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Lsi02G021380 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G021380
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEPIDERMAL PATTERNING FACTOR-like protein 9
Genome locationchr02:27705773..27707743
RNA-Seq ExpressionLsi02G021380
SyntenyLsi02G021380
Gene Ontology termsGO:2000123 - positive regulation of stomatal complex development (biological process)
InterPro domainsIPR031753 - Stomagen
IPR038572 - Stomagen, C-terminal domain superfamily
IPR044858 - Stomagen, C-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022959844.1 EPIDERMAL PATTERNING FACTOR-like protein 9 [Cucurbita moschata]9.0e-2966.36Show/hide
Query:  MAKAAKPVSVLLLLLLTLIMTFLFSTMA-DSRYRLNSFLYKQQSHSSFAFVLGKDAKLRNSRRLMIGSTAPICTYNECRGCRYKCRAEQVPVEGNDPINS
        MAKAAKP+  LLLLLL LI+  L STMA   R+     L+ +      +       ++RNSRRLMIGSTAPICTYNECRGC+YKCRAEQVPVEGNDPINS
Subjt:  MAKAAKPVSVLLLLLLTLIMTFLFSTMA-DSRYRLNSFLYKQQSHSSFAFVLGKDAKLRNSRRLMIGSTAPICTYNECRGCRYKCRAEQVPVEGNDPINS

Query:  AYHYRCVCHR
        AYHYRCVCHR
Subjt:  AYHYRCVCHR

XP_031745006.1 EPIDERMAL PATTERNING FACTOR-like protein 9 isoform X1 [Cucumis sativus]1.5e-2861.21Show/hide
Query:  MAKAAKPVSVLLLLLLTLIMTFLFSTMADSRYRLNSFLYKQQSHSSFAFVL-------GKDAKLRNSRRLMIGSTAPICTYNECRGCRYKCRAEQVPVEG
        MAKAAKP+SVLLLLLL L++  LF T   S   +  F  + +    F+ +        G+  +LR  RR+MIGSTAP CTYNECRGC+YKCRAEQVPVEG
Subjt:  MAKAAKPVSVLLLLLLTLIMTFLFSTMADSRYRLNSFLYKQQSHSSFAFVL-------GKDAKLRNSRRLMIGSTAPICTYNECRGCRYKCRAEQVPVEG

Query:  NDPINSAYHYRCVCHR
        NDPINSAYHYRCVCHR
Subjt:  NDPINSAYHYRCVCHR

XP_031745007.1 EPIDERMAL PATTERNING FACTOR-like protein 9 isoform X2 [Cucumis sativus]1.5e-2861.21Show/hide
Query:  MAKAAKPVSVLLLLLLTLIMTFLFSTMADSRYRLNSFLYKQQSHSSFAFVL-------GKDAKLRNSRRLMIGSTAPICTYNECRGCRYKCRAEQVPVEG
        MAKAAKP+SVLLLLLL L++  LF T   S   +  F  + +    F+ +        G+  +LR  RR+MIGSTAP CTYNECRGC+YKCRAEQVPVEG
Subjt:  MAKAAKPVSVLLLLLLTLIMTFLFSTMADSRYRLNSFLYKQQSHSSFAFVL-------GKDAKLRNSRRLMIGSTAPICTYNECRGCRYKCRAEQVPVEG

Query:  NDPINSAYHYRCVCHR
        NDPINSAYHYRCVCHR
Subjt:  NDPINSAYHYRCVCHR

XP_031745008.1 EPIDERMAL PATTERNING FACTOR-like protein 9 isoform X3 [Cucumis sativus]1.5e-2861.21Show/hide
Query:  MAKAAKPVSVLLLLLLTLIMTFLFSTMADSRYRLNSFLYKQQSHSSFAFVL-------GKDAKLRNSRRLMIGSTAPICTYNECRGCRYKCRAEQVPVEG
        MAKAAKP+SVLLLLLL L++  LF T   S   +  F  + +    F+ +        G+  +LR  RR+MIGSTAP CTYNECRGC+YKCRAEQVPVEG
Subjt:  MAKAAKPVSVLLLLLLTLIMTFLFSTMADSRYRLNSFLYKQQSHSSFAFVL-------GKDAKLRNSRRLMIGSTAPICTYNECRGCRYKCRAEQVPVEG

Query:  NDPINSAYHYRCVCHR
        NDPINSAYHYRCVCHR
Subjt:  NDPINSAYHYRCVCHR

XP_038899071.1 EPIDERMAL PATTERNING FACTOR-like protein 9 [Benincasa hispida]3.2e-3476.58Show/hide
Query:  MAKAAKPVSVLLLLLLTLIMTFLFSTMADSRYRLNSFLYKQQSHSSFAFVL--GKDAKLRNSRRLMIGSTAPICTYNECRGCRYKCRAEQVPVEGNDPIN
        MAKAAKPVSV LLLLLTLIMTFLFSTMA   +   S  +  Q  S  A +   GK+ K+RNSRRLMIGSTAPICTYNECRGC+YKCRAEQVPVEGNDPIN
Subjt:  MAKAAKPVSVLLLLLLTLIMTFLFSTMADSRYRLNSFLYKQQSHSSFAFVL--GKDAKLRNSRRLMIGSTAPICTYNECRGCRYKCRAEQVPVEGNDPIN

Query:  SAYHYRCVCHR
        SAYHYRCVCHR
Subjt:  SAYHYRCVCHR

TrEMBL top hitse value%identityAlignment
A0A059A3T1 Uncharacterized protein4.2e-2455.86Show/hide
Query:  MAKAAKPVSVLLLLLLTLIMTFLFSTMADSRYRLNSFLYKQQSHSSFAFVLGKDAKL--RNSRRLMIGSTAPICTYNECRGCRYKCRAEQVPVEGNDPIN
        MAK   P+ +LLL  L L  + +  +  +  Y + S L ++ +HS    + G++ +   ++SRRLMIGST PICTYNECRGC+Y+CRAEQVPVEGNDPIN
Subjt:  MAKAAKPVSVLLLLLLTLIMTFLFSTMADSRYRLNSFLYKQQSHSSFAFVLGKDAKL--RNSRRLMIGSTAPICTYNECRGCRYKCRAEQVPVEGNDPIN

Query:  SAYHYRCVCHR
        SAYHYRCVCHR
Subjt:  SAYHYRCVCHR

A0A444XDR9 EPIDERMAL PATTERNING FACTOR-like protein2.5e-2489.47Show/hide
Query:  KDAKLRNSRRLMIGSTAPICTYNECRGCRYKCRAEQVPVEGNDPINSAYHYRCVCHR
        K+ K+RNSRRLMIGSTAP CTYNECRGC+YKCRAEQVPVEGNDPINS YHYRCVCHR
Subjt:  KDAKLRNSRRLMIGSTAPICTYNECRGCRYKCRAEQVPVEGNDPINSAYHYRCVCHR

A0A6J1DR94 uncharacterized protein LOC1110236011.4e-2766.07Show/hide
Query:  MAKAAKPVSVLLLLL-LTLIMTFLFSTMADSRYRLNSFLYKQQSHSSFAFVLGKDAKLRNS--RRLMIGSTAPICTYNECRGCRYKCRAEQVPVEGNDPI
        MAKAAKP SVLLLLL L +++     T  +    L   L  Q S  S     GK+  LRNS  RRLMIGSTAP CTYNECRGC+YKCRAEQVPVEGNDPI
Subjt:  MAKAAKPVSVLLLLL-LTLIMTFLFSTMADSRYRLNSFLYKQQSHSSFAFVLGKDAKLRNS--RRLMIGSTAPICTYNECRGCRYKCRAEQVPVEGNDPI

Query:  NSAYHYRCVCHR
        NSAYHYRCVCHR
Subjt:  NSAYHYRCVCHR

A0A6J1H996 EPIDERMAL PATTERNING FACTOR-like protein 94.3e-2966.36Show/hide
Query:  MAKAAKPVSVLLLLLLTLIMTFLFSTMA-DSRYRLNSFLYKQQSHSSFAFVLGKDAKLRNSRRLMIGSTAPICTYNECRGCRYKCRAEQVPVEGNDPINS
        MAKAAKP+  LLLLLL LI+  L STMA   R+     L+ +      +       ++RNSRRLMIGSTAPICTYNECRGC+YKCRAEQVPVEGNDPINS
Subjt:  MAKAAKPVSVLLLLLLTLIMTFLFSTMA-DSRYRLNSFLYKQQSHSSFAFVLGKDAKLRNSRRLMIGSTAPICTYNECRGCRYKCRAEQVPVEGNDPINS

Query:  AYHYRCVCHR
        AYHYRCVCHR
Subjt:  AYHYRCVCHR

A0A6J1KTW3 EPIDERMAL PATTERNING FACTOR-like protein 94.8e-2865.45Show/hide
Query:  MAKAAKPVSVLLLLLLTLIMTFLFSTMA-DSRYRLNSFLYKQQSHSSFAFVLGKDAKLRNSRRLMIGSTAPICTYNECRGCRYKCRAEQVPVEGNDPINS
        MAKAAKP  +LLLLLL LI+  L STMA   R+     ++ +      +       ++RNSRRLMIGSTAPICTYNECRGC+YKCRAEQVPVEGNDPINS
Subjt:  MAKAAKPVSVLLLLLLTLIMTFLFSTMA-DSRYRLNSFLYKQQSHSSFAFVLGKDAKLRNSRRLMIGSTAPICTYNECRGCRYKCRAEQVPVEGNDPINS

Query:  AYHYRCVCHR
        AYHYRCVCHR
Subjt:  AYHYRCVCHR

SwissProt top hitse value%identityAlignment
Q9SV72 EPIDERMAL PATTERNING FACTOR-like protein 93.1e-2490.57Show/hide
Query:  LRNSRRLMIGSTAPICTYNECRGCRYKCRAEQVPVEGNDPINSAYHYRCVCHR
        L + RR MIGSTAP CTYNECRGCRYKCRAEQVPVEGNDPINSAYHYRCVCHR
Subjt:  LRNSRRLMIGSTAPICTYNECRGCRYKCRAEQVPVEGNDPINSAYHYRCVCHR

Arabidopsis top hitse value%identityAlignment
AT4G12970.1 stomagen2.2e-2590.57Show/hide
Query:  LRNSRRLMIGSTAPICTYNECRGCRYKCRAEQVPVEGNDPINSAYHYRCVCHR
        L + RR MIGSTAP CTYNECRGCRYKCRAEQVPVEGNDPINSAYHYRCVCHR
Subjt:  LRNSRRLMIGSTAPICTYNECRGCRYKCRAEQVPVEGNDPINSAYHYRCVCHR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAAGCTGCAAAACCAGTTTCAGTACTTCTTCTTCTTCTTCTAACCCTAATTATGACCTTTCTTTTCTCAACAATGGCAGATTCTCGTTACCGTCTCAATTCTTT
TCTCTACAAACAACAATCGCACTCGAGTTTTGCATTTGTGTTGGGGAAAGATGCAAAGTTGAGAAATTCAAGAAGGTTGATGATTGGTTCAACAGCACCAATATGTACTT
ACAATGAATGTAGAGGATGCAGATACAAATGCAGAGCTGAGCAAGTACCTGTGGAAGGCAATGATCCAATCAATAGTGCATATCACTATAGATGTGTTTGTCATAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAAGCTGCAAAACCAGTTTCAGTACTTCTTCTTCTTCTTCTAACCCTAATTATGACCTTTCTTTTCTCAACAATGGCAGATTCTCGTTACCGTCTCAATTCTTT
TCTCTACAAACAACAATCGCACTCGAGTTTTGCATTTGTGTTGGGGAAAGATGCAAAGTTGAGAAATTCAAGAAGGTTGATGATTGGTTCAACAGCACCAATATGTACTT
ACAATGAATGTAGAGGATGCAGATACAAATGCAGAGCTGAGCAAGTACCTGTGGAAGGCAATGATCCAATCAATAGTGCATATCACTATAGATGTGTTTGTCATAGGTAA
ATATTATTAATTACTTCCCATTTTCTTTCTTTTAATTACATGACAGATTTCAATCCTTAATCAACTTTAGTTTATTTTGTTGGTCTCACAACAAATTTTGGTGTCTTTTT
TTCATAATGTAATTTTTTTTTCAATTGATTGAGAGTTTGTCGTTCTTTTTTTTGTTATGGTTAAGTTGGTGTAAGTGACTCGAAATATTCTATTTTTGAAATTTCTATCG
TATATTTTGTTTTATATTCTCA
Protein sequenceShow/hide protein sequence
MAKAAKPVSVLLLLLLTLIMTFLFSTMADSRYRLNSFLYKQQSHSSFAFVLGKDAKLRNSRRLMIGSTAPICTYNECRGCRYKCRAEQVPVEGNDPINSAYHYRCVCHR