; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G021210 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G021210
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Genome locationchr02:27384584..27388549
RNA-Seq ExpressionLsi02G021210
SyntenyLsi02G021210
Gene Ontology termsGO:0045039 - protein insertion into mitochondrial inner membrane (biological process)
GO:0071806 - protein transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0042721 - TIM22 mitochondrial import inner membrane insertion complex (cellular component)
GO:0008320 - protein transmembrane transporter activity (molecular function)
GO:0030943 - mitochondrion targeting sequence binding (molecular function)
InterPro domainsIPR039175 - Mitochondrial import inner membrane translocase subunit TIM22


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593015.1 hypothetical protein SDJN03_12491, partial [Cucurbita argyrosperma subsp. sororia]1.1e-8982.03Show/hide
Query:  MLSKAGMDSSGPPKALNSDTPSSSSFSSSSSSNYVDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVVGCYCGAREYVRVSRRSEP
        MLS+A MDS G PK L+SDTP SSS SSSSSSNY DWKERI FPT+LAGF+GGGAGLVSK+RKVHGLANISATYATNLSIV  CYCGARE+VRVSRRSEP
Subjt:  MLSKAGMDSSGPPKALNSDTPSSSSFSSSSSSNYVDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVVGCYCGAREYVRVSRRSEP

Query:  DDLMNSAIAGFGTGALLGRLQVSWTGMSQRKGGRLGSVRYSLIFTVVGTSVDYATLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKQARE
        DDLMNSAIAGFGTGALLGRLQ          GGRLGSVRYS++FTV GT++DYATLKLKPV RSYKE+I+EESSSWMKLPEWSPIQVLDEEALAAKQARE
Subjt:  DDLMNSAIAGFGTGALLGRLQVSWTGMSQRKGGRLGSVRYSLIFTVVGTSVDYATLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKQARE

Query:  QQVYAQRALGQLNKNDP
        QQ+YAQR LGQ+N+ DP
Subjt:  QQVYAQRALGQLNKNDP

XP_004149781.1 uncharacterized protein LOC101211202 [Cucumis sativus]2.1e-8583.17Show/hide
Query:  SGPPKALNSDTPSSSSFSSSSSSNYVDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVVGCYCGAREYVRVSRRSEPDDLMNSAIA
        S  PK  NSDTP    FSSS+SS+Y  WKERIF+PTLLAG VGGGAGL+SKYRKVHGLANISATYATNLSIV  CYCGARE+VRVSRRSEPDDLMNSAIA
Subjt:  SGPPKALNSDTPSSSSFSSSSSSNYVDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVVGCYCGAREYVRVSRRSEPDDLMNSAIA

Query:  GFGTGALLGRLQVSWTGMSQRKGGRLGSVRYSLIFTVVGTSVDYATLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKQAREQQVYAQRAL
        GFGTGALLGRLQ          GGRLGSVRYSL+FT+VGT+VDYATLKLKP LRSYKESIIE SSSWMKLPEWSPIQVLDEEALAAKQAREQQ+YAQRAL
Subjt:  GFGTGALLGRLQVSWTGMSQRKGGRLGSVRYSLIFTVVGTSVDYATLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKQAREQQVYAQRAL

Query:  GQLNKNDP
        GQLNK DP
Subjt:  GQLNKNDP

XP_008458054.1 PREDICTED: uncharacterized protein LOC103497594 [Cucumis melo]2.7e-8582.69Show/hide
Query:  SGPPKALNSDTPSSSSFSSSSSSNYVDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVVGCYCGAREYVRVSRRSEPDDLMNSAIA
        S  PK  NSDTP    FSSS+SS+Y  WKERIF+PTLLAG VGGGAGL+SKYRK+HGLANISATYATNLSIV  CYCGARE+VRVSRRSEPDDLMNSAIA
Subjt:  SGPPKALNSDTPSSSSFSSSSSSNYVDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVVGCYCGAREYVRVSRRSEPDDLMNSAIA

Query:  GFGTGALLGRLQVSWTGMSQRKGGRLGSVRYSLIFTVVGTSVDYATLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKQAREQQVYAQRAL
        GFGTGALLGRLQ          GG+LGSVRYSLIFT+VGT+VDYATLKLKP LRSYKESIIE SSSWMKLPEWSPIQVLDEEALAAKQAREQQ+YAQRAL
Subjt:  GFGTGALLGRLQVSWTGMSQRKGGRLGSVRYSLIFTVVGTSVDYATLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKQAREQQVYAQRAL

Query:  GQLNKNDP
        GQLNK DP
Subjt:  GQLNKNDP

XP_022960027.1 uncharacterized protein LOC111460899 [Cucurbita moschata]9.0e-8982.19Show/hide
Query:  MLSKAGMDSSGPPKALNSDTP--SSSSFSSSSSSNYVDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVVGCYCGAREYVRVSRRS
        MLS+A MDS G PK L+SDTP  SSSS S SSSSNY DWKERI FPT+LAGFVGGGAGLVSK+RKVHGLANISATYATNLSIV  CYCGARE+VRVSRRS
Subjt:  MLSKAGMDSSGPPKALNSDTP--SSSSFSSSSSSNYVDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVVGCYCGAREYVRVSRRS

Query:  EPDDLMNSAIAGFGTGALLGRLQVSWTGMSQRKGGRLGSVRYSLIFTVVGTSVDYATLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKQA
        EPDDLMNSAIAGFGTGALLGRLQ          GGRLGSVRYS++FTV GT++DYATLKLKPV RSYKE+I+EESSSWMKLPEWSPIQVLDEEALAAKQA
Subjt:  EPDDLMNSAIAGFGTGALLGRLQVSWTGMSQRKGGRLGSVRYSLIFTVVGTSVDYATLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKQA

Query:  REQQVYAQRALGQLNKNDP
        REQQ+YAQR LGQ+NK DP
Subjt:  REQQVYAQRALGQLNKNDP

XP_038896923.1 uncharacterized protein LOC120085132 [Benincasa hispida]1.9e-9188.63Show/hide
Query:  MDSSGPPKALNSDTPSSSSFSSSSSSNYVDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVVGCYCGAREYVRVSRRSEPDDLMNS
        MDSSG PKAL+SDTPS S  SSSSSSNY DWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIV GCYCGARE+VRVSRRSEPDDLMNS
Subjt:  MDSSGPPKALNSDTPSSSSFSSSSSSNYVDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVVGCYCGAREYVRVSRRSEPDDLMNS

Query:  AIAGFGTGALLGRLQVSWTGMSQRKGGRLGSVRYSLIFTVVGTSVDYATLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKQAREQQVYAQ
        AIAGFGTGALLGRLQ          GG+LGSVRYSLIFTVVGT+VDYATLKLKPVLRSYKESI EESSSWMKLPEWSPI+VLDEEALAAKQAREQQ+YAQ
Subjt:  AIAGFGTGALLGRLQVSWTGMSQRKGGRLGSVRYSLIFTVVGTSVDYATLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKQAREQQVYAQ

Query:  RALGQLNKNDP
        RALGQLNK DP
Subjt:  RALGQLNKNDP

TrEMBL top hitse value%identityAlignment
A0A0A0K6T5 Uncharacterized protein1.0e-8583.17Show/hide
Query:  SGPPKALNSDTPSSSSFSSSSSSNYVDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVVGCYCGAREYVRVSRRSEPDDLMNSAIA
        S  PK  NSDTP    FSSS+SS+Y  WKERIF+PTLLAG VGGGAGL+SKYRKVHGLANISATYATNLSIV  CYCGARE+VRVSRRSEPDDLMNSAIA
Subjt:  SGPPKALNSDTPSSSSFSSSSSSNYVDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVVGCYCGAREYVRVSRRSEPDDLMNSAIA

Query:  GFGTGALLGRLQVSWTGMSQRKGGRLGSVRYSLIFTVVGTSVDYATLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKQAREQQVYAQRAL
        GFGTGALLGRLQ          GGRLGSVRYSL+FT+VGT+VDYATLKLKP LRSYKESIIE SSSWMKLPEWSPIQVLDEEALAAKQAREQQ+YAQRAL
Subjt:  GFGTGALLGRLQVSWTGMSQRKGGRLGSVRYSLIFTVVGTSVDYATLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKQAREQQVYAQRAL

Query:  GQLNKNDP
        GQLNK DP
Subjt:  GQLNKNDP

A0A1S3C726 uncharacterized protein LOC1034975941.3e-8582.69Show/hide
Query:  SGPPKALNSDTPSSSSFSSSSSSNYVDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVVGCYCGAREYVRVSRRSEPDDLMNSAIA
        S  PK  NSDTP    FSSS+SS+Y  WKERIF+PTLLAG VGGGAGL+SKYRK+HGLANISATYATNLSIV  CYCGARE+VRVSRRSEPDDLMNSAIA
Subjt:  SGPPKALNSDTPSSSSFSSSSSSNYVDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVVGCYCGAREYVRVSRRSEPDDLMNSAIA

Query:  GFGTGALLGRLQVSWTGMSQRKGGRLGSVRYSLIFTVVGTSVDYATLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKQAREQQVYAQRAL
        GFGTGALLGRLQ          GG+LGSVRYSLIFT+VGT+VDYATLKLKP LRSYKESIIE SSSWMKLPEWSPIQVLDEEALAAKQAREQQ+YAQRAL
Subjt:  GFGTGALLGRLQVSWTGMSQRKGGRLGSVRYSLIFTVVGTSVDYATLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKQAREQQVYAQRAL

Query:  GQLNKNDP
        GQLNK DP
Subjt:  GQLNKNDP

A0A5A7SIX7 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein1.3e-8582.69Show/hide
Query:  SGPPKALNSDTPSSSSFSSSSSSNYVDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVVGCYCGAREYVRVSRRSEPDDLMNSAIA
        S  PK  NSDTP    FSSS+SS+Y  WKERIF+PTLLAG VGGGAGL+SKYRK+HGLANISATYATNLSIV  CYCGARE+VRVSRRSEPDDLMNSAIA
Subjt:  SGPPKALNSDTPSSSSFSSSSSSNYVDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVVGCYCGAREYVRVSRRSEPDDLMNSAIA

Query:  GFGTGALLGRLQVSWTGMSQRKGGRLGSVRYSLIFTVVGTSVDYATLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKQAREQQVYAQRAL
        GFGTGALLGRLQ          GG+LGSVRYSLIFT+VGT+VDYATLKLKP LRSYKESIIE SSSWMKLPEWSPIQVLDEEALAAKQAREQQ+YAQRAL
Subjt:  GFGTGALLGRLQVSWTGMSQRKGGRLGSVRYSLIFTVVGTSVDYATLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKQAREQQVYAQRAL

Query:  GQLNKNDP
        GQLNK DP
Subjt:  GQLNKNDP

A0A6J1DTZ3 uncharacterized protein LOC1110239754.2e-8480.57Show/hide
Query:  MDSSGPPKALNSDTPSSSSFSSSSSSNYVDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVVGCYCGAREYVRVSRRSEPDDLMNS
        MDS   PK L+S+TPSSSS SSSSSSNY DWK+RIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYA NLSIV  CYCGARE+VRV R+SEPDDLMNS
Subjt:  MDSSGPPKALNSDTPSSSSFSSSSSSNYVDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVVGCYCGAREYVRVSRRSEPDDLMNS

Query:  AIAGFGTGALLGRLQVSWTGMSQRKGGRLGSVRYSLIFTVVGTSVDYATLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKQAREQQVYAQ
        AIAGFGTGA+LGRLQ          GG+LGSVRYSL+FTVVGT+ DYATLKL+P  RSYKES+ EES +WMKLPEWSPIQVLDEEALAAKQAREQQ+YAQ
Subjt:  AIAGFGTGALLGRLQVSWTGMSQRKGGRLGSVRYSLIFTVVGTSVDYATLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKQAREQQVYAQ

Query:  RALGQLNKNDP
        R LGQLNK +P
Subjt:  RALGQLNKNDP

A0A6J1H677 uncharacterized protein LOC1114608994.4e-8982.19Show/hide
Query:  MLSKAGMDSSGPPKALNSDTP--SSSSFSSSSSSNYVDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVVGCYCGAREYVRVSRRS
        MLS+A MDS G PK L+SDTP  SSSS S SSSSNY DWKERI FPT+LAGFVGGGAGLVSK+RKVHGLANISATYATNLSIV  CYCGARE+VRVSRRS
Subjt:  MLSKAGMDSSGPPKALNSDTP--SSSSFSSSSSSNYVDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVVGCYCGAREYVRVSRRS

Query:  EPDDLMNSAIAGFGTGALLGRLQVSWTGMSQRKGGRLGSVRYSLIFTVVGTSVDYATLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKQA
        EPDDLMNSAIAGFGTGALLGRLQ          GGRLGSVRYS++FTV GT++DYATLKLKPV RSYKE+I+EESSSWMKLPEWSPIQVLDEEALAAKQA
Subjt:  EPDDLMNSAIAGFGTGALLGRLQVSWTGMSQRKGGRLGSVRYSLIFTVVGTSVDYATLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKQA

Query:  REQQVYAQRALGQLNKNDP
        REQQ+YAQR LGQ+NK DP
Subjt:  REQQVYAQRALGQLNKNDP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G25120.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein3.7e-4857.39Show/hide
Query:  ERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVVGCYCGAREYVRVSRRSEPDDLMNSAIAGFGTGALLGRLQVSWTGMSQRKGGRLGSV
        +R+   +LLAG +GGGAGLVSK+R  H   NI   YA N +IV GCYCGARE VR++RRSE DDLMNSAI G  +GALLGRLQ          GG  G++
Subjt:  ERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVVGCYCGAREYVRVSRRSEPDDLMNSAIAGFGTGALLGRLQVSWTGMSQRKGGRLGSV

Query:  RYSLIFTVVGTSVDYATLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKQAREQQVYAQRALGQLNK
        RYSL+F  VGT+ DYATLK KP+L SY+      +    KLPEWSPI+VLDEEALA K+A E++++ +R LG+LNK
Subjt:  RYSLIFTVVGTSVDYATLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKQAREQQVYAQRALGQLNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTCTAAAGCTGGAATGGATTCATCCGGTCCTCCAAAAGCCCTAAATTCTGACACTCCTTCTTCTTCTTCTTTTTCTTCTTCTTCTTCTTCAAACTATGTCGATTG
GAAGGAACGTATCTTCTTTCCCACTCTTCTCGCAGGGTTTGTTGGGGGAGGAGCTGGGCTAGTGTCCAAGTATCGGAAAGTTCATGGCCTCGCTAACATTTCTGCGACTT
ATGCTACAAATTTATCCATTGTTGTTGGTTGCTACTGCGGTGCACGTGAGTATGTTAGAGTTTCTCGAAGGTCAGAACCTGATGATCTTATGAACTCTGCAATAGCAGGT
TTTGGAACTGGGGCTCTTCTTGGACGCCTTCAAGTTTCCTGGACAGGAATGAGTCAGAGAAAAGGTGGTCGACTCGGCTCTGTTCGATACTCGTTGATCTTCACTGTTGT
TGGGACATCAGTAGATTATGCCACGCTTAAACTAAAACCTGTTTTAAGAAGCTACAAAGAATCGATAATTGAAGAAAGTAGTAGCTGGATGAAATTACCAGAATGGTCCC
CTATTCAAGTTCTTGATGAGGAAGCTTTAGCTGCTAAACAAGCTCGAGAGCAACAGGTCTACGCACAGAGAGCACTTGGGCAATTAAACAAAAATGATCCTTGA
mRNA sequenceShow/hide mRNA sequence
TTTACATTAATCAGAGGCCGATGACTGACAGTGACGCCTTTTTTCCATAGTTTTGATATTCATTTGTTCGATCGTTGCATTTGGCGTCGGATGCTCTCTAAAGCTGGAAT
GGATTCATCCGGTCCTCCAAAAGCCCTAAATTCTGACACTCCTTCTTCTTCTTCTTTTTCTTCTTCTTCTTCTTCAAACTATGTCGATTGGAAGGAACGTATCTTCTTTC
CCACTCTTCTCGCAGGGTTTGTTGGGGGAGGAGCTGGGCTAGTGTCCAAGTATCGGAAAGTTCATGGCCTCGCTAACATTTCTGCGACTTATGCTACAAATTTATCCATT
GTTGTTGGTTGCTACTGCGGTGCACGTGAGTATGTTAGAGTTTCTCGAAGGTCAGAACCTGATGATCTTATGAACTCTGCAATAGCAGGTTTTGGAACTGGGGCTCTTCT
TGGACGCCTTCAAGTTTCCTGGACAGGAATGAGTCAGAGAAAAGGTGGTCGACTCGGCTCTGTTCGATACTCGTTGATCTTCACTGTTGTTGGGACATCAGTAGATTATG
CCACGCTTAAACTAAAACCTGTTTTAAGAAGCTACAAAGAATCGATAATTGAAGAAAGTAGTAGCTGGATGAAATTACCAGAATGGTCCCCTATTCAAGTTCTTGATGAG
GAAGCTTTAGCTGCTAAACAAGCTCGAGAGCAACAGGTCTACGCACAGAGAGCACTTGGGCAATTAAACAAAAATGATCCTTGAGTCTATTTTCCCCATTGATCATGGAA
GAAAGGATCTGAAGTTTTTGTTTTTTTTTTTTGTTATACCATATGGTGGGAACTAATGATAATAAGAAGAGAATGCTGATAATTGACATTTTTGTTTTTCTTCTTGCAGG
TGCTGCACTTTATTTTTCTTTCTTGTATTATACAAATTTTCTTTATAATCTAAATGTTGCCCAACTTCATATTCAATTTCGTAATTATGTTTCATAAAAATGATTAATGG
TGATATGATCATAACATAAAGTGTTCTTTTTTTTTTTGGAGGAAAA
Protein sequenceShow/hide protein sequence
MLSKAGMDSSGPPKALNSDTPSSSSFSSSSSSNYVDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVVGCYCGAREYVRVSRRSEPDDLMNSAIAG
FGTGALLGRLQVSWTGMSQRKGGRLGSVRYSLIFTVVGTSVDYATLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKQAREQQVYAQRALGQLNKNDP