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Lsi02G020540 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G020540
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-protein homolog
Genome locationchr02:26705621..26706522
RNA-Seq ExpressionLsi02G020540
SyntenyLsi02G020540
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016902699.1 PREDICTED: uncharacterized protein LOC107991826 [Cucumis melo]4.6e-5979.67Show/hide
Query:  IKPTNGAVLKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWT
        +KPT    L+RWHIHIVNGLSN QNLFVHC+SKDDDLG++ LSVG EF+W+F++NFWDTTLFWCYL+KPNAESVSFEAFW+E++SIWL+YRC+KSNCIWT
Subjt:  IKPTNGAVLKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWT

Query:  AKDDGIYLKDNPVNRDVLVHKWG
        AKDDGIYLKDNP NRD LVH WG
Subjt:  AKDDGIYLKDNPVNRDVLVHKWG

XP_022143772.1 S-protein homolog 74-like [Momordica charantia]9.3e-5275.44Show/hide
Query:  LKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYL
        LK+W IH+VNGLSNGQ LFVHCKSKD+DLGE NL+ G EF+W+FRVN W+TTLFWCYL KP+ +S SF+ FW+EK+SIWL+YRCY SNCIWTAKDDGIYL
Subjt:  LKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYL

Query:  KDNPVNRDVLVHKW
        +DNPV RD+LVH+W
Subjt:  KDNPVNRDVLVHKW

XP_022143780.1 S-protein homolog 1-like [Momordica charantia]1.8e-4772.81Show/hide
Query:  LKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYL
        L +W IH+ N LSN Q LFVHCKSK+DDLGE NLSVG EF+W FRVN WDTTL+WCYL+KPN +SVSF+AFW+EK SIWLYY+C +SNC W AKDDGIYL
Subjt:  LKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYL

Query:  KDNPVNRDVLVHKW
        ++NP  RDV VHKW
Subjt:  KDNPVNRDVLVHKW

XP_022143829.1 S-protein homolog 74-like [Momordica charantia]5.4e-5272.95Show/hide
Query:  IKPTNGAVLKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWT
        ++P     LKRW+IH+VNGL NG+ LFVHCKS+DDDLGE+NL  G EF W+FRVN  DTTLFWC+LRKP+A+SVSF+AFW+EK SIWL+YRCY +NCIWT
Subjt:  IKPTNGAVLKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWT

Query:  AKDDGIYLKDNPVNRDVLVHKW
        AKDDG+YL+DNPV RDVLVHKW
Subjt:  AKDDGIYLKDNPVNRDVLVHKW

XP_038896594.1 S-protein homolog 1-like [Benincasa hispida]4.8e-4873.28Show/hide
Query:  AVLKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGI
        A L +W IH+VNGLSNGQ LFVHCKSKD+DLGE  LSVG EF+W FRVNFW+TTLFWCYL+KPNA+  SF+AFWIE  S+WLY  CY SNCIW AKDDG+
Subjt:  AVLKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGI

Query:  YLKDNPVNRDVLVHKW
        YLKDN  + DVL+HKW
Subjt:  YLKDNPVNRDVLVHKW

TrEMBL top hitse value%identityAlignment
A0A1S4E390 S-protein homolog2.2e-5979.67Show/hide
Query:  IKPTNGAVLKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWT
        +KPT    L+RWHIHIVNGLSN QNLFVHC+SKDDDLG++ LSVG EF+W+F++NFWDTTLFWCYL+KPNAESVSFEAFW+E++SIWL+YRC+KSNCIWT
Subjt:  IKPTNGAVLKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWT

Query:  AKDDGIYLKDNPVNRDVLVHKWG
        AKDDGIYLKDNP NRD LVH WG
Subjt:  AKDDGIYLKDNPVNRDVLVHKWG

A0A6J1CPR8 S-protein homolog8.8e-4872.81Show/hide
Query:  LKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYL
        L +W IH+ N LSN Q LFVHCKSK+DDLGE NLSVG EF+W FRVN WDTTL+WCYL+KPN +SVSF+AFW+EK SIWLYY+C +SNC W AKDDGIYL
Subjt:  LKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYL

Query:  KDNPVNRDVLVHKW
        ++NP  RDV VHKW
Subjt:  KDNPVNRDVLVHKW

A0A6J1CQH6 S-protein homolog2.6e-5272.95Show/hide
Query:  IKPTNGAVLKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWT
        ++P     LKRW+IH+VNGL NG+ LFVHCKS+DDDLGE+NL  G EF W+FRVN  DTTLFWC+LRKP+A+SVSF+AFW+EK SIWL+YRCY +NCIWT
Subjt:  IKPTNGAVLKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWT

Query:  AKDDGIYLKDNPVNRDVLVHKW
        AKDDG+YL+DNPV RDVLVHKW
Subjt:  AKDDGIYLKDNPVNRDVLVHKW

A0A6J1CRU0 S-protein homolog4.5e-5275.44Show/hide
Query:  LKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYL
        LK+W IH+VNGLSNGQ LFVHCKSKD+DLGE NL+ G EF+W+FRVN W+TTLFWCYL KP+ +S SF+ FW+EK+SIWL+YRCY SNCIWTAKDDGIYL
Subjt:  LKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYL

Query:  KDNPVNRDVLVHKW
        +DNPV RD+LVH+W
Subjt:  KDNPVNRDVLVHKW

A0A6J1HAC3 S-protein homolog6.7e-4064.29Show/hide
Query:  RWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYLKD
        +W IHI N LSNGQ +FVHCKSKD+DLGE  L+ G EF W F+VNFWDTTLFWCYLRKPN   ++F+AFW+EKR+ WL  +C  + C WTA+D+GIYLKD
Subjt:  RWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYLKD

Query:  NPVNRDVLVHKW
        N  N D  VH W
Subjt:  NPVNRDVLVHKW

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 61.4e-1036.63Show/hide
Query:  NGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYLKDNPVNRDVLVHK
        N   L VHCKS+DDD G   L  G  + W F VNF ++TL++C   +   +   F+ +   + S     RC   NC W AK+DGIY       ++ L +K
Subjt:  NGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYLKDNPVNRDVLVHK

Query:  W
        W
Subjt:  W

F4JLS0 S-protein homolog 11.4e-2645.61Show/hide
Query:  LKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYL
        +  W + +VNGL+ G+ LF+HCKSK+DDLGE NL     F W+F  N   +T FWCY+ K N   ++   FW +   + L++RC   NCIWTAK DG+YL
Subjt:  LKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYL

Query:  KDNPVNRDVLVHKW
         ++    DVL  KW
Subjt:  KDNPVNRDVLVHKW

P0DN92 S-protein homolog 247.5e-1239.42Show/hide
Query:  NGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIY-LKDNPVNRDVLVH
        N   L +HCKS+DDDLG   L+ G  F W F VNF  +TL++C   +   +   FE +    R+   +YRC  +NC W A+ DGIY   ++PV +  L +
Subjt:  NGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIY-LKDNPVNRDVLVH

Query:  KWGK
         W K
Subjt:  KWGK

Q2HQ46 S-protein homolog 741.5e-2542.11Show/hide
Query:  LKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYL
        +  W + + NGL+ G+ LF+HCKSK++DLG+ NL     F W+F  N   +TLFWCY+ K +   ++ + FW +   + L++RC   NC+WTAK+DG+YL
Subjt:  LKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYL

Query:  KDNPVNRDVLVHKW
         ++ +  DVL  KW
Subjt:  KDNPVNRDVLVHKW

Q40975 Self-incompatibility protein S13.1e-1032.98Show/hide
Query:  IHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIY
        + I+N   NG+++ +HC+SKD+DL  + ++ G +  +SFR +F+ TT F+C L+        F ++  ++       RC  S C+W   DDG+Y
Subjt:  IHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIY

Arabidopsis top hitse value%identityAlignment
AT3G27680.1 Plant self-incompatibility protein S1 family2.2e-1140Show/hide
Query:  IHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLR-KPNAESV-SFEAFWIEKRSIWLYYRCYKSNC--IWTAKDDGIYLK
        I IVN L + +NL++ C SK+D +G K + VG ++  SFR N W TT F C L+ +PN     +F AF          Y  Y +     W A++DGIYLK
Subjt:  IHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLR-KPNAESV-SFEAFWIEKRSIWLYYRCYKSNC--IWTAKDDGIYLK

AT4G16195.1 Plant self-incompatibility protein S1 family2.2e-1133.33Show/hide
Query:  IHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYLKDNPV
        + I N L N   L  HCKSKDDDLG + L  G  + +SF   F+  TL++C    PN ES SF+  + + R      +C    C+W  + +G    ++  
Subjt:  IHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYLKDNPV

Query:  NRDVLVHKWGK
         +  L + W K
Subjt:  NRDVLVHKWGK

AT4G16295.1 S-protein homologue 19.9e-2845.61Show/hide
Query:  LKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYL
        +  W + +VNGL+ G+ LF+HCKSK+DDLGE NL     F W+F  N   +T FWCY+ K N   ++   FW +   + L++RC   NCIWTAK DG+YL
Subjt:  LKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYL

Query:  KDNPVNRDVLVHKW
         ++    DVL  KW
Subjt:  KDNPVNRDVLVHKW

AT4G29035.1 Plant self-incompatibility protein S1 family1.1e-2642.11Show/hide
Query:  LKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYL
        +  W + + NGL+ G+ LF+HCKSK++DLG+ NL     F W+F  N   +TLFWCY+ K +   ++ + FW +   + L++RC   NC+WTAK+DG+YL
Subjt:  LKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYL

Query:  KDNPVNRDVLVHKW
         ++ +  DVL  KW
Subjt:  KDNPVNRDVLVHKW

AT5G04350.1 Plant self-incompatibility protein S1 family3.4e-1233.66Show/hide
Query:  NGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLR-----KPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYLKDNP
        N L + + L VHC+SKDDDLGE  L +G +++++F  N W TT F C +      K + + V++E  W          +  +++C W  ++DGIY   + 
Subjt:  NGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLR-----KPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYLKDNP

Query:  V
        V
Subjt:  V


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATTAAACCAACCAACGGTGCGGTGCTGAAAAGATGGCACATCCACATTGTGAATGGGCTAAGCAATGGCCAAAACTTATTTGTTCACTGCAAATCTAAAGATGA
TGATTTAGGCGAAAAAAACCTTAGCGTTGGAATTGAATTCGATTGGAGTTTTAGGGTGAACTTTTGGGATACGACATTGTTTTGGTGTTACTTGCGGAAGCCAAATGCAG
AATCTGTATCATTCGAGGCATTTTGGATTGAGAAGAGATCGATTTGGCTATATTATAGATGTTATAAGTCTAATTGCATTTGGACAGCTAAAGATGATGGAATCTATTTG
AAAGACAATCCTGTTAATAGAGATGTCTTGGTTCATAAGTGGGGAAAAATCGCTAATTATGCACCAAAAACATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATTAAACCAACCAACGGTGCGGTGCTGAAAAGATGGCACATCCACATTGTGAATGGGCTAAGCAATGGCCAAAACTTATTTGTTCACTGCAAATCTAAAGATGA
TGATTTAGGCGAAAAAAACCTTAGCGTTGGAATTGAATTCGATTGGAGTTTTAGGGTGAACTTTTGGGATACGACATTGTTTTGGTGTTACTTGCGGAAGCCAAATGCAG
AATCTGTATCATTCGAGGCATTTTGGATTGAGAAGAGATCGATTTGGCTATATTATAGATGTTATAAGTCTAATTGCATTTGGACAGCTAAAGATGATGGAATCTATTTG
AAAGACAATCCTGTTAATAGAGATGTCTTGGTTCATAAGTGGGGAAAAATCGCTAATTATGCACCAAAAACATAA
Protein sequenceShow/hide protein sequence
MKIKPTNGAVLKRWHIHIVNGLSNGQNLFVHCKSKDDDLGEKNLSVGIEFDWSFRVNFWDTTLFWCYLRKPNAESVSFEAFWIEKRSIWLYYRCYKSNCIWTAKDDGIYL
KDNPVNRDVLVHKWGKIANYAPKT