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Lsi02G020560 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G020560
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-protein homolog
Genome locationchr02:26711457..26711909
RNA-Seq ExpressionLsi02G020560
SyntenyLsi02G020560
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139670.2 S-protein homolog 74 [Cucumis sativus]6.7e-6781.33Show/hide
Query:  MSTISFKDQLLVFMVVSVSVSTLALARSKPLSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDA
        M  ISFKDQLLVF+    +VSTLAL  SKPLS WEIHIKNGLS+GQALF+HCKSKDSDLGE++LSTGAEFKWNFKVNIWDTTLFWCYLRKP G ++RF+A
Subjt:  MSTISFKDQLLVFMVVSVSVSTLALARSKPLSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDA

Query:  FWVEKKTEWLRVKCDGHICNWTAEDNGIYLKDNSSNEDEFIHYWKFPATK
        FWVEKKT WLRVKCDG+ICNW AED GIYLKDNS+NEDE IHYWKF  TK
Subjt:  FWVEKKTEWLRVKCDGHICNWTAEDNGIYLKDNSSNEDEFIHYWKFPATK

XP_008458036.1 PREDICTED: pumilio homolog 15-like [Cucumis melo]1.1e-7488Show/hide
Query:  MSTISFKDQLLVFMVVSVSVSTLALARSKPLSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDA
        M  ISFKDQLLVF+V    VSTLALA SKPLS+WEIHIKNGLSNGQALF+ CKSKDSDLG+Q+LSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHE++FDA
Subjt:  MSTISFKDQLLVFMVVSVSVSTLALARSKPLSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDA

Query:  FWVEKKTEWLRVKCDGHICNWTAEDNGIYLKDNSSNEDEFIHYWKFPATK
        FWVEKKTEWLRVKCDG+ICNWT EDNGIYLKDNS+NEDEFIHYWKFPATK
Subjt:  FWVEKKTEWLRVKCDGHICNWTAEDNGIYLKDNSSNEDEFIHYWKFPATK

XP_011659760.2 S-protein homolog 74-like [Cucumis sativus]5.0e-7084Show/hide
Query:  MSTISFKDQLLVFMVVSVSVSTLALARSKPLSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDA
        M  ISFKDQLLVF+V    VSTLALARSKPLS WEIHIKNGLS+G+ALF+ CKSKDSDLGE++LSTGAEFKWNFKVNIWDTTLFWCYLRKPNG ++RFDA
Subjt:  MSTISFKDQLLVFMVVSVSVSTLALARSKPLSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDA

Query:  FWVEKKTEWLRVKCDGHICNWTAEDNGIYLKDNSSNEDEFIHYWKFPATK
        FWVEKKTEWLRVKCDG+ICNW AEDNGIYLKDNS+NE+EFIHYWKF  +K
Subjt:  FWVEKKTEWLRVKCDGHICNWTAEDNGIYLKDNSSNEDEFIHYWKFPATK

XP_022960229.1 S-protein homolog 74-like [Cucurbita moschata]3.3e-6678.38Show/hide
Query:  MSTISFKDQLLVFMVVSVSVSTLALARSKPLSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDA
        M+ IS K+Q+LVF+V     S LALA SKP S WEIHIKN LSNGQA+F+HCKSKD+DLGE +L+TG EFKW+FKVN WDTTLFWCYLRKPNGHEM FDA
Subjt:  MSTISFKDQLLVFMVVSVSVSTLALARSKPLSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDA

Query:  FWVEKKTEWLRVKCDGHICNWTAEDNGIYLKDNSSNEDEFIHYWKFPA
        FWVEK+TEWLRVKCDG+ICNWTAEDNGIYLKDNS N DEF+HYWKFP+
Subjt:  FWVEKKTEWLRVKCDGHICNWTAEDNGIYLKDNSSNEDEFIHYWKFPA

XP_038896413.1 S-protein homolog 1-like [Benincasa hispida]7.2e-6982.67Show/hide
Query:  MSTISFKDQLLVFMVVSVSVSTLALARSKPLSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDA
        M  I FKD+L V +V+S      ALA  KPLSAWEIHIKNGLSNGQALF+HCKSKD+DLGEQ+LSTGAEFKW FKVNIW TTLFWCYLRKPNGHEM FDA
Subjt:  MSTISFKDQLLVFMVVSVSVSTLALARSKPLSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDA

Query:  FWVEKKTEWLRVKCDGHICNWTAEDNGIYLKDNSSNEDEFIHYWKFPATK
        FWVEKKTEWLRVKCD  ICNWTAEDNGIYLKDNSSN+DEFIH+WKFPATK
Subjt:  FWVEKKTEWLRVKCDGHICNWTAEDNGIYLKDNSSNEDEFIHYWKFPATK

TrEMBL top hitse value%identityAlignment
A0A0A0K6N8 S-protein homolog3.2e-6781.33Show/hide
Query:  MSTISFKDQLLVFMVVSVSVSTLALARSKPLSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDA
        M  ISFKDQLLVF+    +VSTLAL  SKPLS WEIHIKNGLS+GQALF+HCKSKDSDLGE++LSTGAEFKWNFKVNIWDTTLFWCYLRKP G ++RF+A
Subjt:  MSTISFKDQLLVFMVVSVSVSTLALARSKPLSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDA

Query:  FWVEKKTEWLRVKCDGHICNWTAEDNGIYLKDNSSNEDEFIHYWKFPATK
        FWVEKKT WLRVKCDG+ICNW AED GIYLKDNS+NEDE IHYWKF  TK
Subjt:  FWVEKKTEWLRVKCDGHICNWTAEDNGIYLKDNSSNEDEFIHYWKFPATK

A0A1S3C711 S-protein homolog5.5e-7588Show/hide
Query:  MSTISFKDQLLVFMVVSVSVSTLALARSKPLSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDA
        M  ISFKDQLLVF+V    VSTLALA SKPLS+WEIHIKNGLSNGQALF+ CKSKDSDLG+Q+LSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHE++FDA
Subjt:  MSTISFKDQLLVFMVVSVSVSTLALARSKPLSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDA

Query:  FWVEKKTEWLRVKCDGHICNWTAEDNGIYLKDNSSNEDEFIHYWKFPATK
        FWVEKKTEWLRVKCDG+ICNWT EDNGIYLKDNS+NEDEFIHYWKFPATK
Subjt:  FWVEKKTEWLRVKCDGHICNWTAEDNGIYLKDNSSNEDEFIHYWKFPATK

A0A5D3E4D8 S-protein homolog5.5e-7588Show/hide
Query:  MSTISFKDQLLVFMVVSVSVSTLALARSKPLSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDA
        M  ISFKDQLLVF+V    VSTLALA SKPLS+WEIHIKNGLSNGQALF+ CKSKDSDLG+Q+LSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHE++FDA
Subjt:  MSTISFKDQLLVFMVVSVSVSTLALARSKPLSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDA

Query:  FWVEKKTEWLRVKCDGHICNWTAEDNGIYLKDNSSNEDEFIHYWKFPATK
        FWVEKKTEWLRVKCDG+ICNWT EDNGIYLKDNS+NEDEFIHYWKFPATK
Subjt:  FWVEKKTEWLRVKCDGHICNWTAEDNGIYLKDNSSNEDEFIHYWKFPATK

A0A6J1HAC3 S-protein homolog1.6e-6678.38Show/hide
Query:  MSTISFKDQLLVFMVVSVSVSTLALARSKPLSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDA
        M+ IS K+Q+LVF+V     S LALA SKP S WEIHIKN LSNGQA+F+HCKSKD+DLGE +L+TG EFKW+FKVN WDTTLFWCYLRKPNGHEM FDA
Subjt:  MSTISFKDQLLVFMVVSVSVSTLALARSKPLSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDA

Query:  FWVEKKTEWLRVKCDGHICNWTAEDNGIYLKDNSSNEDEFIHYWKFPA
        FWVEK+TEWLRVKCDG+ICNWTAEDNGIYLKDNS N DEF+HYWKFP+
Subjt:  FWVEKKTEWLRVKCDGHICNWTAEDNGIYLKDNSSNEDEFIHYWKFPA

A0A6J1KS80 S-protein homolog7.5e-6474.32Show/hide
Query:  MSTISFKDQLLVFMVVSVSVSTLALARSKPLSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDA
        M+ I  K+Q+LVF+V     S LALA SKP S WEIHIKNGLSNGQA+F+HC+SKD+DLGE +L+T  EFKW+FKVN+WDTTL+WCYLRKPNGHEM FD+
Subjt:  MSTISFKDQLLVFMVVSVSVSTLALARSKPLSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDA

Query:  FWVEKKTEWLRVKCDGHICNWTAEDNGIYLKDNSSNEDEFIHYWKFPA
        FWVEK+T+WLRVKCD +ICNWTAEDNGIYLKDNS N DEF+HYWKFP+
Subjt:  FWVEKKTEWLRVKCDGHICNWTAEDNGIYLKDNSSNEDEFIHYWKFPA

SwissProt top hitse value%identityAlignment
F2Q9V5 S-protein homolog 161.9e-0835.48Show/hide
Query:  LLVFMVVSVSVSTLALARSKPLSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRK-PN-GHEMRFDAFWVEKKT
        LLVF+ V       +L     +S   I I N L   + L++ C SKD  LG + +  G  F   F VNIW TT F C L++ PN  H   F AF      
Subjt:  LLVFMVVSVSVSTLALARSKPLSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRK-PN-GHEMRFDAFWVEKKT

Query:  EWLRVKCDGHICNWTAEDNGIYLK
        +   ++  G + +W A +N IYLK
Subjt:  EWLRVKCDGHICNWTAEDNGIYLK

F4JLS0 S-protein homolog 11.1e-2242.61Show/hide
Query:  LSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDAFWVEKKTEWLRVKCDGHICNWTAEDNGIYL
        +S W++ + NGL+ G+ LFIHCKSK+ DLGE +L     F WNF  N+  +T FWCY+ K NGH M  + FW +     L  +C    C WTA+ +G+YL
Subjt:  LSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDAFWVEKKTEWLRVKCDGHICNWTAEDNGIYL

Query:  KDNSSNEDEFIHYWK
         +++S ED     W+
Subjt:  KDNSSNEDEFIHYWK

Q2HQ46 S-protein homolog 741.1e-2242.61Show/hide
Query:  LSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDAFWVEKKTEWLRVKCDGHICNWTAEDNGIYL
        +S W++ + NGL+ G+ LFIHCKSK++DLG+ +L     F WNF  N+  +TLFWCY+ K +GH M    FW +     L  +CD   C WTA+++G+YL
Subjt:  LSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDAFWVEKKTEWLRVKCDGHICNWTAEDNGIYL

Query:  KDNSSNEDEFIHYWK
         +++  ED     WK
Subjt:  KDNSSNEDEFIHYWK

Q40975 Self-incompatibility protein S11.1e-0827.93Show/hide
Query:  EIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDAFWVEKKTEWLRVKCDGHICNWTAEDNGIYLKDNS
        E+ I N   NG+++ IHC+SKD+DL  Q++++G +  ++F+ + + TT F+C L+     +  F ++  ++  +    +C    C W   D+G+Y  D  
Subjt:  EIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDAFWVEKKTEWLRVKCDGHICNWTAEDNGIYLKDNS

Query:  SNEDEFIHYWK
            +  H  K
Subjt:  SNEDEFIHYWK

Q9LW22 S-protein homolog 214.6e-1037.74Show/hide
Query:  IHIKNGLS--NGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRK-PNGHEMR----FDAFWVEKKTEWLRVKCDGHICNWTAEDNGI
        I +KN L+  N   L +HCKSK++D+G + L  G    ++FK N W TT FWC L K P+    R    + A  +  K        DG   NW A D+GI
Subjt:  IHIKNGLS--NGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRK-PNGHEMR----FDAFWVEKKTEWLRVKCDGHICNWTAEDNGI

Query:  YLKDNS
        Y   +S
Subjt:  YLKDNS

Arabidopsis top hitse value%identityAlignment
AT3G26880.1 Plant self-incompatibility protein S1 family3.3e-1137.74Show/hide
Query:  IHIKNGLS--NGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRK-PNGHEMR----FDAFWVEKKTEWLRVKCDGHICNWTAEDNGI
        I +KN L+  N   L +HCKSK++D+G + L  G    ++FK N W TT FWC L K P+    R    + A  +  K        DG   NW A D+GI
Subjt:  IHIKNGLS--NGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRK-PNGHEMR----FDAFWVEKKTEWLRVKCDGHICNWTAEDNGI

Query:  YLKDNS
        Y   +S
Subjt:  YLKDNS

AT4G16295.1 S-protein homologue 17.5e-2442.61Show/hide
Query:  LSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDAFWVEKKTEWLRVKCDGHICNWTAEDNGIYL
        +S W++ + NGL+ G+ LFIHCKSK+ DLGE +L     F WNF  N+  +T FWCY+ K NGH M  + FW +     L  +C    C WTA+ +G+YL
Subjt:  LSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDAFWVEKKTEWLRVKCDGHICNWTAEDNGIYL

Query:  KDNSSNEDEFIHYWK
         +++S ED     W+
Subjt:  KDNSSNEDEFIHYWK

AT4G29035.1 Plant self-incompatibility protein S1 family7.5e-2442.61Show/hide
Query:  LSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDAFWVEKKTEWLRVKCDGHICNWTAEDNGIYL
        +S W++ + NGL+ G+ LFIHCKSK++DLG+ +L     F WNF  N+  +TLFWCY+ K +GH M    FW +     L  +CD   C WTA+++G+YL
Subjt:  LSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDAFWVEKKTEWLRVKCDGHICNWTAEDNGIYL

Query:  KDNSSNEDEFIHYWK
         +++  ED     WK
Subjt:  KDNSSNEDEFIHYWK

AT5G04347.1 Plant self-incompatibility protein S1 family6.1e-1034.55Show/hide
Query:  IKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMR--FDAFWVEKKTEWLRVKCD-GHICNWTAEDNGIYLKDNS
        +KN L+N + L + C+SKD +LG+  L  G   K NF  N+W  TLFWC L K    ++   FDA+    +++W   K D G    W A ++GIY   + 
Subjt:  IKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMR--FDAFWVEKKTEWLRVKCD-GHICNWTAEDNGIYLKDNS

Query:  SNEDEFIHYW
            +  + W
Subjt:  SNEDEFIHYW

AT5G04350.1 Plant self-incompatibility protein S1 family2.5e-1134.65Show/hide
Query:  EIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYL-RKPN-GHEMRFDAFWVEKKTEWLRVKCDGHICNWTAEDNGIYLKD
        ++ + N L + + L +HC+SKD DLGE  L  G ++++ F  NIW TT F C + + PN  H + F A+    +T W   K     C W   ++GIY   
Subjt:  EIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYL-RKPN-GHEMRFDAFWVEKKTEWLRVKCDGHICNWTAEDNGIYLKD

Query:  N
        +
Subjt:  N


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCACTATCTCTTTCAAGGACCAACTTTTGGTCTTCATGGTCGTCTCGGTCTCGGTCTCGACCTTGGCCTTGGCTCGCTCGAAACCATTGAGCGCATGGGAGATCCA
CATCAAGAATGGATTGAGCAACGGGCAAGCGTTGTTCATTCATTGCAAATCGAAAGACTCCGACTTGGGCGAGCAAAGCCTTAGCACCGGAGCCGAGTTCAAGTGGAATT
TCAAAGTGAACATTTGGGATACGACATTGTTCTGGTGTTACTTACGTAAGCCGAACGGACATGAAATGAGGTTTGATGCTTTTTGGGTCGAGAAGAAGACCGAGTGGTTG
CGTGTCAAATGCGACGGTCATATTTGCAATTGGACTGCGGAAGACAATGGAATTTACCTCAAAGATAATAGTTCAAATGAAGATGAGTTCATCCATTATTGGAAATTTCC
AGCAACTAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCACTATCTCTTTCAAGGACCAACTTTTGGTCTTCATGGTCGTCTCGGTCTCGGTCTCGACCTTGGCCTTGGCTCGCTCGAAACCATTGAGCGCATGGGAGATCCA
CATCAAGAATGGATTGAGCAACGGGCAAGCGTTGTTCATTCATTGCAAATCGAAAGACTCCGACTTGGGCGAGCAAAGCCTTAGCACCGGAGCCGAGTTCAAGTGGAATT
TCAAAGTGAACATTTGGGATACGACATTGTTCTGGTGTTACTTACGTAAGCCGAACGGACATGAAATGAGGTTTGATGCTTTTTGGGTCGAGAAGAAGACCGAGTGGTTG
CGTGTCAAATGCGACGGTCATATTTGCAATTGGACTGCGGAAGACAATGGAATTTACCTCAAAGATAATAGTTCAAATGAAGATGAGTTCATCCATTATTGGAAATTTCC
AGCAACTAAGTAG
Protein sequenceShow/hide protein sequence
MSTISFKDQLLVFMVVSVSVSTLALARSKPLSAWEIHIKNGLSNGQALFIHCKSKDSDLGEQSLSTGAEFKWNFKVNIWDTTLFWCYLRKPNGHEMRFDAFWVEKKTEWL
RVKCDGHICNWTAEDNGIYLKDNSSNEDEFIHYWKFPATK