; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G020970 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G020970
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGPI transamidase component Gpi16 subunit family protein isoform 1
Genome locationchr02:27164334..27165990
RNA-Seq ExpressionLsi02G020970
SyntenyLsi02G020970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026205.1 uncharacterized protein E6C27_scaffold19G001750 [Cucumis melo var. makuwa]7.6e-10284.98Show/hide
Query:  MEKTAQKLRTIHLFCPSLSTVAPFLASDDHRIDIGSIAAIFGLEPSSLKLNGHFLSRGFDLVSSVTWNSLLSFFSAKRLPIGSSDHDALVVDGKLSKIGV
        MEKT QKL TIHLFCPSLST APFLAS DH IDIGSIAAIFGL+PSSLKLNG FLSRG DL+SSVTWNSLLSFFS KRLPIGSS +DAL+VDGKLSKIG 
Subjt:  MEKTAQKLRTIHLFCPSLSTVAPFLASDDHRIDIGSIAAIFGLEPSSLKLNGHFLSRGFDLVSSVTWNSLLSFFSAKRLPIGSSDHDALVVDGKLSKIGV

Query:  KRAHGPQELVSGDCCKADEEDDNVNVRRIKPESNLVKNKKMKYMDLGSKHVDSSASKFSPNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGGVSDAAN
        KR HG QE VSGD  +ADEE D+VN  RIKPESNLVKNKKMK+MD G+KH+DS +SKFSPNG KRKQ  EEVILLKKLKLNETKSGFDELSDGGVSD AN
Subjt:  KRAHGPQELVSGDCCKADEEDDNVNVRRIKPESNLVKNKKMKYMDLGSKHVDSSASKFSPNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGGVSDAAN

Query:  VAQRTAYSCSFNSNMKRMREEETLVSALCKRSR
        VAQRTAYSCS NSNMKRMREEETLVSALCKRSR
Subjt:  VAQRTAYSCSFNSNMKRMREEETLVSALCKRSR

KAG6593003.1 hypothetical protein SDJN03_12479, partial [Cucurbita argyrosperma subsp. sororia]1.1e-8976.62Show/hide
Query:  QKLRTIHLFCPSLSTVAPFLASDDHRIDIGSIAAIFGLEPSSLKLNGHFLSRGFDLVSSVTWNSLLSFFSAKRLPIGSSDHDALVVDGKLSKIGVKRAHG
        Q+LRTI LFCPSLST+APF+AS D  IDIGSIA IFGLEPS++KLNGHFLSRG DLVSSVTWNSLLSFFSAKRLP G SD DALVVDGKLSKIGVKRAH 
Subjt:  QKLRTIHLFCPSLSTVAPFLASDDHRIDIGSIAAIFGLEPSSLKLNGHFLSRGFDLVSSVTWNSLLSFFSAKRLPIGSSDHDALVVDGKLSKIGVKRAHG

Query:  PQELVSGDCCKADEEDDNVNVRRIKPESNLVKNKKMKYMDLGSKHVDSSASKFSPNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGG--VSDAANVAQ
        PQE+ +GDCC+ADEED N+N  R+KPESNLVKNK++KYM+ GSK +DS   K SPN YKRKQ+MEEVILLKKLKLNETKSGFDELSD G  ++  AN   
Subjt:  PQELVSGDCCKADEEDDNVNVRRIKPESNLVKNKKMKYMDLGSKHVDSSASKFSPNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGG--VSDAANVAQ

Query:  RTAYSCSFNS-NMKRMREEETLVSALCKRSR
        RTAYSCS+NS NMKRMRE+E LV A CKR++
Subjt:  RTAYSCSFNS-NMKRMREEETLVSALCKRSR

XP_004139632.1 uncharacterized protein LOC101203142 [Cucumis sativus]2.3e-9881.97Show/hide
Query:  MEKTAQKLRTIHLFCPSLSTVAPFLASDDHRIDIGSIAAIFGLEPSSLKLNGHFLSRGFDLVSSVTWNSLLSFFSAKRLPIGSSDHDALVVDGKLSKIGV
        MEKT QKL TIHLFCPSLST APFLAS D+ IDIGSIAAIFGL+PSSLKLNGHFLSRG DL+SSVTWNSLLSFFS KRLPIGSS H+AL+VDGKLSKIG 
Subjt:  MEKTAQKLRTIHLFCPSLSTVAPFLASDDHRIDIGSIAAIFGLEPSSLKLNGHFLSRGFDLVSSVTWNSLLSFFSAKRLPIGSSDHDALVVDGKLSKIGV

Query:  KRAHGPQELVSGDCCKADEEDDNVNVRRIKPESNLVKNKKMKYMDLGSKHVDSSASKFSPNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGGVSDAAN
        KR HG +E VSGD  +ADEE  +VNV RIKPE NLVK+KKMK+MDLG+KH+DS +SKFSPN  KRKQ MEEVILLKKLKLNETKSGFD LSDGGVSD  N
Subjt:  KRAHGPQELVSGDCCKADEEDDNVNVRRIKPESNLVKNKKMKYMDLGSKHVDSSASKFSPNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGGVSDAAN

Query:  VAQRTAYSCSFNSNMKRMREEETLVSALCKRSR
        V QR  YSCSFNSNMKRMREEETLVS LCKRSR
Subjt:  VAQRTAYSCSFNSNMKRMREEETLVSALCKRSR

XP_008458021.1 PREDICTED: uncharacterized protein LOC103497564 [Cucumis melo]7.6e-10284.98Show/hide
Query:  MEKTAQKLRTIHLFCPSLSTVAPFLASDDHRIDIGSIAAIFGLEPSSLKLNGHFLSRGFDLVSSVTWNSLLSFFSAKRLPIGSSDHDALVVDGKLSKIGV
        MEKT QKL TIHLFCPSLST APFLAS DH IDIGSIAAIFGL+PSSLKLNG FLSRG DL+SSVTWNSLLSFFS KRLPIGSS +DAL+VDGKLSKIG 
Subjt:  MEKTAQKLRTIHLFCPSLSTVAPFLASDDHRIDIGSIAAIFGLEPSSLKLNGHFLSRGFDLVSSVTWNSLLSFFSAKRLPIGSSDHDALVVDGKLSKIGV

Query:  KRAHGPQELVSGDCCKADEEDDNVNVRRIKPESNLVKNKKMKYMDLGSKHVDSSASKFSPNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGGVSDAAN
        KR HG QE VSGD  +ADEE D+VN  RIKPESNLVKNKKMK+MD G+KH+DS +SKFSPNG KRKQ  EEVILLKKLKLNETKSGFDELSDGGVSD AN
Subjt:  KRAHGPQELVSGDCCKADEEDDNVNVRRIKPESNLVKNKKMKYMDLGSKHVDSSASKFSPNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGGVSDAAN

Query:  VAQRTAYSCSFNSNMKRMREEETLVSALCKRSR
        VAQRTAYSCS NSNMKRMREEETLVSALCKRSR
Subjt:  VAQRTAYSCSFNSNMKRMREEETLVSALCKRSR

XP_038897802.1 uncharacterized protein LOC120085717 isoform X1 [Benincasa hispida]5.1e-11492.27Show/hide
Query:  MEKTAQKLRTIHLFCPSLSTVAPFLASDDHRIDIGSIAAIFGLEPSSLKLNGHFLSRGFDLVSSVTWNSLLSFFSAKRLPIGSSDHDALVVDGKLSKIGV
        MEKTAQKLRTIHLFCPSLST+APFLASDDH +DIGSIAAIFGL+PSSLKLNGHFLSRG DLVS VTWNSLLSFFS KRLPIGSSD+DAL+VDGKLSK+GV
Subjt:  MEKTAQKLRTIHLFCPSLSTVAPFLASDDHRIDIGSIAAIFGLEPSSLKLNGHFLSRGFDLVSSVTWNSLLSFFSAKRLPIGSSDHDALVVDGKLSKIGV

Query:  KRAHGPQELVSGDCCKADEEDDNVNVRRIKPESNLVKNKKMKYMDLGSKHVDSSASKFSPNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGGVSDAAN
        KRAHG QE+VSGDCCKADEEDDNVNV RIKPESNLVKNKKMKYMDLGSKH+DS ASKF+PNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGGVSDAAN
Subjt:  KRAHGPQELVSGDCCKADEEDDNVNVRRIKPESNLVKNKKMKYMDLGSKHVDSSASKFSPNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGGVSDAAN

Query:  VAQRTAYSCSFNSNMKRMREEETLVSALCKRSR
        VAQ  AYSCSFNSNMKRMREEETLVSALCKRSR
Subjt:  VAQRTAYSCSFNSNMKRMREEETLVSALCKRSR

TrEMBL top hitse value%identityAlignment
A0A0A0K4J5 Uncharacterized protein1.1e-9881.97Show/hide
Query:  MEKTAQKLRTIHLFCPSLSTVAPFLASDDHRIDIGSIAAIFGLEPSSLKLNGHFLSRGFDLVSSVTWNSLLSFFSAKRLPIGSSDHDALVVDGKLSKIGV
        MEKT QKL TIHLFCPSLST APFLAS D+ IDIGSIAAIFGL+PSSLKLNGHFLSRG DL+SSVTWNSLLSFFS KRLPIGSS H+AL+VDGKLSKIG 
Subjt:  MEKTAQKLRTIHLFCPSLSTVAPFLASDDHRIDIGSIAAIFGLEPSSLKLNGHFLSRGFDLVSSVTWNSLLSFFSAKRLPIGSSDHDALVVDGKLSKIGV

Query:  KRAHGPQELVSGDCCKADEEDDNVNVRRIKPESNLVKNKKMKYMDLGSKHVDSSASKFSPNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGGVSDAAN
        KR HG +E VSGD  +ADEE  +VNV RIKPE NLVK+KKMK+MDLG+KH+DS +SKFSPN  KRKQ MEEVILLKKLKLNETKSGFD LSDGGVSD  N
Subjt:  KRAHGPQELVSGDCCKADEEDDNVNVRRIKPESNLVKNKKMKYMDLGSKHVDSSASKFSPNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGGVSDAAN

Query:  VAQRTAYSCSFNSNMKRMREEETLVSALCKRSR
        V QR  YSCSFNSNMKRMREEETLVS LCKRSR
Subjt:  VAQRTAYSCSFNSNMKRMREEETLVSALCKRSR

A0A1S3C6U5 uncharacterized protein LOC1034975643.7e-10284.98Show/hide
Query:  MEKTAQKLRTIHLFCPSLSTVAPFLASDDHRIDIGSIAAIFGLEPSSLKLNGHFLSRGFDLVSSVTWNSLLSFFSAKRLPIGSSDHDALVVDGKLSKIGV
        MEKT QKL TIHLFCPSLST APFLAS DH IDIGSIAAIFGL+PSSLKLNG FLSRG DL+SSVTWNSLLSFFS KRLPIGSS +DAL+VDGKLSKIG 
Subjt:  MEKTAQKLRTIHLFCPSLSTVAPFLASDDHRIDIGSIAAIFGLEPSSLKLNGHFLSRGFDLVSSVTWNSLLSFFSAKRLPIGSSDHDALVVDGKLSKIGV

Query:  KRAHGPQELVSGDCCKADEEDDNVNVRRIKPESNLVKNKKMKYMDLGSKHVDSSASKFSPNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGGVSDAAN
        KR HG QE VSGD  +ADEE D+VN  RIKPESNLVKNKKMK+MD G+KH+DS +SKFSPNG KRKQ  EEVILLKKLKLNETKSGFDELSDGGVSD AN
Subjt:  KRAHGPQELVSGDCCKADEEDDNVNVRRIKPESNLVKNKKMKYMDLGSKHVDSSASKFSPNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGGVSDAAN

Query:  VAQRTAYSCSFNSNMKRMREEETLVSALCKRSR
        VAQRTAYSCS NSNMKRMREEETLVSALCKRSR
Subjt:  VAQRTAYSCSFNSNMKRMREEETLVSALCKRSR

A0A5D3E3Q7 Uncharacterized protein3.7e-10284.98Show/hide
Query:  MEKTAQKLRTIHLFCPSLSTVAPFLASDDHRIDIGSIAAIFGLEPSSLKLNGHFLSRGFDLVSSVTWNSLLSFFSAKRLPIGSSDHDALVVDGKLSKIGV
        MEKT QKL TIHLFCPSLST APFLAS DH IDIGSIAAIFGL+PSSLKLNG FLSRG DL+SSVTWNSLLSFFS KRLPIGSS +DAL+VDGKLSKIG 
Subjt:  MEKTAQKLRTIHLFCPSLSTVAPFLASDDHRIDIGSIAAIFGLEPSSLKLNGHFLSRGFDLVSSVTWNSLLSFFSAKRLPIGSSDHDALVVDGKLSKIGV

Query:  KRAHGPQELVSGDCCKADEEDDNVNVRRIKPESNLVKNKKMKYMDLGSKHVDSSASKFSPNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGGVSDAAN
        KR HG QE VSGD  +ADEE D+VN  RIKPESNLVKNKKMK+MD G+KH+DS +SKFSPNG KRKQ  EEVILLKKLKLNETKSGFDELSDGGVSD AN
Subjt:  KRAHGPQELVSGDCCKADEEDDNVNVRRIKPESNLVKNKKMKYMDLGSKHVDSSASKFSPNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGGVSDAAN

Query:  VAQRTAYSCSFNSNMKRMREEETLVSALCKRSR
        VAQRTAYSCS NSNMKRMREEETLVSALCKRSR
Subjt:  VAQRTAYSCSFNSNMKRMREEETLVSALCKRSR

A0A6J1H8F0 uncharacterized protein LOC111460597 isoform X11.6e-8976.19Show/hide
Query:  QKLRTIHLFCPSLSTVAPFLASDDHRIDIGSIAAIFGLEPSSLKLNGHFLSRGFDLVSSVTWNSLLSFFSAKRLPIGSSDHDALVVDGKLSKIGVKRAHG
        Q+LRTI LFCPSLST+APF+AS D  IDIGSIA IFGLEPS++KLNGHFLSRG DLVSSVTWNSLLSFFSAKRLP G SD DALVVDGKLSKIGVKRAH 
Subjt:  QKLRTIHLFCPSLSTVAPFLASDDHRIDIGSIAAIFGLEPSSLKLNGHFLSRGFDLVSSVTWNSLLSFFSAKRLPIGSSDHDALVVDGKLSKIGVKRAHG

Query:  PQELVSGDCCKADEEDDNVNVRRIKPESNLVKNKKMKYMDLGSKHVDSSASKFSPNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGG--VSDAANVAQ
        PQE+ +GDCC+ADEED N+N  R+KPESNLVKNK++K+M+ GSK +DS   K SPN YKRKQ+MEEVILLKKLKLNETKSGFDELSD G  ++  AN   
Subjt:  PQELVSGDCCKADEEDDNVNVRRIKPESNLVKNKKMKYMDLGSKHVDSSASKFSPNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGG--VSDAANVAQ

Query:  RTAYSCSFNS-NMKRMREEETLVSALCKRSR
        RTAYSCS+NS NMKRMRE+E LV A CKR++
Subjt:  RTAYSCSFNS-NMKRMREEETLVSALCKRSR

A0A6J1KVM1 uncharacterized protein LOC111498000 isoform X11.4e-8874.89Show/hide
Query:  QKLRTIHLFCPSLSTVAPFLASDDHRIDIGSIAAIFGLEPSSLKLNGHFLSRGFDLVSSVTWNSLLSFFSAKRLPIGSSDHDALVVDGKLSKIGVKRAHG
        Q+LRTI LFC SLST+APF+AS+D  IDIGSIA IFGLEPS++KLNGHFLSRG DLVSSVTWNSLLSFFSAKRLP G SD DALVVDGKLSKIGVKRAH 
Subjt:  QKLRTIHLFCPSLSTVAPFLASDDHRIDIGSIAAIFGLEPSSLKLNGHFLSRGFDLVSSVTWNSLLSFFSAKRLPIGSSDHDALVVDGKLSKIGVKRAHG

Query:  PQELVSGDCCKADEEDDNVNVRRIKPESNLVKNKKMKYMDLGSKHVDSSASKFSPNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGG--VSDAANVAQ
        PQE+ +GDCC+ADEED N+N  R+KPESNLVKNK++K+M+ GSK +DS  SK SPN Y+RKQ+MEEV+LLKKLKLNETKSGFDELSD G  +++ AN   
Subjt:  PQELVSGDCCKADEEDDNVNVRRIKPESNLVKNKKMKYMDLGSKHVDSSASKFSPNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGG--VSDAANVAQ

Query:  RTAYSCSFNS-NMKRMREEETLVSALCKRSR
        RTA SCS+NS NMKRMRE+E LV A CKR++
Subjt:  RTAYSCSFNS-NMKRMREEETLVSALCKRSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G07150.1 unknown protein5.7e-3141.67Show/hide
Query:  RTIHLFCPSLSTVAPFLASDDHRIDIGSIAAIFGLEPSSLKLNGHFLSRGFDLVSS-VTWNSLLSFFSAKRLPIGSSDHDALVVDGKLSKIGVKRAHGPQ
        R I LFCPS+S +  ++A +D ++D  +IAA FGLEPS++KLNGHF+SRGFDLV++ VTW SLL+FFSA+ L  G  + DAL+V GKLSK+G KRA    
Subjt:  RTIHLFCPSLSTVAPFLASDDHRIDIGSIAAIFGLEPSSLKLNGHFLSRGFDLVSS-VTWNSLLSFFSAKRLPIGSSDHDALVVDGKLSKIGVKRAHGPQ

Query:  ELVSGDCCKADEEDDNVNVRRIKPESNLVKNKKMKYMDLGSKHVDSSASKFSPNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGGVSDAANVAQRTAY
                    ED   N      +  L+K KK+K      + + S  +       KRK   E+   LKKLKLN      D+   G  S       +T  
Subjt:  ELVSGDCCKADEEDDNVNVRRIKPESNLVKNKKMKYMDLGSKHVDSSASKFSPNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGGVSDAANVAQRTAY

Query:  SCSFNSN--MKRMREEETLVSALCKRSR
         CSF S+  +KR RE++ + SA CK+ R
Subjt:  SCSFNSN--MKRMREEETLVSALCKRSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGACAGCCCAAAAACTCAGAACCATCCATTTATTTTGCCCTTCACTCTCCACCGTTGCCCCGTTCCTCGCTTCCGACGACCATCGCATCGATATCGGCTCCAT
AGCCGCCATTTTCGGCCTCGAACCCTCATCGCTGAAGCTCAATGGCCACTTCCTCAGCCGCGGCTTCGATCTCGTCTCCTCTGTAACTTGGAACTCGCTTCTCTCTTTCT
TCTCTGCTAAACGCCTCCCAATCGGGAGCTCCGACCACGATGCTCTTGTTGTTGATGGAAAGCTCTCTAAAATTGGCGTCAAGAGAGCTCATGGCCCTCAGGAACTTGTA
AGTGGAGATTGTTGCAAAGCTGATGAAGAAGATGACAATGTTAATGTTAGAAGGATAAAACCAGAAAGCAACTTGGTCAAGAACAAAAAGATGAAGTATATGGACTTAGG
AAGCAAACATGTGGATTCTTCAGCATCCAAATTTAGTCCCAATGGTTACAAAAGAAAACAAAACATGGAAGAAGTCATCTTACTCAAGAAATTAAAGTTAAACGAAACCA
AATCAGGTTTCGACGAATTATCAGACGGAGGAGTAAGCGATGCAGCCAATGTTGCCCAACGGACAGCATATTCGTGTAGCTTCAATAGTAATATGAAAAGGATGAGAGAA
GAAGAAACACTTGTTTCTGCTTTATGCAAGAGAAGTAGATGA
mRNA sequenceShow/hide mRNA sequence
CTGTCTCCACGGAGGCCCGAGAGTCCGAGACACTTCCAGAGACTATTCGGAGGCAAAATCTGCAACACAGTCCGTCGCCATCGCTATACAAAACAAATGAAAATGTTCAT
TTGGAGCTTCAGATTGCGATGGAGAAGACAGCCCAAAAACTCAGAACCATCCATTTATTTTGCCCTTCACTCTCCACCGTTGCCCCGTTCCTCGCTTCCGACGACCATCG
CATCGATATCGGCTCCATAGCCGCCATTTTCGGCCTCGAACCCTCATCGCTGAAGCTCAATGGCCACTTCCTCAGCCGCGGCTTCGATCTCGTCTCCTCTGTAACTTGGA
ACTCGCTTCTCTCTTTCTTCTCTGCTAAACGCCTCCCAATCGGGAGCTCCGACCACGATGCTCTTGTTGTTGATGGAAAGCTCTCTAAAATTGGCGTCAAGAGAGCTCAT
GGCCCTCAGGAACTTGTAAGTGGAGATTGTTGCAAAGCTGATGAAGAAGATGACAATGTTAATGTTAGAAGGATAAAACCAGAAAGCAACTTGGTCAAGAACAAAAAGAT
GAAGTATATGGACTTAGGAAGCAAACATGTGGATTCTTCAGCATCCAAATTTAGTCCCAATGGTTACAAAAGAAAACAAAACATGGAAGAAGTCATCTTACTCAAGAAAT
TAAAGTTAAACGAAACCAAATCAGGTTTCGACGAATTATCAGACGGAGGAGTAAGCGATGCAGCCAATGTTGCCCAACGGACAGCATATTCGTGTAGCTTCAATAGTAAT
ATGAAAAGGATGAGAGAAGAAGAAACACTTGTTTCTGCTTTATGCAAGAGAAGTAGATGAACACATGGTTTCCCCAAGCCAGTGTACCCTGTTTCTTAACTTTTTCTTCT
TTTGATTGTTGAGGTTTGTAAATATGAAGAACATGGTTACTGTGTTCTATGGTGTATAGAATTTTGTTCACCATCTTAGGCCACATTTACTGAACCATAATAAAAATTGA
TGTAATTGTAGTAGAATTTTATTGATTGATAAATTGTAATGATGTATTTGATTGCTTTTGACCGCA
Protein sequenceShow/hide protein sequence
MEKTAQKLRTIHLFCPSLSTVAPFLASDDHRIDIGSIAAIFGLEPSSLKLNGHFLSRGFDLVSSVTWNSLLSFFSAKRLPIGSSDHDALVVDGKLSKIGVKRAHGPQELV
SGDCCKADEEDDNVNVRRIKPESNLVKNKKMKYMDLGSKHVDSSASKFSPNGYKRKQNMEEVILLKKLKLNETKSGFDELSDGGVSDAANVAQRTAYSCSFNSNMKRMRE
EETLVSALCKRSR