; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G020500 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G020500
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-protein homolog
Genome locationchr02:26654382..26654831
RNA-Seq ExpressionLsi02G020500
SyntenyLsi02G020500
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067970.1 uncharacterized protein E6C27_scaffold138G001560 [Cucumis melo var. makuwa]3.2e-4181.91Show/hide
Query:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPWNKI
        S DDDLG H L +KGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVE +HPWL SRCF  +CIWIAKDD +YLRNN  NVDER+H WNKI
Subjt:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPWNKI

XP_004139722.1 S-protein homolog 1-like [Cucumis sativus]9.0e-3675.79Show/hide
Query:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPWNKIA
        S DDDLG   L  +G EF WTF+V+ FG TLFWCYL+KPNFSVSFESFWVE  H WL SRC+DKNCIWIAKDDGIYLRNNP N+DERVH WNK+A
Subjt:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPWNKIA

XP_008461539.1 PREDICTED: uncharacterized protein LOC103500111 [Cucumis melo]2.1e-4588.3Show/hide
Query:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPWNKI
        S DDDLGNHTLSTKG+E QWTFKVNFFGTTLFWCYL+KPNF V+FESFWVE THPWL SRCFDKNCIWIAKDDGIYLRNN TNVDE VHPWNK+
Subjt:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPWNKI

XP_008462114.1 PREDICTED: uncharacterized protein LOC103500542 [Cucumis melo]3.4e-3576.6Show/hide
Query:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPWNKI
        S DDDLG   L  KG EF WTF+V+ FG TLFWCYL+KPNFSVSFESFWVE  H WL SRC+DKNCIWIAKDDGIYLRNNP N++ERVH WNKI
Subjt:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPWNKI

XP_022143645.1 S-protein homolog 1-like [Momordica charantia]6.9e-3674.73Show/hide
Query:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPW
        S DDDLG H L T+G+EFQWTF+VNF+ TTL+WCYL+KPN  VSFESFWVE TH WL  RC DKNCIW AKDDGIYLRNNP  VDER+H W
Subjt:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPW

TrEMBL top hitse value%identityAlignment
A0A1S3CEQ0 S-protein homolog1.0e-4588.3Show/hide
Query:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPWNKI
        S DDDLGNHTLSTKG+E QWTFKVNFFGTTLFWCYL+KPNF V+FESFWVE THPWL SRCFDKNCIWIAKDDGIYLRNN TNVDE VHPWNK+
Subjt:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPWNKI

A0A1S3CG89 S-protein homolog1.7e-3576.6Show/hide
Query:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPWNKI
        S DDDLG   L  KG EF WTF+V+ FG TLFWCYL+KPNFSVSFESFWVE  H WL SRC+DKNCIWIAKDDGIYLRNNP N++ERVH WNKI
Subjt:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPWNKI

A0A5A7VL75 S-protein homolog1.6e-4181.91Show/hide
Query:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPWNKI
        S DDDLG H L +KGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVE +HPWL SRCF  +CIWIAKDD +YLRNN  NVDER+H WNKI
Subjt:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPWNKI

A0A6J1CPC6 S-protein homolog3.3e-3674.73Show/hide
Query:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPW
        S DDDLG H L T+G+EFQWTF+VNF+ TTL+WCYL+KPN  VSFESFWVE TH WL  RC DKNCIW AKDDGIYLRNNP  VDER+H W
Subjt:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPW

A0A6J1L0E8 S-protein homolog5.5e-3167.03Show/hide
Query:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPW
        S DDDLG H L   G EFQW+FK N + TTLFWC L+KPN  VSFE+FW+E TH WL  RC+ +NCIW AKDDG+YLRNNP  VDERVH W
Subjt:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPW

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 21.3e-0834.34Show/hide
Query:  MTYSC---DDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPWNK
        + Y C   DDDLGN TL   GE + ++F   FFG TL++C    PN S SF+  + +       ++C    C+W  + +G    N+ T   +  +PWNK
Subjt:  MTYSC---DDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPWNK

F4JLS0 S-protein homolog 11.2e-1139.56Show/hide
Query:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPW
        S +DDLG   L  +   F W F  N   +T FWCY+ K N  ++   FW +     L  RC  KNCIW AK DG+YL N+ +  D     W
Subjt:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPW

P0DN92 S-protein homolog 246.6e-0541.77Show/hide
Query:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVS-FESFWVESTHPWLASRCFDK--NCIWIAKDDGIY
        S DDDLG H L+ KGE F W F VNF  +TL++C   +       FE +         A+R F +  NC W A+ DGIY
Subjt:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVS-FESFWVESTHPWLASRCFDK--NCIWIAKDDGIY

P0DN93 S-protein homolog 292.9e-0531.63Show/hide
Query:  MTYSC---DDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPWN
        +T SC   DDDLG H L   G+ F W F+ ++F TTLF C     N    F+++  +         C+  +C W    D   +  N     +R +PWN
Subjt:  MTYSC---DDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPWN

Q2HQ46 S-protein homolog 748.0e-1137.36Show/hide
Query:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPW
        S ++DLG+  L    + F W F  N   +TLFWCY+ K +  ++ + FW +     L  RC  KNC+W AK+DG+YL N+    D     W
Subjt:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPW

Arabidopsis top hitse value%identityAlignment
AT4G10895.1 Plant self-incompatibility protein S1 family6.1e-0639.71Show/hide
Query:  TLFWCYLQK-PNFS--VSFESF-WVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPWNK
        TL WC L K P+F   VSF++F   ES    +        C W  +DDG++ RNNPT   + ++ WNK
Subjt:  TLFWCYLQK-PNFS--VSFESF-WVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPWNK

AT4G16195.1 Plant self-incompatibility protein S1 family9.1e-1034.34Show/hide
Query:  MTYSC---DDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPWNK
        + Y C   DDDLGN TL   GE + ++F   FFG TL++C    PN S SF+  + +       ++C    C+W  + +G    N+ T   +  +PWNK
Subjt:  MTYSC---DDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPWNK

AT4G16295.1 S-protein homologue 18.8e-1339.56Show/hide
Query:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPW
        S +DDLG   L  +   F W F  N   +T FWCY+ K N  ++   FW +     L  RC  KNCIW AK DG+YL N+ +  D     W
Subjt:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPW

AT4G29035.1 Plant self-incompatibility protein S1 family5.7e-1237.36Show/hide
Query:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPW
        S ++DLG+  L    + F W F  N   +TLFWCY+ K +  ++ + FW +     L  RC  KNC+W AK+DG+YL N+    D     W
Subjt:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPTNVDERVHPW

AT5G04350.1 Plant self-incompatibility protein S1 family1.4e-0737.8Show/hide
Query:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYL-QKPNFS-----VSFESFWVESTHPWLASRCFDKNCIWIAKDDGIY
        S DDDLG H L   G+++++TF  N + TT F C + Q PNF      V++E+ W         S+  + +C WI ++DGIY
Subjt:  SCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYL-QKPNFS-----VSFESFWVESTHPWLASRCFDKNCIWIAKDDGIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAAAAAAACATTTGATAGTGATTCTTTTACTTGTGTTGGCGGTTGTGGCAGTGGTCCAGCCGTGCACGGCGATTCCATTGCCACTCCCAACATGACATATTCATG
TGACGATGATTTGGGAAACCACACTTTGAGTACCAAAGGAGAGGAATTCCAATGGACTTTTAAGGTCAACTTTTTTGGAACAACGTTGTTTTGGTGCTACCTGCAGAAGC
CAAATTTTAGCGTATCATTCGAATCTTTTTGGGTTGAAAGCACTCACCCTTGGCTCGCTTCTAGGTGCTTTGATAAAAATTGCATTTGGATTGCTAAAGATGATGGAATT
TACTTAAGAAACAATCCTACTAATGTTGATGAACGTGTACATCCATGGAACAAAATTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATAAAAAAAACATTTGATAGTGATTCTTTTACTTGTGTTGGCGGTTGTGGCAGTGGTCCAGCCGTGCACGGCGATTCCATTGCCACTCCCAACATGACATATTCATG
TGACGATGATTTGGGAAACCACACTTTGAGTACCAAAGGAGAGGAATTCCAATGGACTTTTAAGGTCAACTTTTTTGGAACAACGTTGTTTTGGTGCTACCTGCAGAAGC
CAAATTTTAGCGTATCATTCGAATCTTTTTGGGTTGAAAGCACTCACCCTTGGCTCGCTTCTAGGTGCTTTGATAAAAATTGCATTTGGATTGCTAAAGATGATGGAATT
TACTTAAGAAACAATCCTACTAATGTTGATGAACGTGTACATCCATGGAACAAAATTGCTTGA
Protein sequenceShow/hide protein sequence
MIKKTFDSDSFTCVGGCGSGPAVHGDSIATPNMTYSCDDDLGNHTLSTKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVESTHPWLASRCFDKNCIWIAKDDGI
YLRNNPTNVDERVHPWNKIA