+DLGYHHL NRGDDYQWNF  N W TTLFWCKLEK +A+VSFESFWPE
Subjt:  NVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPE

Query:  SKNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWISTR
        SK+TWLRDRCG QGTCIWTAKDDGIYLRN PA +DEFVHKWI T+
Subjt:  SKNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWISTR

KAA0050661.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]5.5e-6173.29Show/hide
Query:  MMMRNVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFES
        MMMRNVVVLWL    LV   ++ +   PP KP RY+VH++NGLS   + VHCQSK++DLGYHHLVNRGD+YQWNF  N+WGTTLFWC+LEKP AYV+FES
Subjt:  MMMRNVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFES

Query:  FWPESKNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWI
        FWPE+KN WLRDRCG+QGTCIWTAKDDGIYLRN P  VDEFVHKWI
Subjt:  FWPESKNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWI

XP_004139726.1 S-protein homolog 74-like [Cucumis sativus]4.5e-6374.48Show/hide
Query:  MMRNVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESF
        M+RNVVV W     LVGA +I R P  P  P RYYVH++NGLSN D+ VHCQSKDNDLGY HL+NRGDD+QWNF VN++GTTLFWCKLEK  AYVSFESF
Subjt:  MMRNVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESF

Query:  WPESKNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWI
        WPES+N WLRDRCG QG CIWTAKDDGIYLRNNP  VDE+VHKW+
Subjt:  WPESKNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWI

XP_038896423.1 S-protein homolog 1-like [Benincasa hispida]1.8e-6781.63Show/hide
Query:  MRNVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFW
        MRNVVVLWL    LVGA QI R  +PP +P RYYVH++NGLSN DMVVHCQSKD+DLGYHHLVNRGDDYQWNF  N WGTTLFWCKLEKP+AYVSFESFW
Subjt:  MRNVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFW

Query:  PES-KNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWIST
        PES KNTWLRDRCG+QGTCIWTAKDDGIYLRN P  VDEFVHKW+ T
Subjt:  PES-KNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWIST

XP_038896433.1 S-protein homolog 1-like [Benincasa hispida]3.5e-6879.87Show/hide
Query:  MMMRNVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFES
        +  RNV+ LWL+   LVGA QILRL LPP    RYY+HI+NGLS  DMVVHCQSKD+DLGYHHLVN GDDYQWNF VN W TTLFWCKLEKP AYVSFE 
Subjt:  MMMRNVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFES

Query:  FWPESKNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWISTR
        FWPESK+TWLRDRCG+QGTCIWTAKDDGIYLRN PA VDEFVHKWISTR
Subjt:  FWPESKNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWISTR

TrEMBL top hitse value%identityAlignment
A0A1S3C8C8 S-protein homolog1.4e-5975.97Show/hide
Query:  QILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTC
        ++LR+ LPP    RYY+H++NGLSN D++VHCQSKD+DLGYHHL NRGDDYQWNF  N W TTLFWCKLEK + +VSFESFWPESK+TWLRDRCG QGTC
Subjt:  QILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTC

Query:  IWTAKDDGIYLRNNPAKVDEFVHKWISTR
        IWTAKDDGIYLRN PA +DEFVHKWI T+
Subjt:  IWTAKDDGIYLRNNPAKVDEFVHKWISTR

A0A1S4E5F6 S-protein homolog2.7e-5870.55Show/hide
Query:  MMMRNVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFES
        MMMRNVVVLWL M  LV   Q+ +   PP  P RY+VH++NGLS   + VHCQSKD+DLGYH LV +GD++QWNF  N WGTTLFWC+LEKP AYV+FES
Subjt:  MMMRNVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFES

Query:  FWPESKNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWI
        FWPE+KN WLR RCG+QGTCIWTAKDDGIYLRN P   DEFVHKWI
Subjt:  FWPESKNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWI

A0A5A7SNG3 S-protein homolog2.4e-6274.48Show/hide
Query:  NVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPE
        NV+VL LVM   V A ++LR+ LPP    RYY+H++NGLSN D++VHCQSKD+DLGYHHL NRGDDYQWNF  N W TTLFWCKLEK +A+VSFESFWPE
Subjt:  NVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPE

Query:  SKNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWISTR
        SK+TWLRDRCG QGTCIWTAKDDGIYLRN PA +DEFVHKWI T+
Subjt:  SKNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWISTR

A0A5A7UAS6 S-protein homolog2.6e-6173.29Show/hide
Query:  MMMRNVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFES
        MMMRNVVVLWL    LV   ++ +   PP KP RY+VH++NGLS   + VHCQSK++DLGYHHLVNRGD+YQWNF  N+WGTTLFWC+LEKP AYV+FES
Subjt:  MMMRNVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFES

Query:  FWPESKNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWI
        FWPE+KN WLRDRCG+QGTCIWTAKDDGIYLRN P  VDEFVHKWI
Subjt:  FWPESKNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWI

A0A5D3DIG9 S-protein homolog2.7e-5870.55Show/hide
Query:  MMMRNVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFES
        MMMRNVVVLWL M  LV   Q+ +   PP  P RY+VH++NGLS   + VHCQSKD+DLGYH LV +GD++QWNF  N WGTTLFWC+LEKP AYV+FES
Subjt:  MMMRNVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFES

Query:  FWPESKNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWI
        FWPE+KN WLR RCG+QGTCIWTAKDDGIYLRN P   DEFVHKWI
Subjt:  FWPESKNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWI

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 63.9e-0926.95Show/hide
Query:  VVLWLVMTTLVGAHQILR-LPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPES
        +++++V+ +L+G   +     + P K     V I N  ++  + VHC+S+D+D G+ H++ +G  Y W F VN   +TL++C   +          +   
Subjt:  VVLWLVMTTLVGAHQILR-LPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPES

Query:  KNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWI
        +++    RC +   C W AK+DGIY      K +   +KW+
Subjt:  KNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWI

F4JLS0 S-protein homolog 11.9e-1637.07Show/hide
Query:  KPERYYVHIINGLSNVD-MVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTCIWTAKDDGI
        K   + V ++NGL+  + + +HC+SK++DLG  +L  R + + WNF  N+  +T FWC + K + +++   FW +     L  RCG +  CIWTAK DG+
Subjt:  KPERYYVHIINGLSNVD-MVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTCIWTAKDDGI

Query:  YLRNNPAKVDEFVHKW
        YL N+ +  D    KW
Subjt:  YLRNNPAKVDEFVHKW

P0DN92 S-protein homolog 242.3e-0630.86Show/hide
Query:  VHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTCIWTAKDDGIY
        +HC+S+D+DLG+ H++ +G+ + W F VN   +TL++C   +          +  +++ +   RC +   C W A+ DGIY
Subjt:  VHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTCIWTAKDDGIY

Q2HQ46 S-protein homolog 747.3e-1637.29Show/hide
Query:  KPERYYVHIINGLSNVD-MVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTCIWTAKDDGI
        K   + V + NGL+  + + +HC+SK+NDLG  +L    D + WNF  N+  +TLFWC + K   +++ + FW +     L  RC  +  C+WTAK+DG+
Subjt:  KPERYYVHIINGLSNVD-MVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTCIWTAKDDGI

Query:  YLRNNPAKVDEFVHKWIS
        YL N+    D    KW S
Subjt:  YLRNNPAKVDEFVHKWIS

Q9LW22 S-protein homolog 219.5e-0837.21Show/hide
Query:  VHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWP-ESKNTWLRDRCGSQGTCIWTAKDDGIYLRNN
        VHC+SK+ND+G  +L   G+   ++F  N WGTT FWC L K   Y  +      ++   + +D  GS     W A+DDGIY   +
Subjt:  VHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWP-ESKNTWLRDRCGSQGTCIWTAKDDGIYLRNN

Arabidopsis top hitse value%identityAlignment
AT1G28305.1 Plant self-incompatibility protein S1 family4.2e-1134.51Show/hide
Query:  VHIINGL----SNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTCIWTAKDDGIYLR
        +HI N L     + D+ V C+S   D+G H+ V  G  YQ++   N W TTLFWC       Y + + F         +      GT  WTA++DGIY R
Subjt:  VHIINGL----SNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTCIWTAKDDGIYLR

Query:  NNPAKVDEFVHKW
         N   + + VH W
Subjt:  NNPAKVDEFVHKW

AT3G24060.1 Plant self-incompatibility protein S1 family4.0e-0928.37Show/hide
Query:  MMMRNVVVLWLVMTTLVGAHQILRLPLPPTK---PERYYVHIINGL---SNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWG-TTLFWCKLEKPH
        M  R  ++L L M   +    I  L L P      E + V +IN     S++ +V+ C S   DLG   L   GDD++W   +++W     + C ++   
Subjt:  MMMRNVVVLWLVMTTLVGAHQILRLPLPPTK---PERYYVHIINGL---SNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWG-TTLFWCKLEKPH

Query:  AYVSFESFWPESKNTWLRDRCGSQGTCIWTAKDDGIYLRNN
            FE+F    K +   +RCGS   C W+ ++DG Y  ++
Subjt:  AYVSFESFWPESKNTWLRDRCGSQGTCIWTAKDDGIYLRNN

AT4G16295.1 S-protein homologue 11.4e-1737.07Show/hide
Query:  KPERYYVHIINGLSNVD-MVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTCIWTAKDDGI
        K   + V ++NGL+  + + +HC+SK++DLG  +L  R + + WNF  N+  +T FWC + K + +++   FW +     L  RCG +  CIWTAK DG+
Subjt:  KPERYYVHIINGLSNVD-MVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTCIWTAKDDGI

Query:  YLRNNPAKVDEFVHKW
        YL N+ +  D    KW
Subjt:  YLRNNPAKVDEFVHKW

AT4G29035.1 Plant self-incompatibility protein S1 family5.2e-1737.29Show/hide
Query:  KPERYYVHIINGLSNVD-MVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTCIWTAKDDGI
        K   + V + NGL+  + + +HC+SK+NDLG  +L    D + WNF  N+  +TLFWC + K   +++ + FW +     L  RC  +  C+WTAK+DG+
Subjt:  KPERYYVHIINGLSNVD-MVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTCIWTAKDDGI

Query:  YLRNNPAKVDEFVHKWIS
        YL N+    D    KW S
Subjt:  YLRNNPAKVDEFVHKWIS

AT5G04350.1 Plant self-incompatibility protein S1 family1.6e-1035.63Show/hide
Query:  VHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLE-----KPHA-YVSFESFWPESKNTWLRDRCGSQGTCIWTAKDDGIY
        VHC+SKD+DLG  H++  G DY++ F  N+W TT F C+++     K H  +V++E+ W ++           + +C W  ++DGIY
Subjt:  VHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLE-----KPHA-YVSFESFWPESKNTWLRDRCGSQGTCIWTAKDDGIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGAGGAATGTGGTTGTTTTGTGGCTCGTGATGACGACTTTGGTCGGGGCTCATCAGATTCTTAGGTTGCCATTACCGCCAACAAAGCCTGAAAGGTACTATGT
TCACATCATAAATGGGCTAAGCAACGTTGATATGGTTGTGCACTGCCAATCCAAGGACAATGATTTGGGGTATCACCATTTGGTTAATCGTGGAGATGATTACCAATGGA
ATTTTATCGTGAATGTTTGGGGAACAACCTTGTTTTGGTGCAAATTGGAGAAGCCACATGCGTATGTCTCTTTTGAAAGCTTTTGGCCTGAGTCCAAGAACACTTGGCTC
CGTGATAGGTGTGGGAGTCAAGGAACTTGTATTTGGACCGCTAAAGATGATGGAATTTACTTGAGAAATAATCCTGCTAAGGTTGATGAGTTTGTTCACAAATGGATCTC
TACTAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGATGAGGAATGTGGTTGTTTTGTGGCTCGTGATGACGACTTTGGTCGGGGCTCATCAGATTCTTAGGTTGCCATTACCGCCAACAAAGCCTGAAAGGTACTATGT
TCACATCATAAATGGGCTAAGCAACGTTGATATGGTTGTGCACTGCCAATCCAAGGACAATGATTTGGGGTATCACCATTTGGTTAATCGTGGAGATGATTACCAATGGA
ATTTTATCGTGAATGTTTGGGGAACAACCTTGTTTTGGTGCAAATTGGAGAAGCCACATGCGTATGTCTCTTTTGAAAGCTTTTGGCCTGAGTCCAAGAACACTTGGCTC
CGTGATAGGTGTGGGAGTCAAGGAACTTGTATTTGGACCGCTAAAGATGATGGAATTTACTTGAGAAATAATCCTGCTAAGGTTGATGAGTTTGTTCACAAATGGATCTC
TACTAGATAA
Protein sequenceShow/hide protein sequence
MMMRNVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWL
RDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWISTR