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Lsi02G020550 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G020550
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-protein homolog
Genome locationchr02:26709069..26709575
RNA-Seq ExpressionLsi02G020550
SyntenyLsi02G020550
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646235.1 hypothetical protein Csa_015792, partial [Cucumis sativus]4.3e-6280.77Show/hide
Query:  QYLFVGAVLPPAFVEKWHVHVINRLSNGKLLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHETDHYWLHYRCTL-Q
        Q+ FVGAVLPPA V KWH+HVIN LSNGKL+ HCKSRDTDIGEQY++ G EIQWSFKENV+G+TLFWCFM+ PNGSF+SFEVFWHET HYWLHYRCTL Q
Subjt:  QYLFVGAVLPPAFVEKWHVHVINRLSNGKLLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHETDHYWLHYRCTL-Q

Query:  GTCLWTAKDDGIYLRNIPDGIEERIHEWKR
        GTC W AKDDGIYLRNIPD I+E+IHEWK+
Subjt:  GTCLWTAKDDGIYLRNIPDGIEERIHEWKR

XP_022143645.1 S-protein homolog 1-like [Momordica charantia]4.3e-3853.06Show/hide
Query:  RSLSYLVVLMSVLLVVVHEQYLFVGAVLPPAFVEKWHVHVINRLSNGKLLVHCKSRDTDIG-EQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASF
        RS++ ++ L+S +  V+    L   A L  A + KWH+HV+N LS   L VHCKS+D D+G    V +G E QW+F+ N W TTL+WC++KKPN    SF
Subjt:  RSLSYLVVLMSVLLVVVHEQYLFVGAVLPPAFVEKWHVHVINRLSNGKLLVHCKSRDTDIG-EQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASF

Query:  EVFWHETDHYWLHYRCTLQGTCLWTAKDDGIYLRNIPDGIEERIHEW
        E FW E  H WL YRCT    C+WTAKDDGIYLRN PDG++ERIHEW
Subjt:  EVFWHETDHYWLHYRCTLQGTCLWTAKDDGIYLRNIPDGIEERIHEW

XP_022143724.1 S-protein homolog 1-like [Momordica charantia]1.8e-5267.14Show/hide
Query:  VVLMSVLLVVVHEQYLFVGAVLPPAFVEKWHVHVINRLSNGKLLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHET
        VVL++VL  +   Q  FV A+ P  +V+KWHVHV+N LSN  L  HCKSRDTD+GE  +N+G EIQWSFKENVWGTTLFWCF+KKP GS ASF+VFW E 
Subjt:  VVLMSVLLVVVHEQYLFVGAVLPPAFVEKWHVHVINRLSNGKLLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHET

Query:  DHYWLHYRCTLQGTCLWTAKDDGIYLRNIPDGIEERIHEW
        DH WLHYRCT  GTC+WTAKDDGIY+RNIPD ++E +H+W
Subjt:  DHYWLHYRCTLQGTCLWTAKDDGIYLRNIPDGIEERIHEW

XP_022148919.1 S-protein homolog 1-like [Momordica charantia]7.3e-3853.33Show/hide
Query:  RSLSYLVVLMSVLLVVVHEQYLFVGAVLPPAFVEK----WHVHVINRLSNGKLLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSF
        R +  L+VL S+L+V   +    +G  L    V+     WH+HV+N LS   L VHCKS+D D+G   + +G EIQWSF ENVWGTTLFWCF++KP G+ 
Subjt:  RSLSYLVVLMSVLLVVVHEQYLFVGAVLPPAFVEK----WHVHVINRLSNGKLLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSF

Query:  ASFEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIYLRNIPDGIEERIHEW
        ASF+VFW E+ H WLH+RC +  TC+W AKDDGIYLRN  D I+E IH+W
Subjt:  ASFEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIYLRNIPDGIEERIHEW

XP_038896414.1 S-protein homolog 1-like [Benincasa hispida]1.1e-7888.08Show/hide
Query:  MGRSLSYLVVLMSVLLVVVHEQYLFVGAVLPPAFVEKWHVHVINRLSNGKLLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFAS
        MGR+LSYLVVLMSVL +VVH+Q++FVGAVLPPAFV+KWHVHVIN LSNGKL VHCKSRDTDIGEQY+N G EIQWSFKENVWGTTLFWCF+K PNGSFAS
Subjt:  MGRSLSYLVVLMSVLLVVVHEQYLFVGAVLPPAFVEKWHVHVINRLSNGKLLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFAS

Query:  FEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIYLRNIPDGIEERIHEWKRG
        FEVFWHE  HYWLHYRCTLQGTC WTAKDDGIYLRNIPDGIEE+IHEWKRG
Subjt:  FEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIYLRNIPDGIEERIHEWKRG

TrEMBL top hitse value%identityAlignment
A0A6J1CPC6 S-protein homolog2.1e-3853.06Show/hide
Query:  RSLSYLVVLMSVLLVVVHEQYLFVGAVLPPAFVEKWHVHVINRLSNGKLLVHCKSRDTDIG-EQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASF
        RS++ ++ L+S +  V+    L   A L  A + KWH+HV+N LS   L VHCKS+D D+G    V +G E QW+F+ N W TTL+WC++KKPN    SF
Subjt:  RSLSYLVVLMSVLLVVVHEQYLFVGAVLPPAFVEKWHVHVINRLSNGKLLVHCKSRDTDIG-EQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASF

Query:  EVFWHETDHYWLHYRCTLQGTCLWTAKDDGIYLRNIPDGIEERIHEW
        E FW E  H WL YRCT    C+WTAKDDGIYLRN PDG++ERIHEW
Subjt:  EVFWHETDHYWLHYRCTLQGTCLWTAKDDGIYLRNIPDGIEERIHEW

A0A6J1CQ65 S-protein homolog8.7e-5367.14Show/hide
Query:  VVLMSVLLVVVHEQYLFVGAVLPPAFVEKWHVHVINRLSNGKLLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHET
        VVL++VL  +   Q  FV A+ P  +V+KWHVHV+N LSN  L  HCKSRDTD+GE  +N+G EIQWSFKENVWGTTLFWCF+KKP GS ASF+VFW E 
Subjt:  VVLMSVLLVVVHEQYLFVGAVLPPAFVEKWHVHVINRLSNGKLLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHET

Query:  DHYWLHYRCTLQGTCLWTAKDDGIYLRNIPDGIEERIHEW
        DH WLHYRCT  GTC+WTAKDDGIY+RNIPD ++E +H+W
Subjt:  DHYWLHYRCTLQGTCLWTAKDDGIYLRNIPDGIEERIHEW

A0A6J1D5G6 S-protein homolog3.5e-3853.33Show/hide
Query:  RSLSYLVVLMSVLLVVVHEQYLFVGAVLPPAFVEK----WHVHVINRLSNGKLLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSF
        R +  L+VL S+L+V   +    +G  L    V+     WH+HV+N LS   L VHCKS+D D+G   + +G EIQWSF ENVWGTTLFWCF++KP G+ 
Subjt:  RSLSYLVVLMSVLLVVVHEQYLFVGAVLPPAFVEK----WHVHVINRLSNGKLLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSF

Query:  ASFEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIYLRNIPDGIEERIHEW
        ASF+VFW E+ H WLH+RC +  TC+W AKDDGIYLRN  D I+E IH+W
Subjt:  ASFEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIYLRNIPDGIEERIHEW

A0A6J1H9E9 S-protein homolog3.9e-3748.65Show/hide
Query:  RSLSYLVVLMSVLLVVVHEQYLFVGAVLPPAFVEKWHVHVINRLSNGKLLVHCKSRDTDIG-EQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASF
        R L     L+ +L   + +       ++P   ++ W VHV+NRL+N  L VHCKS+D D+G    V  G E QWSFK N+W TTLFWC ++KPN ++ SF
Subjt:  RSLSYLVVLMSVLLVVVHEQYLFVGAVLPPAFVEKWHVHVINRLSNGKLLVHCKSRDTDIG-EQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASF

Query:  EVFWHETDHYWLHYRCTLQGTCLWTAKDDGIYLRNIPDGIEERIHEWK
        E FW E  H WL+YRC   G C+WTA+DDG+YLRN PD ++ER+H+WK
Subjt:  EVFWHETDHYWLHYRCTLQGTCLWTAKDDGIYLRNIPDGIEERIHEWK

A0A6J1L0E8 S-protein homolog7.9e-3850Show/hide
Query:  RSLSYLVVLMSVLLVVVHEQYLFVGAVLPPAFVEKWHVHVINRLSNGKLLVHCKSRDTDIG-EQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASF
        R L     L+ +L   + +       ++P   ++KW VHV+NRL+N  L VHCKS+D D+G    V  G E QWSFK N+W TTLFWC ++KPN ++ SF
Subjt:  RSLSYLVVLMSVLLVVVHEQYLFVGAVLPPAFVEKWHVHVINRLSNGKLLVHCKSRDTDIG-EQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASF

Query:  EVFWHETDHYWLHYRCTLQGTCLWTAKDDGIYLRNIPDGIEERIHEWK
        E FW E  H WL+YRC     C+WTAKDDG+YLRN PDG++ER+H+WK
Subjt:  EVFWHETDHYWLHYRCTLQGTCLWTAKDDGIYLRNIPDGIEERIHEWK

SwissProt top hitse value%identityAlignment
F4JLS0 S-protein homolog 12.7e-1938.98Show/hide
Query:  VEKWHVHVINRLSNGK-LLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIY
        + +W V V+N L+ G+ L +HCKS++ D+GE  +       W+F EN+  +T FWC+M K NG   +  VFW   D   L +RC  +  C+WTAK DG+Y
Subjt:  VEKWHVHVINRLSNGK-LLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIY

Query:  LRNIPDGIEERIHEWKRG
        L N   G +    +W+ G
Subjt:  LRNIPDGIEERIHEWKRG

Q2HQ46 S-protein homolog 747.9e-1938.98Show/hide
Query:  VEKWHVHVINRLSNGK-LLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIY
        + +W V V N L+ G+ L +HCKS++ D+G+  +       W+F EN+  +TLFWC+M K +G   + +VFW   D   L +RC  +  C+WTAK+DG+Y
Subjt:  VEKWHVHVINRLSNGK-LLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIY

Query:  LRNIPDGIEERIHEWKRG
        L N   G +    +WK G
Subjt:  LRNIPDGIEERIHEWKRG

Q40975 Self-incompatibility protein S12.0e-0933.68Show/hide
Query:  VHVINRLSNGKLL-VHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIY
        V ++NR  NG+ + +HC+S+D D+  Q V  G ++ +SF+E+ + TT F+C ++    +   F  +  + D      RC+ Q  CLW   DDG+Y
Subjt:  VHVINRLSNGKLL-VHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIY

Q9FMQ4 S-protein homolog 36.3e-0831.63Show/hide
Query:  VHVINRLSNGKLL-VHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHETDHYWLHYRC-------TLQGTCLWTAKD
        V + NRL +G  L +HCKS D D+G + +   G   + F+ ++ GTTLF+C    P G    F+++  + D    H  C       ++QG C+++  D
Subjt:  VHVINRLSNGKLL-VHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHETDHYWLHYRC-------TLQGTCLWTAKD

Q9LW22 S-protein homolog 215.7e-0935.16Show/hide
Query:  INRLSNGKLLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIY
        +N  +   L VHCKS++ DIG +Y+  G  + +SFK N WGTT FWC + K       ++ +   T +  +        +  W A+DDGIY
Subjt:  INRLSNGKLLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIY

Arabidopsis top hitse value%identityAlignment
AT1G28305.1 Plant self-incompatibility protein S1 family8.7e-1334.21Show/hide
Query:  VHVINRL----SNGKLLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIYLR
        +H+ N L     +  L V CKS   D+G+ YV  G   Q+  ++N W TTLFWC  +     + + + F    D Y         GT  WTA++DGIY R
Subjt:  VHVINRL----SNGKLLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIYLR

Query:  NIPDGIEERIHEWK
         +  G   ++H WK
Subjt:  NIPDGIEERIHEWK

AT4G16295.1 S-protein homologue 11.9e-2038.98Show/hide
Query:  VEKWHVHVINRLSNGK-LLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIY
        + +W V V+N L+ G+ L +HCKS++ D+GE  +       W+F EN+  +T FWC+M K NG   +  VFW   D   L +RC  +  C+WTAK DG+Y
Subjt:  VEKWHVHVINRLSNGK-LLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIY

Query:  LRNIPDGIEERIHEWKRG
        L N   G +    +W+ G
Subjt:  LRNIPDGIEERIHEWKRG

AT4G29035.1 Plant self-incompatibility protein S1 family5.6e-2038.98Show/hide
Query:  VEKWHVHVINRLSNGK-LLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIY
        + +W V V N L+ G+ L +HCKS++ D+G+  +       W+F EN+  +TLFWC+M K +G   + +VFW   D   L +RC  +  C+WTAK+DG+Y
Subjt:  VEKWHVHVINRLSNGK-LLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIY

Query:  LRNIPDGIEERIHEWKRG
        L N   G +    +WK G
Subjt:  LRNIPDGIEERIHEWKRG

AT5G04347.1 Plant self-incompatibility protein S1 family1.6e-1131.19Show/hide
Query:  VINRLSNGKLLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIYLRNIPDGI
        V N L+N  L V C+S+D ++G+  +  G   + +F +NVW  TLFWC + K    F     F    D Y   ++  +    LW A++DGIY    P+  
Subjt:  VINRLSNGKLLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKKPNGSFASFEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIYLRNIPDGI

Query:  EERIHEWKR
         ++ ++W +
Subjt:  EERIHEWKR

AT5G04350.1 Plant self-incompatibility protein S1 family3.3e-1233.65Show/hide
Query:  NRLSNGKLL-VHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMK-----KPNGSFASFEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIYLRNI
        N+L + KLL VHC+S+D D+GE  +  G + +++F +N+W TT F C M      K +  F ++E  W +           L+ +C W  ++DGIY    
Subjt:  NRLSNGKLL-VHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMK-----KPNGSFASFEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIYLRNI

Query:  PDGI
         DG+
Subjt:  PDGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCATATGTCCCAACATCTCAATTACAATACAAAGGGAAAGGGAAAATGGGTAGAAGTTTGAGTTATTTGGTTGTGTTAATGAGTGTATTATTGGTGGTTGTTCA
TGAGCAATATTTATTTGTGGGAGCGGTTCTTCCTCCAGCGTTCGTTGAAAAATGGCACGTTCATGTGATTAATAGGCTGAGTAATGGAAAATTACTTGTGCATTGTAAAT
CAAGAGATACTGATATTGGAGAACAATATGTCAATCAAGGGGGTGAGATTCAATGGAGTTTCAAGGAAAATGTTTGGGGAACAACTTTGTTTTGGTGTTTTATGAAGAAA
CCAAATGGTAGCTTTGCCTCTTTTGAGGTATTTTGGCATGAAACTGACCATTATTGGCTTCATTATAGGTGCACTTTACAAGGAACTTGTTTATGGACGGCTAAAGATGA
TGGAATTTACTTGAGAAATATTCCCGATGGAATTGAAGAAAGGATTCATGAATGGAAGAGGGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTCATATGTCCCAACATCTCAATTACAATACAAAGGGAAAGGGAAAATGGGTAGAAGTTTGAGTTATTTGGTTGTGTTAATGAGTGTATTATTGGTGGTTGTTCA
TGAGCAATATTTATTTGTGGGAGCGGTTCTTCCTCCAGCGTTCGTTGAAAAATGGCACGTTCATGTGATTAATAGGCTGAGTAATGGAAAATTACTTGTGCATTGTAAAT
CAAGAGATACTGATATTGGAGAACAATATGTCAATCAAGGGGGTGAGATTCAATGGAGTTTCAAGGAAAATGTTTGGGGAACAACTTTGTTTTGGTGTTTTATGAAGAAA
CCAAATGGTAGCTTTGCCTCTTTTGAGGTATTTTGGCATGAAACTGACCATTATTGGCTTCATTATAGGTGCACTTTACAAGGAACTTGTTTATGGACGGCTAAAGATGA
TGGAATTTACTTGAGAAATATTCCCGATGGAATTGAAGAAAGGATTCATGAATGGAAGAGGGGATAG
Protein sequenceShow/hide protein sequence
MDSYVPTSQLQYKGKGKMGRSLSYLVVLMSVLLVVVHEQYLFVGAVLPPAFVEKWHVHVINRLSNGKLLVHCKSRDTDIGEQYVNQGGEIQWSFKENVWGTTLFWCFMKK
PNGSFASFEVFWHETDHYWLHYRCTLQGTCLWTAKDDGIYLRNIPDGIEERIHEWKRG