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Lsi02G020630 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G020630
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLate embryogenesis abundant protein (LEA) family protein
Genome locationchr02:26789379..26792486
RNA-Seq ExpressionLsi02G020630
SyntenyLsi02G020630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8543454.1 hypothetical protein F0562_021051 [Nyssa sinensis]6.7e-2352.53Show/hide
Query:  MASFLASSATLPKLHRAGSILVHSPWSSKVFVSVRPR-----------NASSQVAAAADGAAQAVKRA------TEKAAEEVKDK----AEEVTQKTKEV
        MAS +A + +L K H   +I+V SPWSS+VFV V PR            A+S    A+D A + V  A       +KA +++K+K    AE+V QKT++V
Subjt:  MASFLASSATLPKLHRAGSILVHSPWSSKVFVSVRPR-----------NASSQVAAAADGAAQAVKRA------TEKAAEEVKDK----AEEVTQKTKEV

Query:  AGKVSETAQDLAGKAKQTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQN
        AGKV+ETAQDLA KAKQT QDAWGSVKDTTQ IKE V GKAEESKE IK+ AE+ K++
Subjt:  AGKVSETAQDLAGKAKQTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQN

XP_008457975.1 PREDICTED: uncharacterized protein At4g13230 [Cucumis melo]1.4e-5286.71Show/hide
Query:  MASFLASSATLPKLHRAGSILVHSPWSSKVFVSVRPRNASSQVAAAADGAAQAVKRATEKAAEEVKDK----AEEVTQKTKEVAGKVSETAQDLAGKAKQ
        MASFLA+SATLPKL RAGSI+VH+PWSSKVFVS+RPR+ SSQV+AAADGAAQAVKR TEKAAEEVKDK    AEEVTQKTK+VAGKVSETAQD+AGKAKQ
Subjt:  MASFLASSATLPKLHRAGSILVHSPWSSKVFVSVRPRNASSQVAAAADGAAQAVKRATEKAAEEVKDK----AEEVTQKTKEVAGKVSETAQDLAGKAKQ

Query:  TVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQNKK
        TV+DAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAEN+K N K
Subjt:  TVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQNKK

XP_011659168.1 uncharacterized protein At4g13230 [Cucumis sativus]7.9e-4881.25Show/hide
Query:  MASFLASSATLPKLHRAGSILVHSPWSSKVFVSVRPRNASSQV-AAAADGAAQAVKRATEKAAEEVKDK----AEEVTQKTKEVAGKVSETAQDLAGKAK
        MASFLA+SAT+PKL RAGSI+VH+PWSS VFVS+RPR+ SSQV AAAAD AA  VKR TE+AAEEVKDK    A+EVTQ+TKEVAGKVSETAQD+AGKAK
Subjt:  MASFLASSATLPKLHRAGSILVHSPWSSKVFVSVRPRNASSQV-AAAADGAAQAVKRATEKAAEEVKDK----AEEVTQKTKEVAGKVSETAQDLAGKAK

Query:  QTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQNKK
        QTV+DAWGSVKDTTQNIK+KVVGKAEESKEAIKDTAEN+K+N K
Subjt:  QTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQNKK

XP_022152517.1 uncharacterized protein At4g13230 [Momordica charantia]1.0e-4782.88Show/hide
Query:  MASFLASSATLPKLHRAGSILVHSPWSSKVFVSVRPRNASSQ---VAAAADGAAQAVKRATEKAAEEVKDK----AEEVTQKTKEVAGKVSETAQDLAGK
        MAS LAS+AT+ KL+RAGS+LV SPWSS+VFVSVRPR+ASS     AAAADGAAQ VKRATEKAAEEVKDK    AEEVTQKTKEVAGKVSETAQDLAGK
Subjt:  MASFLASSATLPKLHRAGSILVHSPWSSKVFVSVRPRNASSQ---VAAAADGAAQAVKRATEKAAEEVKDK----AEEVTQKTKEVAGKVSETAQDLAGK

Query:  AKQTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQNKK
        AKQTVQ+AWGSVKDTTQNIKEKVVGKAEESKEAIKDTA+N+K   K
Subjt:  AKQTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQNKK

XP_038897424.1 uncharacterized protein At4g13230 [Benincasa hispida]1.9e-4986.11Show/hide
Query:  MASFLASSATLPKLHRAGSILVHSPWSSKVFVSVRPRNASSQV-AAAADGAAQAVKRATEKAAEEVKDK----AEEVTQKTKEVAGKVSETAQDLAGKAK
        MASFLA SATLPKLHRA SI V +PWSSKVFVSVRP++ SS+V AAAADGAAQ VKRATEKAAE+VKDK    A+EVTQKTKEVAGKVSETAQDLAGKAK
Subjt:  MASFLASSATLPKLHRAGSILVHSPWSSKVFVSVRPRNASSQV-AAAADGAAQAVKRATEKAAEEVKDK----AEEVTQKTKEVAGKVSETAQDLAGKAK

Query:  QTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQNKK
        QTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTA+NLK+N K
Subjt:  QTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQNKK

TrEMBL top hitse value%identityAlignment
A0A0A0K9U4 Uncharacterized protein3.8e-4881.25Show/hide
Query:  MASFLASSATLPKLHRAGSILVHSPWSSKVFVSVRPRNASSQV-AAAADGAAQAVKRATEKAAEEVKDK----AEEVTQKTKEVAGKVSETAQDLAGKAK
        MASFLA+SAT+PKL RAGSI+VH+PWSS VFVS+RPR+ SSQV AAAAD AA  VKR TE+AAEEVKDK    A+EVTQ+TKEVAGKVSETAQD+AGKAK
Subjt:  MASFLASSATLPKLHRAGSILVHSPWSSKVFVSVRPRNASSQV-AAAADGAAQAVKRATEKAAEEVKDK----AEEVTQKTKEVAGKVSETAQDLAGKAK

Query:  QTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQNKK
        QTV+DAWGSVKDTTQNIK+KVVGKAEESKEAIKDTAEN+K+N K
Subjt:  QTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQNKK

A0A1S3C7D4 uncharacterized protein At4g132306.7e-5386.71Show/hide
Query:  MASFLASSATLPKLHRAGSILVHSPWSSKVFVSVRPRNASSQVAAAADGAAQAVKRATEKAAEEVKDK----AEEVTQKTKEVAGKVSETAQDLAGKAKQ
        MASFLA+SATLPKL RAGSI+VH+PWSSKVFVS+RPR+ SSQV+AAADGAAQAVKR TEKAAEEVKDK    AEEVTQKTK+VAGKVSETAQD+AGKAKQ
Subjt:  MASFLASSATLPKLHRAGSILVHSPWSSKVFVSVRPRNASSQVAAAADGAAQAVKRATEKAAEEVKDK----AEEVTQKTKEVAGKVSETAQDLAGKAKQ

Query:  TVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQNKK
        TV+DAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAEN+K N K
Subjt:  TVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQNKK

A0A5B7AK94 Uncharacterized protein (Fragment)5.0e-2452.2Show/hide
Query:  MASFLASSATLPKLHRAGSILVHSPWSSKVFVSVRPR---------------NASSQVAAAADGAAQAVKRA---TEKAAEEVKDK----AEEVTQKTKE
        MAS +A + TL K      I V SPWSS+VFV + PR               +A ++ A AA+  A A K+     +K  +++K+K    AE+VT K+K+
Subjt:  MASFLASSATLPKLHRAGSILVHSPWSSKVFVSVRPR---------------NASSQVAAAADGAAQAVKRA---TEKAAEEVKDK----AEEVTQKTKE

Query:  VAGKVSETAQDLAGKAKQTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQN
        VAGKVSETAQDLA KAKQT QDAWGSVKDTTQ IKE V GKAEESK++IKD+AEN+K++
Subjt:  VAGKVSETAQDLAGKAKQTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQN

A0A5J5BL23 Uncharacterized protein3.3e-2352.53Show/hide
Query:  MASFLASSATLPKLHRAGSILVHSPWSSKVFVSVRPR-----------NASSQVAAAADGAAQAVKRA------TEKAAEEVKDK----AEEVTQKTKEV
        MAS +A + +L K H   +I+V SPWSS+VFV V PR            A+S    A+D A + V  A       +KA +++K+K    AE+V QKT++V
Subjt:  MASFLASSATLPKLHRAGSILVHSPWSSKVFVSVRPR-----------NASSQVAAAADGAAQAVKRA------TEKAAEEVKDK----AEEVTQKTKEV

Query:  AGKVSETAQDLAGKAKQTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQN
        AGKV+ETAQDLA KAKQT QDAWGSVKDTTQ IKE V GKAEESKE IK+ AE+ K++
Subjt:  AGKVSETAQDLAGKAKQTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQN

A0A6J1DGG7 uncharacterized protein At4g132305.0e-4882.88Show/hide
Query:  MASFLASSATLPKLHRAGSILVHSPWSSKVFVSVRPRNASSQ---VAAAADGAAQAVKRATEKAAEEVKDK----AEEVTQKTKEVAGKVSETAQDLAGK
        MAS LAS+AT+ KL+RAGS+LV SPWSS+VFVSVRPR+ASS     AAAADGAAQ VKRATEKAAEEVKDK    AEEVTQKTKEVAGKVSETAQDLAGK
Subjt:  MASFLASSATLPKLHRAGSILVHSPWSSKVFVSVRPRNASSQ---VAAAADGAAQAVKRATEKAAEEVKDK----AEEVTQKTKEVAGKVSETAQDLAGK

Query:  AKQTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQNKK
        AKQTVQ+AWGSVKDTTQNIKEKVVGKAEESKEAIKDTA+N+K   K
Subjt:  AKQTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQNKK

SwissProt top hitse value%identityAlignment
Q8LFD5 Uncharacterized protein At4g132304.1e-0743.18Show/hide
Query:  VKRATEKAAEEVKDKAEEVTQKTKEVAGKVSETAQDLAG----KAKQTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQN
        V   T    + V DKA E  QK  + A + ++T  D AG    KAK T ++AW  VKDTT+ IK+ V GK EE+KE+IK TA+ ++++
Subjt:  VKRATEKAAEEVKDKAEEVTQKTKEVAGKVSETAQDLAG----KAKQTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQN

Q9RV58 Protein DR_11724.3e-0432.69Show/hide
Query:  ASSQVAAAADGAAQAVKRATEKAAEEVKDKAEEVTQKTKEVAGKVSETAQDLAGKAKQTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQNK
        A+ Q    A   AQ V+   ++AA  VKDK ++V     + A +  + AQD+A   KQ  Q A    KD  Q++K      A+++K+  +D A+N+KQ+ 
Subjt:  ASSQVAAAADGAAQAVKRATEKAAEEVKDKAEEVTQKTKEVAGKVSETAQDLAGKAKQTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQNK

Query:  KHAE
        + A+
Subjt:  KHAE

Arabidopsis top hitse value%identityAlignment
AT4G13230.1 Late embryogenesis abundant protein (LEA) family protein2.9e-0843.18Show/hide
Query:  VKRATEKAAEEVKDKAEEVTQKTKEVAGKVSETAQDLAG----KAKQTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQN
        V   T    + V DKA E  QK  + A + ++T  D AG    KAK T ++AW  VKDTT+ IK+ V GK EE+KE+IK TA+ ++++
Subjt:  VKRATEKAAEEVKDKAEEVTQKTKEVAGKVSETAQDLAG----KAKQTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENLKQN

AT4G21020.1 Late embryogenesis abundant protein (LEA) family protein7.5e-0436.73Show/hide
Query:  AQAVKRATEKAAEEVKDKAEEVTQKTKEVAGKVSETAQDLAGKAKQTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAE----NLKQNKKHAEEK
        AQA K    + A +  DKA E  ++ K+ A +  E A+D A  AK+  +D     KD       K   KAE++KE  KD AE    N K+  +HA+EK
Subjt:  AQAVKRATEKAAEEVKDKAEEVTQKTKEVAGKVSETAQDLAGKAKQTVQDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAE----NLKQNKKHAEEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGCTTCTTGGCCTCGTCGGCAACTCTTCCAAAGCTTCATCGTGCTGGATCTATTCTTGTACACAGCCCATGGAGTTCTAAAGTTTTTGTCTCTGTCCGACCAAG
AAATGCAAGTTCACAGGTTGCTGCAGCAGCCGATGGAGCTGCTCAAGCTGTAAAGCGAGCCACTGAGAAGGCTGCTGAAGAAGTCAAAGATAAGGCTGAGGAGGTGACTC
AAAAAACAAAGGAAGTGGCAGGGAAGGTATCTGAAACAGCACAAGATTTGGCTGGGAAGGCAAAGCAAACAGTTCAAGATGCATGGGGTTCAGTGAAGGATACAACTCAA
AATATCAAAGAGAAAGTTGTTGGCAAAGCTGAAGAATCCAAAGAAGCCATTAAAGACACTGCAGAGAATCTCAAACAGAACAAGAAACATGCTGAAGAGAAGTTCTCGAC
GACATCAACAACAAGGTATTTGCGGCAGCAGCAGCAACGTCTCGATGGCTGCAACGACAACGCCTTGATCTAG
mRNA sequenceShow/hide mRNA sequence
CTGAGATCTGATTAGAACTTTAAAAAAGAGAAAAGAAAAAAGGAAAATTAGATAGAAGAATGGCAAGCTTCTTGGCCTCGTCGGCAACTCTTCCAAAGCTTCATCGTGCT
GGATCTATTCTTGTACACAGCCCATGGAGTTCTAAAGTTTTTGTCTCTGTCCGACCAAGAAATGCAAGTTCACAGGTTGCTGCAGCAGCCGATGGAGCTGCTCAAGCTGT
AAAGCGAGCCACTGAGAAGGCTGCTGAAGAAGTCAAAGATAAGGCTGAGGAGGTGACTCAAAAAACAAAGGAAGTGGCAGGGAAGGTATCTGAAACAGCACAAGATTTGG
CTGGGAAGGCAAAGCAAACAGTTCAAGATGCATGGGGTTCAGTGAAGGATACAACTCAAAATATCAAAGAGAAAGTTGTTGGCAAAGCTGAAGAATCCAAAGAAGCCATT
AAAGACACTGCAGAGAATCTCAAACAGAACAAGAAACATGCTGAAGAGAAGTTCTCGACGACATCAACAACAAGGTATTTGCGGCAGCAGCAGCAACGTCTCGATGGCTG
CAACGACAACGCCTTGATCTAGGGCTGGAAGCTTGAAGATCATCAAAATTCATGTCGCTTGAAGATCGAAGTCGGCGTGCTGGAAGCTTGAAGATCAACGTGCAAGGAGA
TTTGTTTGTTCAAACTTTTCGATTTAGTAATGAAAGAGGAAGAAATTAAATTGTGTGAAAACCGAAAGAGAAAGAGAAAAACGTGAAACAATACCGTTTTGAATCAGATT
TTAAAAGCTTTACTGACGCGCAAAAATCGTCAATAATAAAGACTTTGTTGATGGACAACAAAAA
Protein sequenceShow/hide protein sequence
MASFLASSATLPKLHRAGSILVHSPWSSKVFVSVRPRNASSQVAAAADGAAQAVKRATEKAAEEVKDKAEEVTQKTKEVAGKVSETAQDLAGKAKQTVQDAWGSVKDTTQ
NIKEKVVGKAEESKEAIKDTAENLKQNKKHAEEKFSTTSTTRYLRQQQQRLDGCNDNALI