; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G020600 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G020600
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-protein homolog
Genome locationchr02:26755997..26756440
RNA-Seq ExpressionLsi02G020600
SyntenyLsi02G020600
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592857.1 S-protein-like 1, partial [Cucurbita argyrosperma subsp. sororia]4.7e-4152.38Show/hide
Query:  MGVLKKPLGFITIVALVLLRSSMVALGAWSLLTWRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDV
        MG L+ PL  + +  L L+  S VA+G+W L TW V +VNGL  G+TL  HCKS++DD+G   + +G  + F+F  N W TT FWC L KPNN HA+FDV
Subjt:  MGVLKKPLGFITIVALVLLRSSMVALGAWSLLTWRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDV

Query:  YWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIKNIPLNQDEFVHPWE
        YW++ S  + WL+TRC    C+WI K DG+YIKN   NQDE VHPWE
Subjt:  YWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIKNIPLNQDEFVHPWE

XP_022143641.1 S-protein homolog 1-like [Momordica charantia]4.7e-4156.43Show/hide
Query:  PLGFITIVALVLLRSSMVALGAWSLLTWRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDVYWFEGS
        P   + +VA+VL+ SS     +     WRVDIVNGLS+G+TLF+HCKS+DDDLG H L  G KFG++F  N WGTTLFWCY+RKP+N +A+F+VYW +  
Subjt:  PLGFITIVALVLLRSSMVALGAWSLLTWRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDVYWFEGS

Query:  TLNHWLFTRCSWSDCIWIAKVDGIYIKNIPLNQDEFVHPW
        +   WL+  C+W DCIW AK DGIYIKNI  N+DE  H W
Subjt:  TLNHWLFTRCSWSDCIWIAKVDGIYIKNIPLNQDEFVHPW

XP_022143694.1 S-protein homolog 1-like [Momordica charantia]2.5e-5062.16Show/hide
Query:  MGVLKKPLGFITIVALVLLRSSMVALGAW-SLLTWRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFD
        MG LK+PLGF+ +VALVLL  S +A  AW S  TW V+IVN L++ +TLFVHC+S+DDDLG+H +  GT++ F+F  N WGTTLFWCYLRKPNN HA FD
Subjt:  MGVLKKPLGFITIVALVLLRSSMVALGAW-SLLTWRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFD

Query:  VYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIKNIPLNQDEFVHPWE
        VYW +     +WL+TRC+W  CIWIAK DGIYIK+IP+NQD+ +H WE
Subjt:  VYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIKNIPLNQDEFVHPWE

XP_022152463.1 S-protein homolog 1-like [Momordica charantia]1.8e-5669.39Show/hide
Query:  MGVLKKPLGFITIVALVLLRSSMVALGAWSLLTWRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDV
        MG +KKPLGF+ +VALVLL  S VAL  W + TW VDIVN LSNG+ LFVHCKS+DDDLG+H L SG ++GF+F  N W TTLFWCYLRKP+N HAAFDV
Subjt:  MGVLKKPLGFITIVALVLLRSSMVALGAWSLLTWRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDV

Query:  YWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIKNIPLNQDEFVHPWE
        YW++ S   HWL+TRC + +CIWIAK DGIYIKNIP NQDE VHPWE
Subjt:  YWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIKNIPLNQDEFVHPWE

XP_023005093.1 S-protein homolog 1-like [Cucurbita maxima]3.6e-4153.74Show/hide
Query:  MGVLKKPLGFITIVALVLLRSSMVALGAWSLLTWRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDV
        MG L+  L  + +  L L+  S VA+G+W L  W V +VNGL  G+TL  HCKS++DDLG H L +G  F F+F  N W TT FWC L KPNN HA+FDV
Subjt:  MGVLKKPLGFITIVALVLLRSSMVALGAWSLLTWRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDV

Query:  YWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIKNIPLNQDEFVHPWE
        YW++ S  + WL+TRC    C+WI K DG+YIKN   NQDE VHPWE
Subjt:  YWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIKNIPLNQDEFVHPWE

TrEMBL top hitse value%identityAlignment
A0A6J1CQ33 S-protein homolog1.2e-5062.16Show/hide
Query:  MGVLKKPLGFITIVALVLLRSSMVALGAW-SLLTWRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFD
        MG LK+PLGF+ +VALVLL  S +A  AW S  TW V+IVN L++ +TLFVHC+S+DDDLG+H +  GT++ F+F  N WGTTLFWCYLRKPNN HA FD
Subjt:  MGVLKKPLGFITIVALVLLRSSMVALGAW-SLLTWRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFD

Query:  VYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIKNIPLNQDEFVHPWE
        VYW +     +WL+TRC+W  CIWIAK DGIYIK+IP+NQD+ +H WE
Subjt:  VYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIKNIPLNQDEFVHPWE

A0A6J1CQW3 S-protein homolog2.3e-4156.43Show/hide
Query:  PLGFITIVALVLLRSSMVALGAWSLLTWRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDVYWFEGS
        P   + +VA+VL+ SS     +     WRVDIVNGLS+G+TLF+HCKS+DDDLG H L  G KFG++F  N WGTTLFWCY+RKP+N +A+F+VYW +  
Subjt:  PLGFITIVALVLLRSSMVALGAWSLLTWRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDVYWFEGS

Query:  TLNHWLFTRCSWSDCIWIAKVDGIYIKNIPLNQDEFVHPW
        +   WL+  C+W DCIW AK DGIYIKNI  N+DE  H W
Subjt:  TLNHWLFTRCSWSDCIWIAKVDGIYIKNIPLNQDEFVHPW

A0A6J1DEX4 S-protein homolog8.7e-5769.39Show/hide
Query:  MGVLKKPLGFITIVALVLLRSSMVALGAWSLLTWRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDV
        MG +KKPLGF+ +VALVLL  S VAL  W + TW VDIVN LSNG+ LFVHCKS+DDDLG+H L SG ++GF+F  N W TTLFWCYLRKP+N HAAFDV
Subjt:  MGVLKKPLGFITIVALVLLRSSMVALGAWSLLTWRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDV

Query:  YWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIKNIPLNQDEFVHPWE
        YW++ S   HWL+TRC + +CIWIAK DGIYIKNIP NQDE VHPWE
Subjt:  YWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIKNIPLNQDEFVHPWE

A0A6J1H5A3 S-protein homolog1.9e-4051.7Show/hide
Query:  MGVLKKPLGFITIVALVLLRSSMVALGAWSLLTWRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDV
        MG L+  L  + +  L L+  S VA+G+W L TW V +VNGL  G+TL  HCKS++DD+G   + +G  + F+F  N W TT FWC L KPNN HA+FDV
Subjt:  MGVLKKPLGFITIVALVLLRSSMVALGAWSLLTWRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDV

Query:  YWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIKNIPLNQDEFVHPWE
        YW++ S  + WL+TRC    C+WI K DG+YIKN   NQDE VHPWE
Subjt:  YWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIKNIPLNQDEFVHPWE

A0A6J1L199 S-protein homolog1.8e-4153.74Show/hide
Query:  MGVLKKPLGFITIVALVLLRSSMVALGAWSLLTWRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDV
        MG L+  L  + +  L L+  S VA+G+W L  W V +VNGL  G+TL  HCKS++DDLG H L +G  F F+F  N W TT FWC L KPNN HA+FDV
Subjt:  MGVLKKPLGFITIVALVLLRSSMVALGAWSLLTWRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDV

Query:  YWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIKNIPLNQDEFVHPWE
        YW++ S  + WL+TRC    C+WI K DG+YIKN   NQDE VHPWE
Subjt:  YWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIKNIPLNQDEFVHPWE

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 61.0e-0939.18Show/hide
Query:  RVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDVYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIY
        RV I N   N   L VHCKS DDD G H L+ G  +G+ F  NF  +TL++C   +       FD+Y     +      +RC   +C W AK DGIY
Subjt:  RVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDVYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIY

F4JLQ5 S-protein homolog 21.1e-1336.04Show/hide
Query:  VDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDVYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIKNI
        V+I N L N  TL  HCKS+DDDLG   L+ G  + FSF   F+G TL++C    PN  H +FD+Y     +       +C    C+W  + +G    N 
Subjt:  VDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDVYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIKNI

Query:  PLNQDEFVHPW
           Q +  +PW
Subjt:  PLNQDEFVHPW

F4JLS0 S-protein homolog 11.5e-2645.61Show/hide
Query:  WRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDVYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIK
        W+V +VNGL+ GETLF+HCKS++DDLG+  LK   +F ++F  N   +T FWCY+ K +NGH   +V+W +       LF RC W +CIW AK DG+Y+ 
Subjt:  WRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDVYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIK

Query:  NIPLNQDEFVHPWE
        N    +D     WE
Subjt:  NIPLNQDEFVHPWE

P0DN92 S-protein homolog 247.7e-1039.18Show/hide
Query:  RVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDVYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIY
        RV I N   N   L +HCKS DDDLG H L  G  FG+ F  NF  +TL++C   +       F++Y           F RC  ++C W A+ DGIY
Subjt:  RVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDVYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIY

Q2HQ46 S-protein homolog 745.5e-2442.11Show/hide
Query:  WRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDVYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIK
        W+V + NGL+ GETLF+HCKS+++DLG   LK   +F ++F  N   +TLFWCY+ K ++GH    V+W +       LF RC W +C+W AK DG+Y+ 
Subjt:  WRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDVYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIK

Query:  NIPLNQDEFVHPWE
        N  + +D     W+
Subjt:  NIPLNQDEFVHPWE

Arabidopsis top hitse value%identityAlignment
AT1G28305.1 Plant self-incompatibility protein S1 family2.4e-1137.5Show/hide
Query:  LFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAA--FDVYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIKNIPLNQDEF--V
        LFV CKS   D+GKH +K G  + F    NFW TTLFWC  R   +      FDVY ++        +         W A+ DGIY +   LNQ     V
Subjt:  LFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAA--FDVYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIKNIPLNQDEF--V

Query:  HPWE
        H W+
Subjt:  HPWE

AT4G16195.1 Plant self-incompatibility protein S1 family8.1e-1536.04Show/hide
Query:  VDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDVYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIKNI
        V+I N L N  TL  HCKS+DDDLG   L+ G  + FSF   F+G TL++C    PN  H +FD+Y     +       +C    C+W  + +G    N 
Subjt:  VDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDVYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIKNI

Query:  PLNQDEFVHPW
           Q +  +PW
Subjt:  PLNQDEFVHPW

AT4G16295.1 S-protein homologue 11.1e-2745.61Show/hide
Query:  WRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDVYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIK
        W+V +VNGL+ GETLF+HCKS++DDLG+  LK   +F ++F  N   +T FWCY+ K +NGH   +V+W +       LF RC W +CIW AK DG+Y+ 
Subjt:  WRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDVYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIK

Query:  NIPLNQDEFVHPWE
        N    +D     WE
Subjt:  NIPLNQDEFVHPWE

AT4G29035.1 Plant self-incompatibility protein S1 family3.9e-2542.11Show/hide
Query:  WRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDVYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIK
        W+V + NGL+ GETLF+HCKS+++DLG   LK   +F ++F  N   +TLFWCY+ K ++GH    V+W +       LF RC W +C+W AK DG+Y+ 
Subjt:  WRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDVYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIYIK

Query:  NIPLNQDEFVHPWE
        N  + +D     W+
Subjt:  NIPLNQDEFVHPWE

AT5G04350.1 Plant self-incompatibility protein S1 family1.7e-1237.11Show/hide
Query:  RVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDVYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIY
        +V + N L + + L VHC+S+DDDLG+H LK G  + F+F  N W TT F C + +  N     D   +E S      +++   + C WI + DGIY
Subjt:  RVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDVYWFEGSTLNHWLFTRCSWSDCIWIAKVDGIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTTCTCAAGAAACCATTGGGTTTCATTACAATTGTGGCTTTGGTCCTTCTTAGGTCTTCCATGGTAGCTTTAGGAGCTTGGTCATTACTAACATGGCGAGTCGA
CATCGTGAATGGGCTAAGCAATGGAGAAACATTGTTTGTTCATTGCAAGTCGGAAGACGACGATTTGGGAAAACACAAGCTGAAGAGTGGAACTAAGTTTGGTTTTAGTT
TCATACCAAATTTTTGGGGAACCACACTGTTTTGGTGCTACTTGAGGAAACCAAACAATGGCCATGCTGCTTTTGATGTTTATTGGTTTGAAGGTAGCACACTTAATCAT
TGGCTTTTTACAAGATGCAGCTGGAGTGATTGTATTTGGATTGCTAAAGTGGATGGGATTTACATTAAAAATATCCCTTTGAATCAAGATGAGTTTGTTCACCCATGGGA
ATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGTTCTCAAGAAACCATTGGGTTTCATTACAATTGTGGCTTTGGTCCTTCTTAGGTCTTCCATGGTAGCTTTAGGAGCTTGGTCATTACTAACATGGCGAGTCGA
CATCGTGAATGGGCTAAGCAATGGAGAAACATTGTTTGTTCATTGCAAGTCGGAAGACGACGATTTGGGAAAACACAAGCTGAAGAGTGGAACTAAGTTTGGTTTTAGTT
TCATACCAAATTTTTGGGGAACCACACTGTTTTGGTGCTACTTGAGGAAACCAAACAATGGCCATGCTGCTTTTGATGTTTATTGGTTTGAAGGTAGCACACTTAATCAT
TGGCTTTTTACAAGATGCAGCTGGAGTGATTGTATTTGGATTGCTAAAGTGGATGGGATTTACATTAAAAATATCCCTTTGAATCAAGATGAGTTTGTTCACCCATGGGA
ATGA
Protein sequenceShow/hide protein sequence
MGVLKKPLGFITIVALVLLRSSMVALGAWSLLTWRVDIVNGLSNGETLFVHCKSEDDDLGKHKLKSGTKFGFSFIPNFWGTTLFWCYLRKPNNGHAAFDVYWFEGSTLNH
WLFTRCSWSDCIWIAKVDGIYIKNIPLNQDEFVHPWE