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Lsi02G020770 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G020770
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 41-like
Genome locationchr02:26957173..26957508
RNA-Seq ExpressionLsi02G020770
SyntenyLsi02G020770
Gene Ontology termsGO:0010089 - xylem development (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0033612 - receptor serine/threonine kinase binding (molecular function)
InterPro domainsIPR037495 - CLAVATA3/ESR (CLE)-related protein 41/42/44


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646241.1 hypothetical protein Csa_015939 [Cucumis sativus]6.1e-3377.19Show/hide
Query:  MDIEPLWGVGGWFLVLNCMAATTPKQSSSSHFLPPKSSILFLSLFFSFLLLLTLISSPPPPSMAPDR-HRLLSASSTVFHPTKSRPR-TSPAT-AAEFGA
        MDIEPLWGVGGWF  LNCMA  + KQSSS  F      +LFLSLFFSFLLLLTLISS  PPSMA DR HRLLSASST FHP KSRPR TSPAT   +FGA
Subjt:  MDIEPLWGVGGWFLVLNCMAATTPKQSSSSHFLPPKSSILFLSLFFSFLLLLTLISSPPPPSMAPDR-HRLLSASSTVFHPTKSRPR-TSPAT-AAEFGA

Query:  EAHEVPSGPNPISN
        EAHEVPSGPNPISN
Subjt:  EAHEVPSGPNPISN

KAG6657667.1 hypothetical protein CIPAW_04G106100 [Carya illinoinensis]5.2e-1652.34Show/hide
Query:  MDIEPLWGVGGWFLVLNCMAATTPKQSSSS-HFLPPKSS--ILFLSLFFSFLLLLTLISSPPPPSM---APDRHRLL------SASSTVFHP--TKSRPR
        MD EPLW VGGW +  NCMA   PK SS S   +  KS   +LFL + F FLLL+ LIS+P  PSM   AP +  LL      +AS+   +P  T++RP 
Subjt:  MDIEPLWGVGGWFLVLNCMAATTPKQSSSS-HFLPPKSS--ILFLSLFFSFLLLLTLISSPPPPSM---APDRHRLL------SASSTVFHP--TKSRPR

Query:  T---SPATAAEFGAEAHEVPSGPNPISN
        T   S +T  EFGAEAHEVPSGPNPISN
Subjt:  T---SPATAAEFGAEAHEVPSGPNPISN

RDX66753.1 CLAVATA3/ESR (CLE)-related protein TDIF, partial [Mucuna pruriens]1.5e-1550Show/hide
Query:  MDIEPLWGVGGWFLVLNCMAATTPKQSSSSHFLPPKSS----ILFLSLFFSFLLLLTLISSPPPPSMAPDRHRLLS---ASSTVFHPTKSRPRTSPATAA
        MDIEPLW +GGW  + NCMA   PK SSSS    P S     + FL+LFF  LLL+ L   P P +MA   +   S    S+T  HP  S   +S   A 
Subjt:  MDIEPLWGVGGWFLVLNCMAATTPKQSSSSHFLPPKSS----ILFLSLFFSFLLLLTLISSPPPPSMAPDRHRLLS---ASSTVFHPTKSRPRTSPATAA

Query:  EFGAEAHEVPSGPNPISN
        E GA+AHEVPSGPNPISN
Subjt:  EFGAEAHEVPSGPNPISN

XP_007201234.1 CLAVATA3/ESR (CLE)-related protein 41 [Prunus persica]6.1e-1751.49Show/hide
Query:  MDIEPLWGVGGWFLVLNCMAA---TTPKQSSSS----HFLPPKSSILFLSL-FFSFLLLLTLISSP---PPPSMAPDRHRLL------SASSTVFHPTKS
        MDIEPLW +GGWFL+ NCMAA   T+P  SS S    H       +LFLSL FF FLLL++ IS+P    P SMA    RLL      + S+T  HP K+
Subjt:  MDIEPLWGVGGWFLVLNCMAA---TTPKQSSSS----HFLPPKSSILFLSL-FFSFLLLLTLISSP---PPPSMAPDRHRLL------SASSTVFHPTKS

Query:  RPRTSPATAA------EFGAEAHEVPSGPNPISN
        +   + AT++      EFGAEAHEVPSGPNPISN
Subjt:  RPRTSPATAA------EFGAEAHEVPSGPNPISN

XP_017417475.1 PREDICTED: CLAVATA3/ESR (CLE)-related protein TDIF-like [Vigna angularis]1.2e-1547.5Show/hide
Query:  MDIEPLWGVGGWFLVLNCMAATTPKQSSSSHFLPPKSSILFLSLFFSFLLLLTLISSPPPPSMAPDRHRLLSA----SSTVFHPTKSRPRTSPATAA---
        MDIEPLW +GGWF + NCMA        S       S + FL+LFF  LLL+ L   P P +MA       S+    S+T  HP  S+   SP++ A   
Subjt:  MDIEPLWGVGGWFLVLNCMAATTPKQSSSSHFLPPKSSILFLSLFFSFLLLLTLISSPPPPSMAPDRHRLLSA----SSTVFHPTKSRPRTSPATAA---

Query:  --EFGAEAHEVPSGPNPISN
          EFGAEAHEVPSGPNPISN
Subjt:  --EFGAEAHEVPSGPNPISN

TrEMBL top hitse value%identityAlignment
A0A0S3RV03 Uncharacterized protein5.6e-1647.5Show/hide
Query:  MDIEPLWGVGGWFLVLNCMAATTPKQSSSSHFLPPKSSILFLSLFFSFLLLLTLISSPPPPSMAPDRHRLLSA----SSTVFHPTKSRPRTSPATAA---
        MDIEPLW +GGWF + NCMA        S       S + FL+LFF  LLL+ L   P P +MA       S+    S+T  HP  S+   SP++ A   
Subjt:  MDIEPLWGVGGWFLVLNCMAATTPKQSSSSHFLPPKSSILFLSLFFSFLLLLTLISSPPPPSMAPDRHRLLSA----SSTVFHPTKSRPRTSPATAA---

Query:  --EFGAEAHEVPSGPNPISN
          EFGAEAHEVPSGPNPISN
Subjt:  --EFGAEAHEVPSGPNPISN

A0A2P6PUF9 Uncharacterized protein9.6e-1650Show/hide
Query:  MDIEPLWGVGGWFLVLNCMAATTPKQSSSSHFLPPKSSILFLSLFFSFLLLLTLISSPPPPSMAPDRHRLLSASSTVFHPTKSRPR-----------TSP
        MDIEPLW +GGWFL+ NCM A+ PK  S SH    K   L LSL   F+LLL +     P SMA    RLL A +T    T  +P+           TS 
Subjt:  MDIEPLWGVGGWFLVLNCMAATTPKQSSSSHFLPPKSSILFLSLFFSFLLLLTLISSPPPPSMAPDRHRLLSASSTVFHPTKSRPR-----------TSP

Query:  ATAAEFGAEAHEVPSGPNPISN
           +EFGAEAHEVPSGPNPISN
Subjt:  ATAAEFGAEAHEVPSGPNPISN

A0A371EL24 CLAVATA3/ESR (CLE)-related protein TDIF (Fragment)7.3e-1650Show/hide
Query:  MDIEPLWGVGGWFLVLNCMAATTPKQSSSSHFLPPKSS----ILFLSLFFSFLLLLTLISSPPPPSMAPDRHRLLS---ASSTVFHPTKSRPRTSPATAA
        MDIEPLW +GGW  + NCMA   PK SSSS    P S     + FL+LFF  LLL+ L   P P +MA   +   S    S+T  HP  S   +S   A 
Subjt:  MDIEPLWGVGGWFLVLNCMAATTPKQSSSSHFLPPKSS----ILFLSLFFSFLLLLTLISSPPPPSMAPDRHRLLS---ASSTVFHPTKSRPRTSPATAA

Query:  EFGAEAHEVPSGPNPISN
        E GA+AHEVPSGPNPISN
Subjt:  EFGAEAHEVPSGPNPISN

A0A5D2PJA6 Uncharacterized protein1.2e-1550.79Show/hide
Query:  MDIEPLWGVGGWFLV-LNCMAAT--TPKQSSSS----HFLPPKSSILFLSLFFSFLLLLT------LISSPPPPSMAPDRHRLLSASSTV-FHPTKSRP-
        MDIEPLW +GGWF + ++CMAAT  TP  SSSS     F    S +  L+LFF FLLLL        + SP      P +  LL ASS +  HP ++R  
Subjt:  MDIEPLWGVGGWFLV-LNCMAAT--TPKQSSSS----HFLPPKSSILFLSLFFSFLLLLT------LISSPPPPSMAPDRHRLLSASSTV-FHPTKSRP-

Query:  RTSPATAAEFGAEAHEVPSGPNPISN
         TS ++  EFGAEAHEVPSGPNPISN
Subjt:  RTSPATAAEFGAEAHEVPSGPNPISN

M5VZL5 Uncharacterized protein3.0e-1751.49Show/hide
Query:  MDIEPLWGVGGWFLVLNCMAA---TTPKQSSSS----HFLPPKSSILFLSL-FFSFLLLLTLISSP---PPPSMAPDRHRLL------SASSTVFHPTKS
        MDIEPLW +GGWFL+ NCMAA   T+P  SS S    H       +LFLSL FF FLLL++ IS+P    P SMA    RLL      + S+T  HP K+
Subjt:  MDIEPLWGVGGWFLVLNCMAA---TTPKQSSSS----HFLPPKSSILFLSL-FFSFLLLLTLISSP---PPPSMAPDRHRLL------SASSTVFHPTKS

