; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G020520 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G020520
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-protein homolog
Genome locationchr02:26670582..26671028
RNA-Seq ExpressionLsi02G020520
SyntenyLsi02G020520
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067970.1 uncharacterized protein E6C27_scaffold138G001560 [Cucumis melo var. makuwa]6.0e-6881.08Show/hide
Query:  MYEEKKHLEVVLLLVVAAVVVVQPCTAVPLPLPRWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEA
        MYEEK +L VV+LLV+ AV VVQPCTAVPLPLP+W IHVVNGLNNETLLVHCKSKDDDLG H+L +KGEEFQWTFKVNFFGTTLFWCYLQK NF+VSFE+
Subjt:  MYEEKKHLEVVLLLVVAAVVVVQPCTAVPLPLPRWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEA

Query:  FWVESTHPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKIV
        FWVE +HPWLNSRCF  +CIWIAKDD +YLRNN  NVDE +H+WNKIV
Subjt:  FWVESTHPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKIV

KAE8646232.1 hypothetical protein Csa_016625, partial [Cucumis sativus]2.3e-5174.63Show/hide
Query:  HLEVV-LLLVVAAVVVVQPCTAVPLPLPRWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVES
        HL VV LL+V+ A++VVQPC AVP+P PRWHIHVVNGL+NETLLVHCKS DDDLG   L  +G EF WTF+V+ FG TLFWCYL+K NF+VSFE+FWVE 
Subjt:  HLEVV-LLLVVAAVVVVQPCTAVPLPLPRWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVES

Query:  THPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDE
         H WLNSRC+DKNCIWIAKDDGIYLRNNP N+DE
Subjt:  THPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDE

XP_004139722.1 S-protein homolog 1-like [Cucumis sativus]2.0e-5573.94Show/hide
Query:  HLEVV-LLLVVAAVVVVQPCTAVPLPLPRWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVES
        HL VV LL+V+ A++VVQPC AVP+P PRWHIHVVNGL+NETLLVHCKS DDDLG   L  +G EF WTF+V+ FG TLFWCYL+K NF+VSFE+FWVE 
Subjt:  HLEVV-LLLVVAAVVVVQPCTAVPLPLPRWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVES

Query:  THPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKI
         H WLNSRC+DKNCIWIAKDDGIYLRNNP N+DE VH WNK+
Subjt:  THPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKI

XP_008461539.1 PREDICTED: uncharacterized protein LOC103500111 [Cucumis melo]2.5e-6679.73Show/hide
Query:  MYEEKKHLEVVLLLVVAAVVVVQPCTAVPLPLPRWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEA
        MYE+   L + LLLV+ AVV+VQP TAVPLPLP+WHIHVVNGL N+TL VHCKSKDDDLGNH+L+ KG+E QWTFKVNFFGTTLFWCYL+K NF V+FE+
Subjt:  MYEEKKHLEVVLLLVVAAVVVVQPCTAVPLPLPRWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEA

Query:  FWVESTHPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKIV
        FWVE THPWL SRCFDKNCIWIAKDDGIYLRNN TNVDELVH WNK+V
Subjt:  FWVESTHPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKIV

XP_008462114.1 PREDICTED: uncharacterized protein LOC103500542 [Cucumis melo]7.3e-5876.6Show/hide
Query:  HLEVVLLLVVAAVVVVQPCTAVPLPLPRWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVEST
        HL VV LLV+ A+VVVQPCTAVP+P PRWHIHVVNGL+NETLLVHCKS+DDDLG   L  KG EF WTF+V+ FG TLFWCYL+K NF+VSFE+FWVE  
Subjt:  HLEVVLLLVVAAVVVVQPCTAVPLPLPRWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVEST

Query:  HPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKI
        H WLNSRC+DKNCIWIAKDDGIYLRNNP N++E VH WNKI
Subjt:  HPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKI

TrEMBL top hitse value%identityAlignment
A0A1S3CEQ0 S-protein homolog1.2e-6679.73Show/hide
Query:  MYEEKKHLEVVLLLVVAAVVVVQPCTAVPLPLPRWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEA
        MYE+   L + LLLV+ AVV+VQP TAVPLPLP+WHIHVVNGL N+TL VHCKSKDDDLGNH+L+ KG+E QWTFKVNFFGTTLFWCYL+K NF V+FE+
Subjt:  MYEEKKHLEVVLLLVVAAVVVVQPCTAVPLPLPRWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEA

Query:  FWVESTHPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKIV
        FWVE THPWL SRCFDKNCIWIAKDDGIYLRNN TNVDELVH WNK+V
Subjt:  FWVESTHPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKIV

A0A1S3CG89 S-protein homolog3.5e-5876.6Show/hide
Query:  HLEVVLLLVVAAVVVVQPCTAVPLPLPRWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVEST
        HL VV LLV+ A+VVVQPCTAVP+P PRWHIHVVNGL+NETLLVHCKS+DDDLG   L  KG EF WTF+V+ FG TLFWCYL+K NF+VSFE+FWVE  
Subjt:  HLEVVLLLVVAAVVVVQPCTAVPLPLPRWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVEST

Query:  HPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKI
        H WLNSRC+DKNCIWIAKDDGIYLRNNP N++E VH WNKI
Subjt:  HPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKI

A0A5A7VL75 S-protein homolog2.9e-6881.08Show/hide
Query:  MYEEKKHLEVVLLLVVAAVVVVQPCTAVPLPLPRWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEA
        MYEEK +L VV+LLV+ AV VVQPCTAVPLPLP+W IHVVNGLNNETLLVHCKSKDDDLG H+L +KGEEFQWTFKVNFFGTTLFWCYLQK NF+VSFE+
Subjt:  MYEEKKHLEVVLLLVVAAVVVVQPCTAVPLPLPRWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEA

Query:  FWVESTHPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKIV
        FWVE +HPWLNSRCF  +CIWIAKDD +YLRNN  NVDE +H+WNKIV
Subjt:  FWVESTHPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKIV

A0A6J1CPC6 S-protein homolog3.0e-4963.27Show/hide
Query:  MYEEKKHLEVVLLLVVAAVVVVQPCTAVPLP---LPRWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVS
        MY + + + VV+ LV     V+Q  TA  L    LP+WHIHVVNGL+  TL VHCKSKDDDLG H+L  +G+EFQWTF+VNF+ TTL+WCYL+K N +VS
Subjt:  MYEEKKHLEVVLLLVVAAVVVVQPCTAVPLP---LPRWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVS

Query:  FEAFWVESTHPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQW
        FE+FWVE TH WL  RC DKNCIW AKDDGIYLRNNP  VDE +H+W
Subjt:  FEAFWVESTHPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQW

A0A6J1L0E8 S-protein homolog5.0e-4458.9Show/hide
Query:  YEEKKHLE-VVLLLVVAAVVVVQPCTAV--PLPLPRWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSF
        Y +K+HL+    LL + A  + QP       +P+ +W +HVVN LNN TL VHCKSKDDDLG H+L   G EFQW+FK N + TTLFWC L+K N  VSF
Subjt:  YEEKKHLE-VVLLLVVAAVVVVQPCTAV--PLPLPRWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSF

Query:  EAFWVESTHPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQW
        EAFW+E TH WLN RC+ +NCIW AKDDG+YLRNNP  VDE VH+W
Subjt:  EAFWVESTHPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQW

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 27.5e-1335.04Show/hide
Query:  PLPRWHIHVVNGLNNE-TLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVESTHPWLNSRCFDKNCIWIAKDDGIY
        P  +  + + N L N+ TLL HCKSKDDDLGN +L   GE + ++F   FFG TL++C     N + SF+  + +      +++C    C+W  + +G  
Subjt:  PLPRWHIHVVNGLNNE-TLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVESTHPWLNSRCFDKNCIWIAKDDGIY

Query:  LRNNPTNVDELVHQWNK
          N+ T   +L + WNK
Subjt:  LRNNPTNVDELVHQWNK

F4JLS0 S-protein homolog 12.0e-2143.86Show/hide
Query:  LPRWHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVESTHPWLNSRCFDKNCIWIAKDDGIYL
        +  W + VVNGL   ETL +HCKSK+DDLG  +L  +   F W F  N   +T FWCY+ K N +++   FW +     L  RC  KNCIW AK DG+YL
Subjt:  LPRWHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVESTHPWLNSRCFDKNCIWIAKDDGIYL

Query:  RNNPTNVDELVHQW
         N+ +  D L  +W
Subjt:  RNNPTNVDELVHQW

P0DN92 S-protein homolog 241.0e-0939.42Show/hide
Query:  NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVS-FEAFWVESTHPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVH
        N+  L +HCKS+DDDLG H L AKGE F W F VNF  +TL++C   +       FE +           RC   NC W A+ DGIY  +       L +
Subjt:  NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVS-FEAFWVESTHPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVH

Query:  QWNK
         W K
Subjt:  QWNK

Q2HQ46 S-protein homolog 742.4e-1937.96Show/hide
Query:  LLLVVAAVVVVQPCTAVPLPLPR---WHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVESTH
        L+L     V+ +  T   + +P+   W + V NGL   ETL +HCKSK++DLG+ +L    + F W F  N   +TLFWCY+ K + +++ + FW +   
Subjt:  LLLVVAAVVVVQPCTAVPLPLPR---WHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVESTH

Query:  PWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQW
          L  RC  KNC+W AK+DG+YL N+    D L  +W
Subjt:  PWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQW

Q9FI83 S-protein homolog 283.5e-1037.14Show/hide
Query:  VNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVESTHPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDE
        +   N+  L +HCKS+DDDLG H L AKGE F W F VNF  +TL +C   +   N      +V S   +   RC   NC W A+ DG +   +      
Subjt:  VNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVESTHPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDE

Query:  LVHQW
        L + W
Subjt:  LVHQW

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family5.3e-1435.04Show/hide
Query:  PLPRWHIHVVNGLNNE-TLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVESTHPWLNSRCFDKNCIWIAKDDGIY
        P  +  + + N L N+ TLL HCKSKDDDLGN +L   GE + ++F   FFG TL++C     N + SF+  + +      +++C    C+W  + +G  
Subjt:  PLPRWHIHVVNGLNNE-TLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVESTHPWLNSRCFDKNCIWIAKDDGIY

Query:  LRNNPTNVDELVHQWNK
          N+ T   +L + WNK
Subjt:  LRNNPTNVDELVHQWNK

AT4G16295.1 S-protein homologue 11.4e-2243.86Show/hide
Query:  LPRWHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVESTHPWLNSRCFDKNCIWIAKDDGIYL
        +  W + VVNGL   ETL +HCKSK+DDLG  +L  +   F W F  N   +T FWCY+ K N +++   FW +     L  RC  KNCIW AK DG+YL
Subjt:  LPRWHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVESTHPWLNSRCFDKNCIWIAKDDGIYL

Query:  RNNPTNVDELVHQW
         N+ +  D L  +W
Subjt:  RNNPTNVDELVHQW

AT4G29035.1 Plant self-incompatibility protein S1 family1.7e-2037.96Show/hide
Query:  LLLVVAAVVVVQPCTAVPLPLPR---WHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVESTH
        L+L     V+ +  T   + +P+   W + V NGL   ETL +HCKSK++DLG+ +L    + F W F  N   +TLFWCY+ K + +++ + FW +   
Subjt:  LLLVVAAVVVVQPCTAVPLPLPR---WHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVESTH

Query:  PWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQW
          L  RC  KNC+W AK+DG+YL N+    D L  +W
Subjt:  PWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQW

AT5G04347.1 Plant self-incompatibility protein S1 family5.0e-1235.96Show/hide
Query:  VVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQK---INFNVSFEAF---WVESTHPWLNSRCFDKNCIWIAKDDGIYLRN
        V N LNN+ L V C+SKDD+LG+H L   G+  +  F  N +  TLFWC L K      +V+F+A+   W     P           +WIA++DGIY   
Subjt:  VVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQK---INFNVSFEAF---WVESTHPWLNSRCFDKNCIWIAKDDGIYLRN

Query:  NPTNVDELVHQWNK
        +P    +  + W K
Subjt:  NPTNVDELVHQWNK

AT5G06030.1 Plant self-incompatibility protein S1 family2.5e-1137.14Show/hide
Query:  VNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVESTHPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDE
        +   N+  L +HCKS+DDDLG H L AKGE F W F VNF  +TL +C   +   N      +V S   +   RC   NC W A+ DG +   +      
Subjt:  VNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVESTHPWLNSRCFDKNCIWIAKDDGIYLRNNPTNVDE

Query:  LVHQW
        L + W
Subjt:  LVHQW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGAAGAAAAGAAGCATTTGGAAGTGGTTCTTTTACTTGTGGTGGCAGCTGTGGTAGTGGTCCAGCCGTGCACGGCGGTTCCATTGCCACTCCCAAGGTGGCACAT
TCATGTGGTAAATGGGTTGAACAATGAAACCCTATTAGTTCATTGTAAGTCCAAAGATGATGATTTGGGAAATCACAGTTTGGCTGCCAAAGGAGAAGAATTCCAATGGA
CTTTTAAGGTCAATTTTTTTGGAACAACGTTGTTTTGGTGCTACCTGCAAAAGATAAATTTTAATGTGTCGTTTGAAGCTTTTTGGGTTGAAAGCACTCACCCTTGGCTT
AATTCTAGGTGCTTTGACAAAAATTGCATTTGGATTGCTAAAGATGATGGAATTTACTTGAGAAACAATCCTACTAATGTTGATGAACTTGTACATCAGTGGAACAAAAT
AGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTACGAAGAAAAGAAGCATTTGGAAGTGGTTCTTTTACTTGTGGTGGCAGCTGTGGTAGTGGTCCAGCCGTGCACGGCGGTTCCATTGCCACTCCCAAGGTGGCACAT
TCATGTGGTAAATGGGTTGAACAATGAAACCCTATTAGTTCATTGTAAGTCCAAAGATGATGATTTGGGAAATCACAGTTTGGCTGCCAAAGGAGAAGAATTCCAATGGA
CTTTTAAGGTCAATTTTTTTGGAACAACGTTGTTTTGGTGCTACCTGCAAAAGATAAATTTTAATGTGTCGTTTGAAGCTTTTTGGGTTGAAAGCACTCACCCTTGGCTT
AATTCTAGGTGCTTTGACAAAAATTGCATTTGGATTGCTAAAGATGATGGAATTTACTTGAGAAACAATCCTACTAATGTTGATGAACTTGTACATCAGTGGAACAAAAT
AGTTTGA
Protein sequenceShow/hide protein sequence
MYEEKKHLEVVLLLVVAAVVVVQPCTAVPLPLPRWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKINFNVSFEAFWVESTHPWL
NSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKIV