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Lsi02G020530 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G020530
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-protein homolog
Genome locationchr02:26674269..26677376
RNA-Seq ExpressionLsi02G020530
SyntenyLsi02G020530
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646231.1 hypothetical protein Csa_023825, partial [Cucumis sativus]2.6e-4569.83Show/hide
Query:  LEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIYL
        LEKW IHVVNGLSN QILL HCKSKDNDLGE  +   +E+NW FRVNFW++TLFWCYL+KPNGQH SFE+FW+E  S+WLY  C E  CIWTAKDDGIYL
Subjt:  LEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIYL

Query:  ANNPD-KTQLLIHKWD
         +N D    +LIHKW+
Subjt:  ANNPD-KTQLLIHKWD

XP_022143772.1 S-protein homolog 74-like [Momordica charantia]6.2e-4765.85Show/hide
Query:  IEQMEA-TPLEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIW
        +E +EA + L+KW+IHVVNGLSN Q L VHCKSKDNDLGEHN+ + +E+NW+FRVN W++TLFWCYL KP+G+  SF+ FWVEK+SIWL+YRC  S CIW
Subjt:  IEQMEA-TPLEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIW

Query:  TAKDDGIYLANNPDKTQLLIHKW
        TAKDDGIYL +NP +  +L+H+W
Subjt:  TAKDDGIYLANNPDKTQLLIHKW

XP_022143780.1 S-protein homolog 1-like [Momordica charantia]7.9e-5068.85Show/hide
Query:  IEQMEATPLEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWT
        +EQ+EA PL KW+IHV N LSN Q+L VHCKSK++DLGEHN+   +E+NW FRVN WD+TL+WCYL+KPNGQ  SF+AFWVEK+SIWLYY+CLES C W 
Subjt:  IEQMEATPLEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWT

Query:  AKDDGIYLANNPDKTQLLIHKW
        AKDDGIYL NNPD   + +HKW
Subjt:  AKDDGIYLANNPDKTQLLIHKW

XP_031745090.1 S-protein homolog 1-like [Cucumis sativus]1.1e-4666.94Show/hide
Query:  IEQMEATPLEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWT
        +E+ +A  LEKW IHVVNGLSN QILL HCKSKDNDLGE  +   +E+NW FRVNFW++TLFWCYL+KPNGQH SFE+FW+E  S+WLY  C E  CIWT
Subjt:  IEQMEATPLEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWT

Query:  AKDDGIYLANNPD-KTQLLIHKWD
        AKDDGIYL +N D    +LIHKW+
Subjt:  AKDDGIYLANNPD-KTQLLIHKWD

XP_038896594.1 S-protein homolog 1-like [Benincasa hispida]1.4e-4661.9Show/hide
Query:  MGKIEQMEATPLEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKC
        +  +++ +A  L KW+IHVVNGLSN QIL VHCKSKDNDLGEH +   +E+NW FRVNFW++TLFWCYL+KPN QH SF+AFW+E  S+WLY  C +S C
Subjt:  MGKIEQMEATPLEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKC

Query:  IWTAKDDGIYLANNPDKTQLLIHKWD
        IW AKDDG+YL +N +   +LIHKW+
Subjt:  IWTAKDDGIYLANNPDKTQLLIHKWD

TrEMBL top hitse value%identityAlignment
A0A1S4E390 S-protein homolog4.1e-4460.66Show/hide
Query:  IEQMEATPLEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWT
        ++  +A  LE+W IH+VNGLSN Q L VHC+SKD+DLG+  +   +E+NW+F++NFWD+TLFWCYL+KPN +  SFEAFWVE++SIWL+YRC +S CIWT
Subjt:  IEQMEATPLEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWT

Query:  AKDDGIYLANNPDKTQLLIHKW
        AKDDGIYL +NP     L+H W
Subjt:  AKDDGIYLANNPDKTQLLIHKW

A0A6J1CPR8 S-protein homolog3.8e-5068.85Show/hide
Query:  IEQMEATPLEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWT
        +EQ+EA PL KW+IHV N LSN Q+L VHCKSK++DLGEHN+   +E+NW FRVN WD+TL+WCYL+KPNGQ  SF+AFWVEK+SIWLYY+CLES C W 
Subjt:  IEQMEATPLEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWT

Query:  AKDDGIYLANNPDKTQLLIHKW
        AKDDGIYL NNPD   + +HKW
Subjt:  AKDDGIYLANNPDKTQLLIHKW

A0A6J1CQH6 S-protein homolog6.5e-4259.02Show/hide
Query:  IEQMEATPLEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWT
        +E   +  L++W IHVVNGL N ++L VHCKS+D+DLGE N+   +E++W+FRVN  D+TLFWC+LRKP+ Q  SF+AFWVEK SIWL+YRC ++ CIWT
Subjt:  IEQMEATPLEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWT

Query:  AKDDGIYLANNPDKTQLLIHKW
        AKDDG+YL +NP +  +L+HKW
Subjt:  AKDDGIYLANNPDKTQLLIHKW

A0A6J1CRU0 S-protein homolog3.0e-4765.85Show/hide
Query:  IEQMEA-TPLEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIW
        +E +EA + L+KW+IHVVNGLSN Q L VHCKSKDNDLGEHN+ + +E+NW+FRVN W++TLFWCYL KP+G+  SF+ FWVEK+SIWL+YRC  S CIW
Subjt:  IEQMEA-TPLEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIW

Query:  TAKDDGIYLANNPDKTQLLIHKW
        TAKDDGIYL +NP +  +L+H+W
Subjt:  TAKDDGIYLANNPDKTQLLIHKW

A0A6J1HAC3 S-protein homolog2.6e-3858.26Show/hide
Query:  PLEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIY
        P  KWEIH+ N LSN Q + VHCKSKDNDLGEH + T +E+ W F+VNFWD+TLFWCYLRKPNG   +F+AFWVEK + WL  +C  + C WTA+D+GIY
Subjt:  PLEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIY

Query:  LANNPDKTQLLIHKW
        L +N +     +H W
Subjt:  LANNPDKTQLLIHKW

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 61.2e-1136.63Show/hide
Query:  NAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIYLANNPDKTQLLIHK
        N  +L VHCKS+D+D G H ++    Y W F VNF +STL++C   +   +   F+ +   ++S     RC    C W AK+DGIY      K   L +K
Subjt:  NAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIYLANNPDKTQLLIHK

Query:  W
        W
Subjt:  W

F4JLS0 S-protein homolog 13.7e-2643.48Show/hide
Query:  LEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIYL
        + +W++ VVNGL+  + L +HCKSK++DLGE N+K  + ++W+F  N   ST FWCY+ K NG H +   FW   + + L++RC    CIWTAK DG+YL
Subjt:  LEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIYL

Query:  ANNPDKTQLLIHKWD
         N+     +L  KW+
Subjt:  ANNPDKTQLLIHKWD

P0DN92 S-protein homolog 244.4e-1133.66Show/hide
Query:  NAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIYLANNPDKTQLLIHK
        N  +L +HCKS+D+DLG H +     + W F VNF  STL++C   +   +   FE +   ++    +YRC  + C W A+ DGIY  +       L + 
Subjt:  NAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIYLANNPDKTQLLIHK

Query:  W
        W
Subjt:  W

Q2HQ46 S-protein homolog 743.1e-2542.11Show/hide
Query:  LEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIYL
        + +W++ V NGL+  + L +HCKSK+NDLG+ N+K    ++W+F  N   STLFWCY+ K +G H + + FW   + + L++RC    C+WTAK+DG+YL
Subjt:  LEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIYL

Query:  ANNPDKTQLLIHKW
         N+     +L  KW
Subjt:  ANNPDKTQLLIHKW

Q9FI84 S-protein homolog 271.0e-1237.25Show/hide
Query:  SNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIYLANNPDKTQLLIH
        +N  +L +HCKSKD+DLG H  K    Y W F VNF +STL++C   +       F+    E++    +YRC    C W AK D +Y  +N  +T     
Subjt:  SNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIYLANNPDKTQLLIH

Query:  KW
        KW
Subjt:  KW

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family4.1e-1231.03Show/hide
Query:  PLEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIY
        P  K  + + N L N   LL HCKSKD+DLG   ++    +++SF   F+  TL++C    PN  H SF+ +   ++S     +C   +C+W  + +G  
Subjt:  PLEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIY

Query:  LANNPDKTQLLIHKWD
          N+  K   L + W+
Subjt:  LANNPDKTQLLIHKWD

AT4G16295.1 S-protein homologue 12.6e-2743.48Show/hide
Query:  LEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIYL
        + +W++ VVNGL+  + L +HCKSK++DLGE N+K  + ++W+F  N   ST FWCY+ K NG H +   FW   + + L++RC    CIWTAK DG+YL
Subjt:  LEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIYL

Query:  ANNPDKTQLLIHKWD
         N+     +L  KW+
Subjt:  ANNPDKTQLLIHKWD

AT4G29035.1 Plant self-incompatibility protein S1 family2.2e-2642.11Show/hide
Query:  LEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIYL
        + +W++ V NGL+  + L +HCKSK+NDLG+ N+K    ++W+F  N   STLFWCY+ K +G H + + FW   + + L++RC    C+WTAK+DG+YL
Subjt:  LEKWEIHVVNGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIYL

Query:  ANNPDKTQLLIHKW
         N+     +L  KW
Subjt:  ANNPDKTQLLIHKW

AT5G04350.1 Plant self-incompatibility protein S1 family5.7e-1437.89Show/hide
Query:  NGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYL-RKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIYLANN
        N L ++++L VHC+SKD+DLGEH +K   +Y ++F  N W +T F C + + PN +H      +V  E+ W   + LE+ C W  ++DGIY + +
Subjt:  NGLSNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYL-RKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIYLANN

AT5G06020.1 Plant self-incompatibility protein S1 family7.4e-1437.25Show/hide
Query:  SNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIYLANNPDKTQLLIH
        +N  +L +HCKSKD+DLG H  K    Y W F VNF +STL++C   +       F+    E++    +YRC    C W AK D +Y  +N  +T     
Subjt:  SNAQILLVHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIYLANNPDKTQLLIH

Query:  KW
        KW
Subjt:  KW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACGTTCATCAACATTAGCAGAATTGTTTCTCAAGTAAATTCCATCATCTTTAGCAATCCAAATGCAATTTTTGTCAAAGCACCTAGAAGCGAGCCAAGGGGTTT
CATTGTTCAATCCATTTACTACATGAATGTGCCACGTTGGGAGTGGCAATGGAACCGATGTGCTCGGTTGAACCATCGCCATAGCCGCCACCACAAAGAGAATGAAAAAG
ATGATGAAGAAGGAGATGATATGGGAAAAATAGAGCAAATGGAAGCAACCCCTCTTGAGAAATGGGAAATCCATGTGGTGAATGGGCTCAGCAATGCTCAAATATTGCTT
GTTCATTGCAAATCAAAAGACAATGATTTAGGAGAACACAACATCAAAACTGCCTCTGAATACAATTGGTCTTTTAGAGTTAACTTTTGGGATTCAACCTTGTTTTGGTG
TTACTTAAGAAAGCCAAATGGACAACATAAGTCTTTTGAGGCTTTTTGGGTTGAAAAAGAATCCATTTGGCTCTATTATAGATGTTTAGAATCCAAATGTATTTGGACTG
CCAAAGATGATGGAATCTACCTTGCAAATAACCCTGATAAAACTCAACTTTTGATTCATAAGTGGGATAAT
mRNA sequenceShow/hide mRNA sequence
ATACGTAAAGCACTCAAGCCATTTTGTTCCACTGATGAACACGTTCATCAACATTAGCAGAATTGTTTCTCAAGTAAATTCCATCATCTTTAGCAATCCAAATGCAATTT
TTGTCAAAGCACCTAGAAGCGAGCCAAGGGGTTTCATTGTTCAATCCATTTACTACATGAATGTGCCACGTTGGGAGTGGCAATGGAACCGATGTGCTCGGTTGAACCAT
CGCCATAGCCGCCACCACAAAGAGAATGAAAAAGATGATGAAGAAGGAGATGATATGGGAAAAATAGAGCAAATGGAAGCAACCCCTCTTGAGAAATGGGAAATCCATGT
GGTGAATGGGCTCAGCAATGCTCAAATATTGCTTGTTCATTGCAAATCAAAAGACAATGATTTAGGAGAACACAACATCAAAACTGCCTCTGAATACAATTGGTCTTTTA
GAGTTAACTTTTGGGATTCAACCTTGTTTTGGTGTTACTTAAGAAAGCCAAATGGACAACATAAGTCTTTTGAGGCTTTTTGGGTTGAAAAAGAATCCATTTGGCTCTAT
TATAGATGTTTAGAATCCAAATGTATTTGGACTGCCAAAGATGATGGAATCTACCTTGCAAATAACCCTGATAAAACTCAACTTTTGATTCATAAGTGGGATAAT
Protein sequenceShow/hide protein sequence
MNTFINISRIVSQVNSIIFSNPNAIFVKAPRSEPRGFIVQSIYYMNVPRWEWQWNRCARLNHRHSRHHKENEKDDEEGDDMGKIEQMEATPLEKWEIHVVNGLSNAQILL
VHCKSKDNDLGEHNIKTASEYNWSFRVNFWDSTLFWCYLRKPNGQHKSFEAFWVEKESIWLYYRCLESKCIWTAKDDGIYLANNPDKTQLLIHKWDN