Query:  RPRTSPATAA------EFGAEAHEVPSGPNPISN
        +   + AT++      EFGAEAHEVPSGPNPISN
Subjt:  RPRTSPATAA------EFGAEAHEVPSGPNPISN

SwissProt top hitse value%identityAlignment
A1EC31 CLAVATA3/ESR (CLE)-related protein TDIF2.0e-1037.31Show/hide
Query:  MDIEPLWGVGGWFLVL-----NCMAATTPKQSSSSHFLPPKSSILFLSLFFSFLLLLTLI-------------SSPPPPSMAPDRHRLLSASSTV-----
        MDI+ LW  GGWF +L     N   A     S  SHF  P+S     SLFF  LL++T++             S P     + + H   S SST      
Subjt:  MDIEPLWGVGGWFLVL-----NCMAATTPKQSSSSHFLPPKSSILFLSLFFSFLLLLTLI-------------SSPPPPSMAPDRHRLLSASSTV-----

Query:  FHPTKSRPRTSPATAAEFGAEAHEVPSGPNPISN
         HP ++  ++ P     F A AHEVPSGPNPISN
Subjt:  FHPTKSRPRTSPATAAEFGAEAHEVPSGPNPISN

Arabidopsis top hitse value%identityAlignment
AT3G24770.1 CLAVATA3/ESR-RELATED 413.7e-0438.89Show/hide
Query:  SSSSHFLPPKSSILFLSLFFSFLLLLTLISSPPPPSMAPDRHRLLS----ASSTV-FHPTKSRPRTSPATAAEFGAEAHEVPSGPNPISN
        + SSH        +FLSL     L + +        +AP +  LL     ASST+   P  S  R+  +   EFG +AHEVPSGPNPISN
Subjt:  SSSSHFLPPKSSILFLSLFFSFLLLLTLISSPPPPSMAPDRHRLLS----ASSTV-FHPTKSRPRTSPATAAEFGAEAHEVPSGPNPISN

AT4G13195.1 CLAVATA3/ESR-RELATED 442.2e-0433.93Show/hide
Query:  MAATTPKQSSSSHFLPPKSSILFLSLFFSFLLLL--------TLISSPPPPSMAPDRHRLLSASSTVFHPTKSRPRTSPATAA-----------EFGAEA
        MA T  + S  S        ++   +F +FL L+         L  S    +MAP +  LL  S+      K RP   P  +            EF AEA
Subjt:  MAATTPKQSSSSHFLPPKSSILFLSLFFSFLLLL--------TLISSPPPPSMAPDRHRLLSASSTVFHPTKSRPRTSPATAA-----------EFGAEA

Query:  HEVPSGPNPISN
        HEVPSGPNPISN
Subjt:  HEVPSGPNPISN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATTGAACCCTTGTGGGGTGTTGGGGGGTGGTTTCTTGTCTTAAATTGCATGGCAGCTACTACACCAAAACAATCTTCATCATCTCATTTTCTCCCACCAAAATC
TTCCATTCTCTTTCTCTCTCTTTTCTTCTCCTTCCTCCTCCTTCTTACCCTCATTTCCTCTCCTCCTCCTCCTTCCATGGCCCCCGACCGCCACCGCCTTCTCTCCGCCT
CCTCCACCGTCTTCCATCCAACAAAATCTCGACCTCGAACCTCTCCTGCAACCGCCGCAGAGTTCGGAGCTGAAGCCCATGAAGTTCCCAGTGGTCCAAACCCTATATCC
AACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATATTGAACCCTTGTGGGGTGTTGGGGGGTGGTTTCTTGTCTTAAATTGCATGGCAGCTACTACACCAAAACAATCTTCATCATCTCATTTTCTCCCACCAAAATC
TTCCATTCTCTTTCTCTCTCTTTTCTTCTCCTTCCTCCTCCTTCTTACCCTCATTTCCTCTCCTCCTCCTCCTTCCATGGCCCCCGACCGCCACCGCCTTCTCTCCGCCT
CCTCCACCGTCTTCCATCCAACAAAATCTCGACCTCGAACCTCTCCTGCAACCGCCGCAGAGTTCGGAGCTGAAGCCCATGAAGTTCCCAGTGGTCCAAACCCTATATCC
AACTAA
Protein sequenceShow/hide protein sequence
MDIEPLWGVGGWFLVLNCMAATTPKQSSSSHFLPPKSSILFLSLFFSFLLLLTLISSPPPPSMAPDRHRLLSASSTVFHPTKSRPRTSPATAAEFGAEAHEVPSGPNPIS
N