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Lsi02G021430 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G021430
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMitochondrial import inner membrane translocase subunit Tim21
Genome locationchr02:27785670..27786140
RNA-Seq ExpressionLsi02G021430
SyntenyLsi02G021430
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9463710.1 hypothetical protein C3L33_04389, partial [Rhododendron williamsianum]2.1e-0741.13Show/hide
Query:  DRRSNLPDLVQRLSLWRNFDGDEDHQPAIGRFSSDVPEREGKRRRRKNRGVGRNVEGTDGGGVAGE--SGKECLRSNHAIGGGVDGPSNPASGARRRGEK
        DR +NLP+LV RL + R     ED   A+  F + V +   +     NR VG +V G D  G       G+E L + HA  G VDGP NP  G   R + 
Subjt:  DRRSNLPDLVQRLSLWRNFDGDEDHQPAIGRFSSDVPEREGKRRRRKNRGVGRNVEGTDGGGVAGE--SGKECLRSNHAIGGGVDGPSNPASGARRRGEK

Query:  GNGERGIFGIVGPVEKGVEMGEILAMGE-GSVGEGLRRASE
        G+GE G  G VGPVE+GVE+ ++ A+G    V EGL + SE
Subjt:  GNGERGIFGIVGPVEKGVEMGEILAMGE-GSVGEGLRRASE

KAF7154714.1 hypothetical protein RHSIM_Rhsim01G0249300 [Rhododendron simsii]4.7e-0741.41Show/hide
Query:  DRRSNLPDLVQRLSLWRNFDGDEDHQPAIGRFSSDVPEREGKRRRRKN-RGVGRNVEGTDGGGVAGE--SGKECLRSNHAIGGGVDGPSNPASGARRRGE
        DR +NLP+LV RL + R     +D   A+  F + V  R+  R    + R VG +V G D  G       G+E L + HA  G VDGP NP  G   RG 
Subjt:  DRRSNLPDLVQRLSLWRNFDGDEDHQPAIGRFSSDVPEREGKRRRRKN-RGVGRNVEGTDGGGVAGE--SGKECLRSNHAIGGGVDGPSNPASGARRRGE

Query:  KGNGERGIFGIVGPVEKGVEMGEILAMG
         G+GE G  G VGPVE GVE+ ++ A+G
Subjt:  KGNGERGIFGIVGPVEKGVEMGEILAMG

RWR74643.1 putative mitochondrial import inner membrane translocase subunit TIM21 [Cinnamomum micranthum f. kanehirae]2.2e-0455.36Show/hide
Query:  GKECLRSNHAIGGGVDGPSNPASGARRRGEKGNGERGIFGIVGPVEKGVEMGEILA
        G + LR NHA  G VD P +PA G    G +G GE GI G+VGPVE G+E+GEI+A
Subjt:  GKECLRSNHAIGGGVDGPSNPASGARRRGEKGNGERGIFGIVGPVEKGVEMGEILA

TrEMBL top hitse value%identityAlignment
A0A0A0K6W3 Uncharacterized protein4.9e-3458.67Show/hide
Query:  NTRFRVDRRSNLPDLVQRLSLWRNFDGDEDHQPAIGRFSSDVPEREGKRRRRKNRGVGRNVEGTDGGGVAGESGKECLRSNHAIGGGVDGPSNPASGARR
        NT   + RR NLP+LVQR  L R+F G+ED +  +GR    VPE +G+R  R N  +  NVE TD  G   ESG+E L S+HA GGGVDGP +P  G   
Subjt:  NTRFRVDRRSNLPDLVQRLSLWRNFDGDEDHQPAIGRFSSDVPEREGKRRRRKNRGVGRNVEGTDGGGVAGESGKECLRSNHAIGGGVDGPSNPASGARR

Query:  RGEKGNGERGIFGIVGPVEKGVEMGEILAMGEGSVGEGLRRASEGLGERK
        RGE+G+GERGIFGIV PVE+GVE+GEILA+GEGSV EGL RASEG+G+ K
Subjt:  RGEKGNGERGIFGIVGPVEKGVEMGEILAMGEGSVGEGLRRASEGLGERK

A0A443N7Y5 Mitochondrial import inner membrane translocase subunit Tim211.1e-0455.36Show/hide
Query:  GKECLRSNHAIGGGVDGPSNPASGARRRGEKGNGERGIFGIVGPVEKGVEMGEILA
        G + LR NHA  G VD P +PA G    G +G GE GI G+VGPVE G+E+GEI+A
Subjt:  GKECLRSNHAIGGGVDGPSNPASGARRRGEKGNGERGIFGIVGPVEKGVEMGEILA

A0A6A4M044 Uncharacterized protein (Fragment)1.0e-0741.13Show/hide
Query:  DRRSNLPDLVQRLSLWRNFDGDEDHQPAIGRFSSDVPEREGKRRRRKNRGVGRNVEGTDGGGVAGE--SGKECLRSNHAIGGGVDGPSNPASGARRRGEK
        DR +NLP+LV RL + R     ED   A+  F + V +   +     NR VG +V G D  G       G+E L + HA  G VDGP NP  G   R + 
Subjt:  DRRSNLPDLVQRLSLWRNFDGDEDHQPAIGRFSSDVPEREGKRRRRKNRGVGRNVEGTDGGGVAGE--SGKECLRSNHAIGGGVDGPSNPASGARRRGEK

Query:  GNGERGIFGIVGPVEKGVEMGEILAMGE-GSVGEGLRRASE
        G+GE G  G VGPVE+GVE+ ++ A+G    V EGL + SE
Subjt:  GNGERGIFGIVGPVEKGVEMGEILAMGE-GSVGEGLRRASE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCGCAGGAATACCAGATTTCGGGTCGACCGCCGGTCCAACTTGCCAGACTTGGTTCAACGACTTAGCCTTTGGCGGAACTTTGACGGTGACGAAGATCATCAACC
GGCCATCGGCAGATTCAGCAGCGACGTCCCAGAACGGGAAGGAAAGCGAAGGCGTAGGAAGAACAGAGGAGTAGGAAGAAATGTTGAAGGTACCGACGGTGGGGGCGTTG
CCGGAGAGAGTGGCAAGGAATGCCTGAGATCCAACCATGCCATTGGCGGTGGGGTTGATGGCCCAAGCAACCCAGCCTCCGGAGCGCGGCGGCGAGGCGAGAAAGGCAAT
GGAGAGAGAGGAATTTTTGGGATCGTGGGTCCAGTGGAGAAAGGCGTTGAGATGGGGGAGATCTTGGCAATGGGTGAAGGATCTGTTGGGGAAGGATTGAGAAGAGCAAG
TGAGGGATTGGGAGAGAGAAAGGAAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCGCAGGAATACCAGATTTCGGGTCGACCGCCGGTCCAACTTGCCAGACTTGGTTCAACGACTTAGCCTTTGGCGGAACTTTGACGGTGACGAAGATCATCAACC
GGCCATCGGCAGATTCAGCAGCGACGTCCCAGAACGGGAAGGAAAGCGAAGGCGTAGGAAGAACAGAGGAGTAGGAAGAAATGTTGAAGGTACCGACGGTGGGGGCGTTG
CCGGAGAGAGTGGCAAGGAATGCCTGAGATCCAACCATGCCATTGGCGGTGGGGTTGATGGCCCAAGCAACCCAGCCTCCGGAGCGCGGCGGCGAGGCGAGAAAGGCAAT
GGAGAGAGAGGAATTTTTGGGATCGTGGGTCCAGTGGAGAAAGGCGTTGAGATGGGGGAGATCTTGGCAATGGGTGAAGGATCTGTTGGGGAAGGATTGAGAAGAGCAAG
TGAGGGATTGGGAGAGAGAAAGGAAGGATGA
Protein sequenceShow/hide protein sequence
MRRRNTRFRVDRRSNLPDLVQRLSLWRNFDGDEDHQPAIGRFSSDVPEREGKRRRRKNRGVGRNVEGTDGGGVAGESGKECLRSNHAIGGGVDGPSNPASGARRRGEKGN
GERGIFGIVGPVEKGVEMGEILAMGEGSVGEGLRRASEGLGERKEG