CuGenDBv2

Gene ID	Lsi02G021630
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic
Genome location	chr02:28049979..28057313
RNA-Seq Expression	Lsi02G021630
Synteny	Lsi02G021630
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0009658 - chloroplast organization (biological process) GO:0042644 - chloroplast nucleoid (cellular component)
InterPro domains	IPR038961 - Protein PEP-related development arrested 1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004150361.1 protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic [Cucumis sativus]

1.1e-187

93.65

Show/hide

Query:  MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYPEEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLE
        MNSSLRLFP+CSCSY+LPTNPKPT+L+FINNP HFLHLKR  RKQ LA CTSYEVGGGYP+EE DMQDRRRP KEVKPKMDTSEYEALLKGGDQVTSVLE
Subjt:  MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYPEEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLE

Query:  EMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELL
        EMIVLLEDTN DETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAE DQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLK+SRHELL
Subjt:  EMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELL

Query:  RRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV
        RRVAAGGGVFKSKNGTKVHIP ANLNDIANQADDL+ETMETRPIVPDRKLLARLVLIREEARNMMGGG+LDERNDRGL+TLPESEVNFLTKLVALKPGNV
Subjt:  RRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV

Query:  VQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKV
        VQEMIRNVMLGKDEGADNSGD+EED AGGRRAS+GI GRESVSGRKPLPVRPGMFLETVSKV
Subjt:  VQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKV

XP_008447229.1 PREDICTED: uncharacterized protein LOC103489722 [Cucumis melo]

1.5e-187

94.2

Show/hide

Query:  MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYPEEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLE
        MNSSLRLFP+CSCSY+LPTNPKPT+L+FINNP HFLHLKR KRKQ LA CTSYEVGGGYPEEE DMQD RRP KEVKPKMDTSEYEALLKGGDQVTSVLE
Subjt:  MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYPEEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLE

Query:  EMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELL
        EMIVLLEDTN DETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQ AE DQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELL
Subjt:  EMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELL

Query:  RRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV
        RRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDL+ETMETRPIVPDRKLLARLVLIREEARNMMGGG+LDERNDRGLSTLPESEVNFLTKLVALKPGNV
Subjt:  RRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV

Query:  VQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKV
        VQEMIRNVMLGKDEGADNSGD+EE  AGGRR SRGI GRESVSGRKPLPVRPGMFLETVSKV
Subjt:  VQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKV

XP_038898239.1 protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X1 [Benincasa hispida]

1.5e-187

90.86

Show/hide

Query:  MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYPEEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLE
        MNSSLRLFPTCSCS RLPTNPKPTSLFFINNP HFLHLKRAKRKQQLA CTSYEVGGGYPEEELDMQDRRRP KEVKPKMD+SEYEALLKGGDQVTSVLE
Subjt:  MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYPEEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLE

Query:  EMIVL---------------------LEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPP
        EMIVL                     LEDTN DETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAE DQDDKRKAILEVVKETVLSHLTKKCPP
Subjt:  EMIVL---------------------LEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPP

Query:  HVQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLS
        HVQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDL+ETMETRPIVPDRKLLARLVLIREEARNMMGGG+LDERNDRGLS
Subjt:  HVQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLS

Query:  TLPESEVNFLTKLVALKPGNVVQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKV
        TLPESEVNFLTKLVALKPGNVVQEMIRNVMLGKDEGADNSGDD+ED AGGRRASRGI+GR SVSG+KPLPVRPGMFLETVSKV
Subjt:  TLPESEVNFLTKLVALKPGNVVQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKV

XP_038898240.1 protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X2 [Benincasa hispida]

1.1e-187

91.1

Show/hide

Query:  MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYPEEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLE
        MNSSLRLFPTCSCS RLPTNPKPTSLFFINNP HFLHLKRAKRKQQLA CTSYEVGGGYPEEELDMQDRRRP KEVKPKMD+SEYEALLKGGDQVTSVLE
Subjt:  MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYPEEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLE

Query:  EMIVL--------------------LEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPH
        EMIVL                    LEDTN DETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAE DQDDKRKAILEVVKETVLSHLTKKCPPH
Subjt:  EMIVL--------------------LEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPH

Query:  VQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLST
        VQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDL+ETMETRPIVPDRKLLARLVLIREEARNMMGGG+LDERNDRGLST
Subjt:  VQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLST

Query:  LPESEVNFLTKLVALKPGNVVQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKV
        LPESEVNFLTKLVALKPGNVVQEMIRNVMLGKDEGADNSGDD+ED AGGRRASRGI+GR SVSG+KPLPVRPGMFLETVSKV
Subjt:  LPESEVNFLTKLVALKPGNVVQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKV

XP_038898241.1 protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X3 [Benincasa hispida]

2.9e-191

96.13

Show/hide

Query:  MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYPEEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLE
        MNSSLRLFPTCSCS RLPTNPKPTSLFFINNP HFLHLKRAKRKQQLA CTSYEVGGGYPEEELDMQDRRRP KEVKPKMD+SEYEALLKGGDQVTSVLE
Subjt:  MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYPEEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLE

Query:  EMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELL
        EMIVLLEDTN DETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAE DQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELL
Subjt:  EMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELL

Query:  RRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV
        RRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDL+ETMETRPIVPDRKLLARLVLIREEARNMMGGG+LDERNDRGLSTLPESEVNFLTKLVALKPGNV
Subjt:  RRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV

Query:  VQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKV
        VQEMIRNVMLGKDEGADNSGDD+ED AGGRRASRGI+GR SVSG+KPLPVRPGMFLETVSKV
Subjt:  VQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K6Y5 Uncharacterized protein

5.6e-188

93.65

Show/hide

Query:  MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYPEEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLE
        MNSSLRLFP+CSCSY+LPTNPKPT+L+FINNP HFLHLKR  RKQ LA CTSYEVGGGYP+EE DMQDRRRP KEVKPKMDTSEYEALLKGGDQVTSVLE
Subjt:  MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYPEEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLE

Query:  EMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELL
        EMIVLLEDTN DETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAE DQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLK+SRHELL
Subjt:  EMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELL

Query:  RRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV
        RRVAAGGGVFKSKNGTKVHIP ANLNDIANQADDL+ETMETRPIVPDRKLLARLVLIREEARNMMGGG+LDERNDRGL+TLPESEVNFLTKLVALKPGNV
Subjt:  RRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV

Query:  VQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKV
        VQEMIRNVMLGKDEGADNSGD+EED AGGRRAS+GI GRESVSGRKPLPVRPGMFLETVSKV
Subjt:  VQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKV

A0A1S3BHT4 uncharacterized protein LOC103489722

7.3e-188

94.2

Show/hide

Query:  MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYPEEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLE
        MNSSLRLFP+CSCSY+LPTNPKPT+L+FINNP HFLHLKR KRKQ LA CTSYEVGGGYPEEE DMQD RRP KEVKPKMDTSEYEALLKGGDQVTSVLE
Subjt:  MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYPEEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLE

Query:  EMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELL
        EMIVLLEDTN DETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQ AE DQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELL
Subjt:  EMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELL

Query:  RRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV
        RRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDL+ETMETRPIVPDRKLLARLVLIREEARNMMGGG+LDERNDRGLSTLPESEVNFLTKLVALKPGNV
Subjt:  RRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV

Query:  VQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKV
        VQEMIRNVMLGKDEGADNSGD+EE  AGGRR SRGI GRESVSGRKPLPVRPGMFLETVSKV
Subjt:  VQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKV

A0A5D3D3S5 Uncharacterized protein

7.3e-188

94.2

Show/hide

Query:  MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYPEEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLE
        MNSSLRLFP+CSCSY+LPTNPKPT+L+FINNP HFLHLKR KRKQ LA CTSYEVGGGYPEEE DMQD RRP KEVKPKMDTSEYEALLKGGDQVTSVLE
Subjt:  MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYPEEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLE

Query:  EMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELL
        EMIVLLEDTN DETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQ AE DQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELL
Subjt:  EMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELL

Query:  RRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV
        RRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDL+ETMETRPIVPDRKLLARLVLIREEARNMMGGG+LDERNDRGLSTLPESEVNFLTKLVALKPGNV
Subjt:  RRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV

Query:  VQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKV
        VQEMIRNVMLGKDEGADNSGD+EE  AGGRR SRGI GRESVSGRKPLPVRPGMFLETVSKV
Subjt:  VQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKV

A0A6J1H6Q1 protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X2

7.0e-183

88.39

Show/hide

Query:  MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYPEEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLE
        MNSSLRLFPTC CS RLPT PKP+SL FI+NP+HF HLK AKRKQQLA CTSYEVGGGYPEE+LDMQDRRR RKE  PKMDTSEYEALLKGGDQVTSVLE
Subjt:  MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYPEEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLE

Query:  EMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELL
        EMI++LEDTNTDE SEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAE DQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELL
Subjt:  EMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELL

Query:  RRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV
        RRVAAGGG F SKNGTKVHIPGANLNDIANQADDLVETMETRP+VPDRKLLARLVLIREEARNMMGGG+LDERNDRGLSTLPESEVNFLTKLVALKPGNV
Subjt:  RRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV

Query:  VQEMIRNVMLGKDEGADNSGDDEEDA--AGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKVRFLLVCSHLMDSDGL
        V+EMI+NVMLGKDEGAD+ GDDEED   AGG+RASRGI+GRESVSGRKPLPVRPGMFLETVSK   L++ S   ++ G+
Subjt:  VQEMIRNVMLGKDEGADNSGDDEEDA--AGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKVRFLLVCSHLMDSDGL

A0A6J1KT24 protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X2

1.9e-183

88.65

Show/hide

Query:  MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYPEEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLE
        MNSSLRLFPTC CS RLPT PKPTSL FI+NP+HF HLK AKRKQQLA CTSYEVGGGYPEE+LDMQDRRR RKE  PKMDTSEYEALLKGGDQVTSVLE
Subjt:  MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYPEEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLE

Query:  EMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELL
        EMI++LEDTNTDE SEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAE DQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELL
Subjt:  EMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELL

Query:  RRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV
        RRVAAGGG FKSKNGTKVHIPGANLNDIANQADDLVETMETRP+VPDRKLLARLVLIREEARNMMGGG+LDERN+RGLSTLPESEVNFLTKLVALKPGNV
Subjt:  RRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV

Query:  VQEMIRNVMLGKDEGADNSGDDEEDA--AGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKVRFLLVCSHLMDSDGL
        V+EMI+NVMLGKDEGAD+ GDDEED   AGG+RASRGI+GRESVSGRKPLPVRPGMFLETVSK   L++ S   ++ G+
Subjt:  VQEMIRNVMLGKDEGADNSGDDEEDA--AGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKVRFLLVCSHLMDSDGL

SwissProt top hits

e value

%identity

Alignment

Q1H5E9 Protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic

6.4e-133

75.47

Show/hide

Query:  KRKQQLALCTSYEVGGGYPEEEL-DMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFM
        K K+ +  C  YEVGGGY +EEL +    ++ +  VK K+D +EYEALLKGG+QVTSVLEEMI LLED   +E SE +A++LAAQGVIGKRVDEMESGFM
Subjt:  KRKQQLALCTSYEVGGGYPEEEL-DMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFM

Query:  MALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETME
        MALDYMIQ+A+ DQD+KRK++LEVVKETVLSHLTKKCPPHVQV+GLLCRTP KESRHELLRRVAAGGG F+S+NGTK+HIPGANLNDIANQADDL+ETME
Subjt:  MALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETME

Query:  TRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNVVQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRE
        TRP +PDRKLLARLVLIREEARNMMGGG+LDERNDRG +TLPESEVNFL KLVALKPG  VQ+MI+NVM GKDEGADN   +++ +  GR+ S G++GR 
Subjt:  TRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNVVQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRE

Query:  SVSGRKPLPVRPGMFLETVSKV
        SV+GRKPLPVRPGMFLETV+KV
Subjt:  SVSGRKPLPVRPGMFLETVSKV

Q53K52 Protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic

2.1e-107

70.77

Show/hide

Query:  KMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCP
        K D +E +ALL+GG+QV SVL+EM+ L+ED   D + E +A++L AQGVIGKRVDEMESGF+MALDYMIQ+AE D D++RK++LEVVK+TVL HLTKKCP
Subjt:  KMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCP

Query:  PHVQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGL
        PHVQVVGLLC+T  K+SRHELLRRVAAGGGVFK+  G K  IPGANLNDIANQADDL+E+ME+RP +PDRKLLARLV++REEARNMMGGGLLDERNDRG 
Subjt:  PHVQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGL

Query:  STLPESEVNFLTKLVALKPGNVVQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKV
        +TLPE+EVNFL+KLVALKPG  ++ MI++VM GK EGADN  +             GISGR SV+G KP PVRPGMFLETVSKV
Subjt:  STLPESEVNFLTKLVALKPGNVVQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKV

Arabidopsis top hits

e value

%identity

Alignment

AT5G48470.1 unknown protein

4.6e-134

75.47

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Query:  KRKQQLALCTSYEVGGGYPEEEL-DMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFM
        K K+ +  C  YEVGGGY +EEL +    ++ +  VK K+D +EYEALLKGG+QVTSVLEEMI LLED   +E SE +A++LAAQGVIGKRVDEMESGFM
Subjt:  KRKQQLALCTSYEVGGGYPEEEL-DMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFM

Query:  MALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETME
        MALDYMIQ+A+ DQD+KRK++LEVVKETVLSHLTKKCPPHVQV+GLLCRTP KESRHELLRRVAAGGG F+S+NGTK+HIPGANLNDIANQADDL+ETME
Subjt:  MALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETME

Query:  TRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNVVQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRE
        TRP +PDRKLLARLVLIREEARNMMGGG+LDERNDRG +TLPESEVNFL KLVALKPG  VQ+MI+NVM GKDEGADN   +++ +  GR+ S G++GR 
Subjt:  TRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNVVQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRE

Query:  SVSGRKPLPVRPGMFLETVSKV
        SV+GRKPLPVRPGMFLETV+KV
Subjt:  SVSGRKPLPVRPGMFLETVSKV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAACAGCAGCCTCCGGCTGTTTCCAACTTGTTCGTGTTCATACCGACTACCCACAAATCCGAAACCAACTTCGCTGTTTTTCATCAACAATCCTGCCCACTTTCTGCA
TTTGAAGCGAGCCAAGAGGAAGCAGCAATTAGCATTGTGTACCAGTTATGAAGTCGGTGGAGGTTATCCGGAGGAGGAGTTGGATATGCAAGATAGAAGACGACCCAGAA
AAGAAGTGAAGCCGAAAATGGACACTTCCGAGTACGAAGCTCTCCTTAAAGGAGGCGACCAAGTCACATCGGTTCTTGAAGAGATGATTGTCCTCTTGGAAGATACGAAC
ACTGATGAAACATCTGAAGAGATAGCTTTGCAGTTGGCTGCACAAGGTGTCATAGGTAAAAGGGTTGATGAGATGGAGTCAGGATTTATGATGGCCTTAGACTACATGAT
CCAGATTGCTGAAAATGACCAAGATGATAAGCGCAAGGCAATACTGGAGGTGGTGAAGGAGACAGTTCTATCTCATCTCACAAAAAAATGCCCGCCCCATGTTCAAGTGG
TCGGCCTACTTTGTAGGACTCCATTGAAAGAAAGCAGACATGAACTACTTCGAAGAGTTGCTGCTGGGGGTGGTGTCTTTAAAAGTAAAAATGGCACCAAAGTTCATATC
CCAGGAGCAAATCTTAACGACATTGCCAACCAAGCTGATGATTTAGTAGAGACAATGGAAACTCGGCCAATTGTACCTGATCGAAAACTGCTTGCAAGGCTTGTTCTGAT
TAGAGAAGAGGCTCGGAATATGATGGGAGGTGGACTTCTGGATGAAAGAAATGATCGTGGTCTAAGTACTCTTCCTGAATCAGAGGTGAACTTCTTGACCAAACTGGTTG
CTTTGAAACCAGGGAATGTTGTCCAGGAGATGATACGAAATGTAATGTTAGGTAAAGATGAAGGGGCCGATAACTCAGGTGATGATGAGGAAGATGCTGCAGGTGGTCGG
AGGGCTTCAAGGGGAATTTCAGGAAGGGAAAGTGTTTCGGGGCGGAAGCCACTTCCAGTTCGTCCAGGCATGTTTCTAGAAACTGTATCCAAGGTAAGATTCTTGCTTGT
TTGTAGTCATTTAATGGATTCTGATGGATTGTTATGTGATCGTGACCTGATGATCTAA

mRNA sequence

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TTTTGCACGATGGAGTAGCAAGAGAAACCGTAAAATTACTTCAAATCTATAACCAACCAATGATAGAAACAATGTTTCCCAATCTTGTGCACCAGCAGCACTTCAAACTT
CACCCAAAAACGGATAAACCTTAAACCCAAAGATCCAAGCTAAAACCCCAGCCATATTTTCAATTGAGCAACCAATTCAAGAAGATGAACAGCAGCCTCCGGCTGTTTCC
AACTTGTTCGTGTTCATACCGACTACCCACAAATCCGAAACCAACTTCGCTGTTTTTCATCAACAATCCTGCCCACTTTCTGCATTTGAAGCGAGCCAAGAGGAAGCAGC
AATTAGCATTGTGTACCAGTTATGAAGTCGGTGGAGGTTATCCGGAGGAGGAGTTGGATATGCAAGATAGAAGACGACCCAGAAAAGAAGTGAAGCCGAAAATGGACACT
TCCGAGTACGAAGCTCTCCTTAAAGGAGGCGACCAAGTCACATCGGTTCTTGAAGAGATGATTGTCCTCTTGGAAGATACGAACACTGATGAAACATCTGAAGAGATAGC
TTTGCAGTTGGCTGCACAAGGTGTCATAGGTAAAAGGGTTGATGAGATGGAGTCAGGATTTATGATGGCCTTAGACTACATGATCCAGATTGCTGAAAATGACCAAGATG
ATAAGCGCAAGGCAATACTGGAGGTGGTGAAGGAGACAGTTCTATCTCATCTCACAAAAAAATGCCCGCCCCATGTTCAAGTGGTCGGCCTACTTTGTAGGACTCCATTG
AAAGAAAGCAGACATGAACTACTTCGAAGAGTTGCTGCTGGGGGTGGTGTCTTTAAAAGTAAAAATGGCACCAAAGTTCATATCCCAGGAGCAAATCTTAACGACATTGC
CAACCAAGCTGATGATTTAGTAGAGACAATGGAAACTCGGCCAATTGTACCTGATCGAAAACTGCTTGCAAGGCTTGTTCTGATTAGAGAAGAGGCTCGGAATATGATGG
GAGGTGGACTTCTGGATGAAAGAAATGATCGTGGTCTAAGTACTCTTCCTGAATCAGAGGTGAACTTCTTGACCAAACTGGTTGCTTTGAAACCAGGGAATGTTGTCCAG
GAGATGATACGAAATGTAATGTTAGGTAAAGATGAAGGGGCCGATAACTCAGGTGATGATGAGGAAGATGCTGCAGGTGGTCGGAGGGCTTCAAGGGGAATTTCAGGAAG
GGAAAGTGTTTCGGGGCGGAAGCCACTTCCAGTTCGTCCAGGCATGTTTCTAGAAACTGTATCCAAGGTAAGATTCTTGCTTGTTTGTAGTCATTTAATGGATTCTGATG
GATTGTTATGTGATCGTGACCTGATGATCTAAAGTTT

Protein sequence

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MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYPEEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTN
TDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHI
PGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNVVQEMIRNVMLGKDEGADNSGDDEEDAAGGR
RASRGISGRESVSGRKPLPVRPGMFLETVSKVRFLLVCSHLMDSDGLLCDRDLMI

Lsi02G021630 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome