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Lsi02G021590 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G021590
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionStructural maintenance of chromosomes protein
Genome locationchr02:28023837..28024688
RNA-Seq ExpressionLsi02G021590
SyntenyLsi02G021590
Gene Ontology termsGO:0007064 - mitotic sister chromatid cohesion (biological process)
GO:0051321 - meiotic cell cycle (biological process)
GO:0005634 - nucleus (cellular component)
GO:0008278 - cohesin complex (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AKU77148.1 structural maintenance of chromosomes protein 1, partial [Cucumis sativus]3.6e-2698.55Show/hide
Query:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEK
        MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREM LKESEASGRISGLEKKIQYAEIEK
Subjt:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEK
KAA0042015.1 structural maintenance of chromosomes protein 1 [Cucumis melo var. makuwa]8.6e-2898.61Show/hide
Query:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEKVIT
        MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREM LKESEASGRISGLEKKIQYAEIEKVIT
Subjt:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEKVIT
KAG6576027.1 Structural maintenance of chromosomes protein 1, partial [Cucurbita argyrosperma subsp. sororia]3.6e-2698.55Show/hide
Query:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEK
        MTGG SGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEK
Subjt:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEK
TYK17951.1 structural maintenance of chromosomes protein 1 [Cucumis melo var. makuwa]8.6e-2898.61Show/hide
Query:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEKVIT
        MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREM LKESEASGRISGLEKKIQYAEIEKVIT
Subjt:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEKVIT
XP_023549257.1 structural maintenance of chromosomes protein 1-like isoform X1 [Cucurbita pepo subsp. pepo]3.6e-2698.55Show/hide
Query:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEK
        MTGG SGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEK
Subjt:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEK
TrEMBL top hitse value%identityAlignment
A0A0A0KA44 SMC_N domain-containing protein1.7e-2698.55Show/hide
Query:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEK
        MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREM LKESEASGRISGLEKKIQYAEIEK
Subjt:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEK
A0A5A7TKR4 Structural maintenance of chromosomes protein 14.1e-2898.61Show/hide
Query:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEKVIT
        MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREM LKESEASGRISGLEKKIQYAEIEKVIT
Subjt:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEKVIT
A0A5D3D127 Structural maintenance of chromosomes protein 14.1e-2898.61Show/hide
Query:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEKVIT
        MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREM LKESEASGRISGLEKKIQYAEIEKVIT
Subjt:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEKVIT
A0A6J1GMW1 Structural maintenance of chromosomes protein1.7e-2698.55Show/hide
Query:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEK
        MTGG SGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEK
Subjt:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEK
A0A6J1JRD5 Structural maintenance of chromosomes protein1.7e-2698.55Show/hide
Query:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEK
        MTGG SGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEK
Subjt:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEK
SwissProt top hitse value%identityAlignment
Q6Q1P4 Structural maintenance of chromosomes protein 17.8e-2481.16Show/hide
Query:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEK
        MTGG SGGMEA+SNKWDDKKIEGLKK KE +E +L+ +GSIREMQ+KESE SG+ISGLEKKIQYAEIEK
Subjt:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEK
Arabidopsis top hitse value%identityAlignment
AT3G54670.1 Structural maintenance of chromosomes (SMC) family protein5.5e-2581.16Show/hide
Query:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEK
        MTGG SGGMEA+SNKWDDKKIEGLKK KE +E +L+ +GSIREMQ+KESE SG+ISGLEKKIQYAEIEK
Subjt:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEK
AT3G54670.3 Structural maintenance of chromosomes (SMC) family protein5.5e-2581.16Show/hide
Query:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEK
        MTGG SGGMEA+SNKWDDKKIEGLKK KE +E +L+ +GSIREMQ+KESE SG+ISGLEKKIQYAEIEK
Subjt:  MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGGGGGTATTAGTGGTGGCATGGAAGCAAGGTCAAACAAATGGGACGATAAAAAGATTGAAGGGCTTAAGAAAAAGAAAGAGCAGTATGAATCAGAGCTAGATGA
ACTTGGATCAATCAGAGAGATGCAACTGAAGGAGTCTGAAGCATCTGGGAGGATTAGTGGACTCGAGAAAAAGATTCAGTATGCGGAGATTGAGAAGGTGATTACCTGA
mRNA sequenceShow/hide mRNA sequence
TTTCCCTTTAAATAATTTTGAATGTGTGGTCTAAATTTTTTATTTTTAAGAAATGGAGATCCATTATCTGATGTTTCTATTGTGTTTGTGTAATTCTAAAATGCTAGTTA
GTATTGTTCTCTTAGTTTCATCTACTTCTTATGTATCATTGTAATTCGAGTATTAGACTTGTTTCATTTCATCAATGAAAAGCATTGTTTTTGTTTCCAAAAAAAAAAAG
AAAAATGTGAGTGGGTAATAGGCAAGAAGATCTATGAATTTGTATGCTTAACAATCACACTTGTGATTTTGAATTGGGGAAAGGCAATTTGTACGCTTAACAATAACACT
TTTGATTCGACATTGGAGAAGGCAATTATATTTGCTGTGGGGAATACTCTAGTTTGTGACAATCTTGATGAAGCCAAGGCTCTAAGCTGGAGTGGAGAAAGACATAAAGT
CGTAACTGTTGATGGTATTCTGCTTACAAAATCTGGCACGATGACTGGGGGTATTAGTGGTGGCATGGAAGCAAGGTCAAACAAATGGGACGATAAAAAGATTGAAGGGC
TTAAGAAAAAGAAAGAGCAGTATGAATCAGAGCTAGATGAACTTGGATCAATCAGAGAGATGCAACTGAAGGAGTCTGAAGCATCTGGGAGGATTAGTGGACTCGAGAAA
AAGATTCAGTATGCGGAGATTGAGAAGGTGATTACCTGA
Protein sequenceShow/hide protein sequence
MTGGISGGMEARSNKWDDKKIEGLKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAEIEKVIT