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Lsi02G021090 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G021090
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCalmodulin, putative
Genome locationchr02:27286347..27301210
RNA-Seq ExpressionLsi02G021090
SyntenyLsi02G021090
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3456922.1 hypothetical protein FNV43_RR01576 [Rhamnella rubrinervis]2.4e-0859.38Show/hide
Query:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
        RSLDQNPTEEELQDMI EVDADGNGTIEFAEFL +  + +++    E LR+  +   K   G I
Subjt:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
XP_004134112.1 calmodulin-like protein 11 [Cucumis sativus]2.4e-0857.81Show/hide
Query:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
        RSLDQNPTEEELQDMIKEVD DGNGTIEFAEFL +  + +++    E L++  +   K   G I
Subjt:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
XP_021899590.1 calmodulin-like protein 8 [Carica papaya]3.1e-0857.81Show/hide
Query:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
        RSLDQNPTEEELQDMI EVDADGNGTIEFAEFL +  + +++    E L++  +   K   G I
Subjt:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
XP_022138077.1 calmodulin-like protein 11 [Momordica charantia]3.1e-0857.81Show/hide
Query:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
        RSLDQNPTEEELQDMIKEVDADGNGTIEF EFL +  + +++    E L++  +   K   G I
Subjt:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
XP_022979563.1 calmodulin-like protein 11 [Cucurbita maxima]3.1e-0857.81Show/hide
Query:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
        RSLDQNPTEEELQDMI EVDADGNGTIEFAEFL +  + +++    E L++  +   K   G I
Subjt:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
TrEMBL top hitse value%identityAlignment
A0A0A0LA37 Uncharacterized protein1.2e-0857.81Show/hide
Query:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
        RSLDQNPTEEELQDMIKEVD DGNGTIEFAEFL +  + +++    E L++  +   K   G I
Subjt:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
A0A1S3AWW8 calmodulin-like protein 111.2e-0857.81Show/hide
Query:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
        RSLDQNPTEEELQDMIKEVD DGNGTIEFAEFL +  + +++    E L++  +   K   G I
Subjt:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
A0A3S8V2I0 Calmodulin-like protein 81.5e-0857.81Show/hide
Query:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
        RSLDQNPTEEELQDMI EVDADGNGTIEFAEFL +  + +++    E L++  +   K   G I
Subjt:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
A0A5A7U6X6 Calmodulin-like protein 11 isoform X21.2e-0857.81Show/hide
Query:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
        RSLDQNPTEEELQDMIKEVD DGNGTIEFAEFL +  + +++    E L++  +   K   G I
Subjt:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
A0A6J1IWM2 calmodulin-like protein 111.5e-0857.81Show/hide
Query:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
        RSLDQNPTEEELQDMI EVDADGNGTIEFAEFL +  + +++    E L++  +   K   G I
Subjt:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
SwissProt top hitse value%identityAlignment
A2WN93 Calmodulin-11.5e-0854.69Show/hide
Query:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
        RSL QNPTE ELQDMI EVDADGNGTI+F EFL +  R ++     E L++  R   K   G I
Subjt:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
P62200 Calmodulin-1/11/161.5e-0854.69Show/hide
Query:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
        RSL QNPTE ELQDMI EVDADGNGTI+F EFL +  R ++     E L++  R   K   G I
Subjt:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
Q0JNS6 Calmodulin-11.5e-0854.69Show/hide
Query:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
        RSL QNPTE ELQDMI EVDADGNGTI+F EFL +  R ++     E L++  R   K   G I
Subjt:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
Q41420 Putative calmodulin-3 (Fragment)8.5e-0954.69Show/hide
Query:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
        RSL QNPTE ELQDMI EVDADGNGTI+F EFL +  R ++     E L++  R   K   G I
Subjt:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
Q9LIK5 Calmodulin-like protein 112.2e-0984.85Show/hide
Query:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL
        RSLDQNPTE+ELQDMI E+D+DGNGTIEF+EFL
Subjt:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL
Arabidopsis top hitse value%identityAlignment
AT2G27030.1 calmodulin 51.0e-0954.69Show/hide
Query:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
        RSL QNPTE ELQDMI EVDADGNGTI+F EFL +  R ++     E L++  R   K   G I
Subjt:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
AT2G27030.2 calmodulin 51.0e-0954.69Show/hide
Query:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
        RSL QNPTE ELQDMI EVDADGNGTI+F EFL +  R ++     E L++  R   K   G I
Subjt:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
AT2G27030.3 calmodulin 51.0e-0954.69Show/hide
Query:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
        RSL QNPTE ELQDMI EVDADGNGTI+F EFL +  R ++     E L++  R   K   G I
Subjt:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
AT2G41110.1 calmodulin 21.0e-0954.69Show/hide
Query:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
        RSL QNPTE ELQDMI EVDADGNGTI+F EFL +  R ++     E L++  R   K   G I
Subjt:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL-IFCRTVEQRIVLEGLRDQHRNEWKQMKGKI
AT3G22930.1 calmodulin-like 111.6e-1084.85Show/hide
Query:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL
        RSLDQNPTE+ELQDMI E+D+DGNGTIEF+EFL
Subjt:  RSLDQNPTEEELQDMIKEVDADGNGTIEFAEFL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGATAGTAGTCGGAAGTTTGGAATGGCTCCGAGGCATGGTCGGATTTAAATCGTCGGGTAGGACGGCGATGGTAAGCTCCCCTGTTTTCATTCGATTTTCTTTTCGTTT
ACAGAGCGTTTTAAAAGGTGCATTAGTTTTGAGGAATTGGCGATCGTTGGATCAGAATCCGACGGAGGAGGAACTTCAGGACATGATCAAGGAAGTCGACGCCGACGGCA
ATGGAACTATCGAATTTGCCGAGTTTCTCATTTTTTGTCGGACGGTGGAACAAAGAATTGTTTTAGAAGGCTTGCGTGATCAGCATAGAAATGAATGGAAACAAATGAAA
GGAAAGATTTAG
mRNA sequenceShow/hide mRNA sequence
TTGATAGTAGTCGGAAGTTTGGAATGGCTCCGAGGCATGGTCGGATTTAAATCGTCGGGTAGGACGGCGATGGTAAGCTCCCCTGTTTTCATTCGATTTTCTTTTCGTTT
ACAGAGCGTTTTAAAAGGTGCATTAGTTTTGAGGAATTGGCGATCGTTGGATCAGAATCCGACGGAGGAGGAACTTCAGGACATGATCAAGGAAGTCGACGCCGACGGCA
ATGGAACTATCGAATTTGCCGAGTTTCTCATTTTTTGTCGGACGGTGGAACAAAGAATTGTTTTAGAAGGCTTGCGTGATCAGCATAGAAATGAATGGAAACAAATGAAA
GGAAAGATTTAG
Protein sequenceShow/hide protein sequence
LIVVGSLEWLRGMVGFKSSGRTAMVSSPVFIRFSFRLQSVLKGALVLRNWRSLDQNPTEEELQDMIKEVDADGNGTIEFAEFLIFCRTVEQRIVLEGLRDQHRNEWKQMK
GKI