; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G020510 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G020510
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-protein homolog
Genome locationchr02:26667199..26667654
RNA-Seq ExpressionLsi02G020510
SyntenyLsi02G020510
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067970.1 uncharacterized protein E6C27_scaffold138G001560 [Cucumis melo var. makuwa]6.1e-6879.59Show/hide
Query:  MYEEKKHLAMVLLLVVAAMAVFQPCTTVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVSFEA
        MYEEK +L +V+LLV+ A+AV QPCT VPLPLP W IHVVNGLNNETLLVHCKSKDDDLG H+L +KGEEFQWTFKVNFFGTTLFWCYLQKPNF+VSFE+
Subjt:  MYEEKKHLAMVLLLVVAAMAVFQPCTTVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVSFEA

Query:  FWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQWNKI
        FWVE +HPWL+SRCF  +CIWIAKDD +YLRNN  NVDER+H+WNKI
Subjt:  FWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQWNKI

KAE8646232.1 hypothetical protein Csa_016625, partial [Cucumis sativus]4.0e-5170.63Show/hide
Query:  MGTMYEEKKHLAMV-LLLVVAAMAVFQPCTTVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNV
        +GTM     HLA+V LL+V+ AM V QPC  VP+P P WHIHVVNGL+NETLLVHCKS DDDLG   L  +G EF WTF+V+ FG TLFWCYL+KPNF+V
Subjt:  MGTMYEEKKHLAMV-LLLVVAAMAVFQPCTTVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNV

Query:  SFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDE
        SFE+FWVE  H WL+SRC+DKNCIWIAKDDGIYLRNNP N+DE
Subjt:  SFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDE

XP_004139722.1 S-protein homolog 1-like [Cucumis sativus]1.4e-5673.43Show/hide
Query:  HLAMV-LLLVVAAMAVFQPCTTVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVSFEAFWVES
        HLA+V LL+V+ AM V QPC  VP+P P WHIHVVNGL+NETLLVHCKS DDDLG   L  +G EF WTF+V+ FG TLFWCYL+KPNF+VSFE+FWVE 
Subjt:  HLAMV-LLLVVAAMAVFQPCTTVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVSFEAFWVES

Query:  THPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQWNKIA
         H WL+SRC+DKNCIWIAKDDGIYLRNNP N+DERVH WNK+A
Subjt:  THPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQWNKIA

XP_008461539.1 PREDICTED: uncharacterized protein LOC103500111 [Cucumis melo]9.7e-6678.23Show/hide
Query:  MYEEKKHLAMVLLLVVAAMAVFQPCTTVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVSFEA
        MYE+   LAM LLLV+ A+ + QP T VPLPLP WHIHVVNGL N+TL VHCKSKDDDLGNH+L+ KG+E QWTFKVNFFGTTLFWCYL+KPNF V+FE+
Subjt:  MYEEKKHLAMVLLLVVAAMAVFQPCTTVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVSFEA

Query:  FWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQWNKI
        FWVE THPWL+SRCFDKNCIWIAKDDGIYLRNN TNVDE VH WNK+
Subjt:  FWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQWNKI

XP_008462114.1 PREDICTED: uncharacterized protein LOC103500542 [Cucumis melo]3.4e-5872.67Show/hide
Query:  MGTMYEEKKHLAMVLLLVVAAMAVFQPCTTVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVS
        MGT+     HLA+V LLV+ AM V QPCT VP+P P WHIHVVNGL+NETLLVHCKS+DDDLG   L  KG EF WTF+V+ FG TLFWCYL+KPNF+VS
Subjt:  MGTMYEEKKHLAMVLLLVVAAMAVFQPCTTVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVS

Query:  FEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQWNKI
        FE+FWVE  H WL+SRC+DKNCIWIAKDDGIYLRNNP N++ERVH WNKI
Subjt:  FEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQWNKI

TrEMBL top hitse value%identityAlignment
A0A1S3CEQ0 S-protein homolog4.7e-6678.23Show/hide
Query:  MYEEKKHLAMVLLLVVAAMAVFQPCTTVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVSFEA
        MYE+   LAM LLLV+ A+ + QP T VPLPLP WHIHVVNGL N+TL VHCKSKDDDLGNH+L+ KG+E QWTFKVNFFGTTLFWCYL+KPNF V+FE+
Subjt:  MYEEKKHLAMVLLLVVAAMAVFQPCTTVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVSFEA

Query:  FWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQWNKI
        FWVE THPWL+SRCFDKNCIWIAKDDGIYLRNN TNVDE VH WNK+
Subjt:  FWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQWNKI

A0A1S3CG89 S-protein homolog1.6e-5872.67Show/hide
Query:  MGTMYEEKKHLAMVLLLVVAAMAVFQPCTTVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVS
        MGT+     HLA+V LLV+ AM V QPCT VP+P P WHIHVVNGL+NETLLVHCKS+DDDLG   L  KG EF WTF+V+ FG TLFWCYL+KPNF+VS
Subjt:  MGTMYEEKKHLAMVLLLVVAAMAVFQPCTTVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVS

Query:  FEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQWNKI
        FE+FWVE  H WL+SRC+DKNCIWIAKDDGIYLRNNP N++ERVH WNKI
Subjt:  FEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQWNKI

A0A5A7VL75 S-protein homolog3.0e-6879.59Show/hide
Query:  MYEEKKHLAMVLLLVVAAMAVFQPCTTVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVSFEA
        MYEEK +L +V+LLV+ A+AV QPCT VPLPLP W IHVVNGLNNETLLVHCKSKDDDLG H+L +KGEEFQWTFKVNFFGTTLFWCYLQKPNF+VSFE+
Subjt:  MYEEKKHLAMVLLLVVAAMAVFQPCTTVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVSFEA

Query:  FWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQWNKI
        FWVE +HPWL+SRCF  +CIWIAKDD +YLRNN  NVDER+H+WNKI
Subjt:  FWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQWNKI

A0A6J1CPC6 S-protein homolog4.3e-5163.95Show/hide
Query:  MYEEKKHLAMVLLLVVAAMAVFQPCTTVPLP---LPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVS
        MY + + + +V+ LV    AV Q  T   L    LP WHIHVVNGL+  TL VHCKSKDDDLG H+L  +G+EFQWTF+VNF+ TTL+WCYL+KPN +VS
Subjt:  MYEEKKHLAMVLLLVVAAMAVFQPCTTVPLP---LPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVS

Query:  FEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQW
        FE+FWVE TH WL  RC DKNCIW AKDDGIYLRNNP  VDER+H+W
Subjt:  FEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQW

A0A6J1L0E8 S-protein homolog1.4e-4660Show/hide
Query:  MGTMYEEKKHL-AMVLLLVVAAMAVFQPCTTV--PLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNF
        M + Y +K+HL A   LL + A A+ QP       +P+  W +HVVN LNN TL VHCKSKDDDLG H+L   G EFQW+FK N + TTLFWC L+KPN 
Subjt:  MGTMYEEKKHL-AMVLLLVVAAMAVFQPCTTV--PLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNF

Query:  NVSFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQW
         VSFEAFW+E TH WL+ RC+ +NCIW AKDDG+YLRNNP  VDERVH+W
Subjt:  NVSFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQW

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 22.9e-1229.49Show/hide
Query:  KKHLAMVLLLVVAAMAVFQPCTTVPLPLPT-------------WHIHVVNGLNNE-TLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQ
        K++L++ +L++     + Q      +P+P                + + N L N+ TLL HCKSKDDDLGN +L   GE + ++F   FFG TL++C   
Subjt:  KKHLAMVLLLVVAAMAVFQPCTTVPLPLPT-------------WHIHVVNGLNNE-TLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQ

Query:  KPNFNVSFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQWNK
         PN + SF+  + +       ++C    C+W  + +G    N+ T   +  + WNK
Subjt:  KPNFNVSFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQWNK

F4JLS0 S-protein homolog 13.4e-2144.14Show/hide
Query:  WHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVSFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNN
        W + VVNGL   ETL +HCKSK+DDLG  +L  +   F W F  N   +T FWCY+ K N +++   FW +     L  RC  KNCIW AK DG+YL N+
Subjt:  WHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVSFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNN

Query:  PTNVDERVHQW
         +  D    +W
Subjt:  PTNVDERVHQW

P0DN92 S-protein homolog 241.8e-0943.68Show/hide
Query:  NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVS-FEAFWVESTHPWLSSRCFDKNCIWIAKDDGIY
        N+  L +HCKS+DDDLG H L AKGE F W F VNF  +TL++C   +       FE +           RC   NC W A+ DGIY
Subjt:  NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVS-FEAFWVESTHPWLSSRCFDKNCIWIAKDDGIY

Q2HQ46 S-protein homolog 747.1e-1936.17Show/hide
Query:  LAMVLLLVVAAMAVFQPCTTVPLPLP---TWHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVSFEAFWV
        +   L+L      + +  TT  + +P    W + V NGL   ETL +HCKSK++DLG+ +L    + F W F  N   +TLFWCY+ K + +++ + FW 
Subjt:  LAMVLLLVVAAMAVFQPCTTVPLPLP---TWHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVSFEAFWV

Query:  ESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQW
        +     L  RC  KNC+W AK+DG+YL N+    D    +W
Subjt:  ESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQW

Q9FI83 S-protein homolog 286.0e-1041.11Show/hide
Query:  VNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVSFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIY
        +   N+  L +HCKS+DDDLG H L AKGE F W F VNF  +TL +C   +   N      +V S   +   RC   NC W A+ DG +
Subjt:  VNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVSFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIY

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family2.1e-1329.49Show/hide
Query:  KKHLAMVLLLVVAAMAVFQPCTTVPLPLPT-------------WHIHVVNGLNNE-TLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQ
        K++L++ +L++     + Q      +P+P                + + N L N+ TLL HCKSKDDDLGN +L   GE + ++F   FFG TL++C   
Subjt:  KKHLAMVLLLVVAAMAVFQPCTTVPLPLPT-------------WHIHVVNGLNNE-TLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQ

Query:  KPNFNVSFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQWNK
         PN + SF+  + +       ++C    C+W  + +G    N+ T   +  + WNK
Subjt:  KPNFNVSFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQWNK

AT4G16295.1 S-protein homologue 12.4e-2244.14Show/hide
Query:  WHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVSFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNN
        W + VVNGL   ETL +HCKSK+DDLG  +L  +   F W F  N   +T FWCY+ K N +++   FW +     L  RC  KNCIW AK DG+YL N+
Subjt:  WHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVSFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNN

Query:  PTNVDERVHQW
         +  D    +W
Subjt:  PTNVDERVHQW

AT4G29035.1 Plant self-incompatibility protein S1 family5.0e-2036.17Show/hide
Query:  LAMVLLLVVAAMAVFQPCTTVPLPLP---TWHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVSFEAFWV
        +   L+L      + +  TT  + +P    W + V NGL   ETL +HCKSK++DLG+ +L    + F W F  N   +TLFWCY+ K + +++ + FW 
Subjt:  LAMVLLLVVAAMAVFQPCTTVPLPLP---TWHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVSFEAFWV

Query:  ESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQW
        +     L  RC  KNC+W AK+DG+YL N+    D    +W
Subjt:  ESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQW

AT5G04347.1 Plant self-incompatibility protein S1 family6.0e-1337.72Show/hide
Query:  VVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQK-PNF--NVSFEAF---WVESTHPWLSSRCFDKNCIWIAKDDGIYLRN
        V N LNN+ L V C+SKDD+LG+H L   G+  +  F  N +  TLFWC L K P+F  +V+F+A+   W     P           +WIA++DGIY   
Subjt:  VVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQK-PNF--NVSFEAF---WVESTHPWLSSRCFDKNCIWIAKDDGIYLRN

Query:  NPTNVDERVHQWNK
        +P    ++ + W K
Subjt:  NPTNVDERVHQWNK

AT5G06020.1 Plant self-incompatibility protein S1 family3.6e-1034.04Show/hide
Query:  LAMVLLLVVAAMAVFQPCTTVPLPLPTWHIHVVNGLNNETLL-VHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVS-FEAFWVES
        + +V++ V       Q     P+  P   I V N  NN+ LL +HCKSKDDDLG H +  +GE + W F VNF  +TL++C   +   N   F+    E 
Subjt:  LAMVLLLVVAAMAVFQPCTTVPLPLPTWHIHVVNGLNNETLL-VHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVS-FEAFWVES

Query:  THPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQWNK
               RC  +NC W AK D +Y  +N         +W K
Subjt:  THPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQWNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAACAATGTATGAAGAAAAGAAGCATTTGGCAATGGTTCTTTTACTTGTGGTGGCGGCTATGGCAGTGTTCCAGCCATGCACGACGGTTCCACTGCCACTCCCAAC
ATGGCACATTCATGTGGTAAATGGGCTGAACAATGAAACCCTATTGGTTCATTGTAAGTCTAAAGATGATGATTTGGGAAATCATAGTTTGGCTGCCAAAGGAGAAGAAT
TCCAATGGACTTTTAAGGTCAATTTTTTTGGAACAACGTTGTTTTGGTGCTACTTGCAAAAACCAAATTTTAACGTATCATTTGAAGCTTTTTGGGTTGAAAGCACTCAC
CCTTGGCTCAGTTCGAGGTGCTTTGACAAAAATTGCATTTGGATTGCTAAAGATGATGGAATTTACTTGAGAAACAATCCTACTAACGTTGATGAACGTGTACATCAGTG
GAACAAAATTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAACAATGTATGAAGAAAAGAAGCATTTGGCAATGGTTCTTTTACTTGTGGTGGCGGCTATGGCAGTGTTCCAGCCATGCACGACGGTTCCACTGCCACTCCCAAC
ATGGCACATTCATGTGGTAAATGGGCTGAACAATGAAACCCTATTGGTTCATTGTAAGTCTAAAGATGATGATTTGGGAAATCATAGTTTGGCTGCCAAAGGAGAAGAAT
TCCAATGGACTTTTAAGGTCAATTTTTTTGGAACAACGTTGTTTTGGTGCTACTTGCAAAAACCAAATTTTAACGTATCATTTGAAGCTTTTTGGGTTGAAAGCACTCAC
CCTTGGCTCAGTTCGAGGTGCTTTGACAAAAATTGCATTTGGATTGCTAAAGATGATGGAATTTACTTGAGAAACAATCCTACTAACGTTGATGAACGTGTACATCAGTG
GAACAAAATTGCTTGA
Protein sequenceShow/hide protein sequence
MGTMYEEKKHLAMVLLLVVAAMAVFQPCTTVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNVSFEAFWVESTH
PWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDERVHQWNKIA