; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G020580 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G020580
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-protein homolog
Genome locationchr02:26735390..26735836
RNA-Seq ExpressionLsi02G020580
SyntenyLsi02G020580
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067970.1 uncharacterized protein E6C27_scaffold138G001560 [Cucumis melo var. makuwa]2.7e-6880.41Show/hide
Query:  MYEEKKHLTVILLLVVVAVMVVQPCTAVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEA
        MYEEK +L V++LLV+VAV VVQPCTAVPLPLP W IHVVNGLNNETLLVHCKSKDDDLG H+L +KGEEFQWTFKVNFFGTTLFWCYLQKPNF++SFE+
Subjt:  MYEEKKHLTVILLLVVVAVMVVQPCTAVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEA

Query:  FWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKIV
        FWVE +HPWL+SRCF  +CIWIAKDD +YLRNN  NVDE +H+WNKIV
Subjt:  FWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKIV

KAE8646232.1 hypothetical protein Csa_016625, partial [Cucumis sativus]2.3e-5173.13Show/hide
Query:  HLTVI-LLLVVVAVMVVQPCTAVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEAFWVES
        HL V+ LL+V+VA++VVQPC AVP+P P WHIHVVNGL+NETLLVHCKS DDDLG   L  +G EF WTF+V+ FG TLFWCYL+KPNF++SFE+FWVE 
Subjt:  HLTVI-LLLVVVAVMVVQPCTAVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEAFWVES

Query:  THPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDE
         H WL+SRC+DKNCIWIAKDDGIYLRNNP N+DE
Subjt:  THPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDE

XP_004139722.1 S-protein homolog 1-like [Cucumis sativus]2.0e-5572.54Show/hide
Query:  HLTVI-LLLVVVAVMVVQPCTAVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEAFWVES
        HL V+ LL+V+VA++VVQPC AVP+P P WHIHVVNGL+NETLLVHCKS DDDLG   L  +G EF WTF+V+ FG TLFWCYL+KPNF++SFE+FWVE 
Subjt:  HLTVI-LLLVVVAVMVVQPCTAVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEAFWVES

Query:  THPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKI
         H WL+SRC+DKNCIWIAKDDGIYLRNNP N+DE VH WNK+
Subjt:  THPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKI

XP_008461539.1 PREDICTED: uncharacterized protein LOC103500111 [Cucumis melo]5.1e-6779.73Show/hide
Query:  MYEEKKHLTVILLLVVVAVMVVQPCTAVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEA
        MYE+   L + LLLV+VAV++VQP TAVPLPLP WHIHVVNGL N+TL VHCKSKDDDLGNH+L+ KG+E QWTFKVNFFGTTLFWCYL+KPNF ++FE+
Subjt:  MYEEKKHLTVILLLVVVAVMVVQPCTAVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEA

Query:  FWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKIV
        FWVE THPWL+SRCFDKNCIWIAKDDGIYLRNN TNVDELVH WNK+V
Subjt:  FWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKIV

XP_008462114.1 PREDICTED: uncharacterized protein LOC103500542 [Cucumis melo]2.1e-5774.47Show/hide
Query:  HLTVILLLVVVAVMVVQPCTAVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEAFWVEST
        HL V+ LLV+VA++VVQPCTAVP+P P WHIHVVNGL+NETLLVHCKS+DDDLG   L  KG EF WTF+V+ FG TLFWCYL+KPNF++SFE+FWVE  
Subjt:  HLTVILLLVVVAVMVVQPCTAVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEAFWVEST

Query:  HPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKI
        H WL+SRC+DKNCIWIAKDDGIYLRNNP N++E VH WNKI
Subjt:  HPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKI

TrEMBL top hitse value%identityAlignment
A0A1S3CEQ0 S-protein homolog2.4e-6779.73Show/hide
Query:  MYEEKKHLTVILLLVVVAVMVVQPCTAVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEA
        MYE+   L + LLLV+VAV++VQP TAVPLPLP WHIHVVNGL N+TL VHCKSKDDDLGNH+L+ KG+E QWTFKVNFFGTTLFWCYL+KPNF ++FE+
Subjt:  MYEEKKHLTVILLLVVVAVMVVQPCTAVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEA

Query:  FWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKIV
        FWVE THPWL+SRCFDKNCIWIAKDDGIYLRNN TNVDELVH WNK+V
Subjt:  FWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKIV

A0A1S3CG89 S-protein homolog1.0e-5774.47Show/hide
Query:  HLTVILLLVVVAVMVVQPCTAVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEAFWVEST
        HL V+ LLV+VA++VVQPCTAVP+P P WHIHVVNGL+NETLLVHCKS+DDDLG   L  KG EF WTF+V+ FG TLFWCYL+KPNF++SFE+FWVE  
Subjt:  HLTVILLLVVVAVMVVQPCTAVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEAFWVEST

Query:  HPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKI
        H WL+SRC+DKNCIWIAKDDGIYLRNNP N++E VH WNKI
Subjt:  HPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKI

A0A5A7VL75 S-protein homolog1.3e-6880.41Show/hide
Query:  MYEEKKHLTVILLLVVVAVMVVQPCTAVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEA
        MYEEK +L V++LLV+VAV VVQPCTAVPLPLP W IHVVNGLNNETLLVHCKSKDDDLG H+L +KGEEFQWTFKVNFFGTTLFWCYLQKPNF++SFE+
Subjt:  MYEEKKHLTVILLLVVVAVMVVQPCTAVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEA

Query:  FWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKIV
        FWVE +HPWL+SRCF  +CIWIAKDD +YLRNN  NVDE +H+WNKIV
Subjt:  FWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKIV

A0A6J1CPC6 S-protein homolog4.6e-5063.27Show/hide
Query:  MYEEKKHLTVILLLVVVAVMVVQPCTAVPLP---LPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNIS
        MY + + +TV++ LV     V+Q  TA  L    LP WHIHVVNGL+  TL VHCKSKDDDLG H+L  +G+EFQWTF+VNF+ TTL+WCYL+KPN ++S
Subjt:  MYEEKKHLTVILLLVVVAVMVVQPCTAVPLP---LPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNIS

Query:  FEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQW
        FE+FWVE TH WL  RC DKNCIW AKDDGIYLRNNP  VDE +H+W
Subjt:  FEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQW

A0A6J1DPJ1 S-protein homolog2.9e-4460.71Show/hide
Query:  VILLLVVVAVMVVQP---CTAVPLPLPTWHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEAFWVES
        ++LL+  V ++VV+P      +P+PL  W+IHVVNGL NN TL VHCKSKDDDLG H L  +G+E QWTF++NF+ TTL+WC++ KPN ++SF++FWVE 
Subjt:  VILLLVVVAVMVVQP---CTAVPLPLPTWHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEAFWVES

Query:  THPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWN
        TH WL+ RC D  CIW AKDDGIYLRN P N DELVH+WN
Subjt:  THPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWN

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 66.5e-0932.35Show/hide
Query:  VILLLVVVAVMVVQPCTAVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWC-YLQKPNFNISFEAFWVESTHP
        ++L+ ++    +       P+  P   + + N  N+  L VHCKS+DDD G H L  KG  + W F VNF  +TL++C + Q+      F+ +       
Subjt:  VILLLVVVAVMVVQPCTAVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWC-YLQKPNFNISFEAFWVESTHP

Query:  WLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQW
          SSRC  +NC W AK+DGIY        + L ++W
Subjt:  WLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQW

F4JLQ5 S-protein homolog 27.5e-1330.13Show/hide
Query:  KKHLTVILLLVVVAVMVVQPCTAVPLPLPT-------------WHIHVVNGLNNE-TLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQ
        K++L++ +L++ +   + Q      +P+P                + + N L N+ TLL HCKSKDDDLGN +L   GE + ++F   FFG TL++C   
Subjt:  KKHLTVILLLVVVAVMVVQPCTAVPLPLPT-------------WHIHVVNGLNNE-TLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQ

Query:  KPNFNISFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNK
         PN + SF+  + +       ++C    C+W  + +G    N+ T   +L + WNK
Subjt:  KPNFNISFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNK

F4JLS0 S-protein homolog 18.8e-2245.05Show/hide
Query:  WHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNN
        W + VVNGL   ETL +HCKSK+DDLG  +L  +   F W F  N   +T FWCY+ K N +++   FW +     L  RC  KNCIW AK DG+YL N+
Subjt:  WHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNN

Query:  PTNVDELVHQW
         +  D L  +W
Subjt:  PTNVDELVHQW

P0DN92 S-protein homolog 245.9e-1039.42Show/hide
Query:  NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNIS-FEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVH
        N+  L +HCKS+DDDLG H L AKGE F W F VNF  +TL++C   +       FE +           RC   NC W A+ DGIY  +       L +
Subjt:  NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNIS-FEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVH

Query:  QWNK
         W K
Subjt:  QWNK

Q2HQ46 S-protein homolog 741.7e-2042.34Show/hide
Query:  WHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNN
        W + V NGL   ETL +HCKSK++DLG+ +L    + F W F  N   +TLFWCY+ K + +++ + FW +     L  RC  KNC+W AK+DG+YL N+
Subjt:  WHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNN

Query:  PTNVDELVHQW
            D L  +W
Subjt:  PTNVDELVHQW

Arabidopsis top hitse value%identityAlignment
AT2G06090.1 Plant self-incompatibility protein S1 family3.9e-0933.87Show/hide
Query:  VILLLVVVAVMVVQPCTAVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQK---PNFNISFEAFWVEST
        + +LL+++A+ V     +   P    H       N + L VHCKSKDDDLG H++ A+  E+ + F+ + FG T F+C L       ++++F A+  ++ 
Subjt:  VILLLVVVAVMVVQPCTAVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQK---PNFNISFEAFWVEST

Query:  HPWLSSRCFDKNCIWIAKDDGIYL
          +++S    K  IW A DDGIYL
Subjt:  HPWLSSRCFDKNCIWIAKDDGIYL

AT4G16195.1 Plant self-incompatibility protein S1 family5.3e-1430.13Show/hide
Query:  KKHLTVILLLVVVAVMVVQPCTAVPLPLPT-------------WHIHVVNGLNNE-TLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQ
        K++L++ +L++ +   + Q      +P+P                + + N L N+ TLL HCKSKDDDLGN +L   GE + ++F   FFG TL++C   
Subjt:  KKHLTVILLLVVVAVMVVQPCTAVPLPLPT-------------WHIHVVNGLNNE-TLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQ

Query:  KPNFNISFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNK
         PN + SF+  + +       ++C    C+W  + +G    N+ T   +L + WNK
Subjt:  KPNFNISFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNK

AT4G16295.1 S-protein homologue 16.2e-2345.05Show/hide
Query:  WHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNN
        W + VVNGL   ETL +HCKSK+DDLG  +L  +   F W F  N   +T FWCY+ K N +++   FW +     L  RC  KNCIW AK DG+YL N+
Subjt:  WHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNN

Query:  PTNVDELVHQW
         +  D L  +W
Subjt:  PTNVDELVHQW

AT4G29035.1 Plant self-incompatibility protein S1 family1.2e-2142.34Show/hide
Query:  WHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNN
        W + V NGL   ETL +HCKSK++DLG+ +L    + F W F  N   +TLFWCY+ K + +++ + FW +     L  RC  KNC+W AK+DG+YL N+
Subjt:  WHIHVVNGL-NNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEAFWVESTHPWLSSRCFDKNCIWIAKDDGIYLRNN

Query:  PTNVDELVHQW
            D L  +W
Subjt:  PTNVDELVHQW

AT5G04347.1 Plant self-incompatibility protein S1 family2.2e-1236.84Show/hide
Query:  VVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQK-PNF--NISFEAF---WVESTHPWLSSRCFDKNCIWIAKDDGIYLRN
        V N LNN+ L V C+SKDD+LG+H L   G+  +  F  N +  TLFWC L K P+F  +++F+A+   W     P           +WIA++DGIY   
Subjt:  VVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQK-PNF--NISFEAF---WVESTHPWLSSRCFDKNCIWIAKDDGIYLRN

Query:  NPTNVDELVHQWNK
        +P    +  + W K
Subjt:  NPTNVDELVHQWNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGAAGAAAAGAAGCATTTGACAGTTATTCTCTTACTTGTGGTTGTGGCTGTGATGGTGGTTCAACCGTGCACGGCGGTTCCATTGCCACTCCCAACGTGGCACAT
TCATGTGGTAAATGGGTTGAACAATGAAACCCTATTAGTTCATTGTAAATCCAAAGATGATGATTTGGGAAATCACAGTTTGGCTGCCAAAGGAGAAGAATTCCAATGGA
CATTTAAGGTCAATTTTTTTGGAACAACGTTGTTTTGGTGCTACCTACAAAAGCCAAATTTTAACATATCGTTTGAAGCTTTTTGGGTTGAAAGTACTCACCCTTGGCTC
TCTTCTAGATGCTTTGACAAAAATTGTATTTGGATTGCTAAAGATGATGGAATTTATTTGAGAAACAATCCTACAAATGTTGATGAACTTGTACATCAGTGGAACAAAAT
TGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATGAAGAAAAGAAGCATTTGACAGTTATTCTCTTACTTGTGGTTGTGGCTGTGATGGTGGTTCAACCGTGCACGGCGGTTCCATTGCCACTCCCAACGTGGCACAT
TCATGTGGTAAATGGGTTGAACAATGAAACCCTATTAGTTCATTGTAAATCCAAAGATGATGATTTGGGAAATCACAGTTTGGCTGCCAAAGGAGAAGAATTCCAATGGA
CATTTAAGGTCAATTTTTTTGGAACAACGTTGTTTTGGTGCTACCTACAAAAGCCAAATTTTAACATATCGTTTGAAGCTTTTTGGGTTGAAAGTACTCACCCTTGGCTC
TCTTCTAGATGCTTTGACAAAAATTGTATTTGGATTGCTAAAGATGATGGAATTTATTTGAGAAACAATCCTACAAATGTTGATGAACTTGTACATCAGTGGAACAAAAT
TGTTTGA
Protein sequenceShow/hide protein sequence
MYEEKKHLTVILLLVVVAVMVVQPCTAVPLPLPTWHIHVVNGLNNETLLVHCKSKDDDLGNHSLAAKGEEFQWTFKVNFFGTTLFWCYLQKPNFNISFEAFWVESTHPWL
SSRCFDKNCIWIAKDDGIYLRNNPTNVDELVHQWNKIV